| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fliY [H]
Identifier: 157370161
GI number: 157370161
Start: 2102042
End: 2102947
Strand: Reverse
Name: fliY [H]
Synonym: Spro_1919
Alternate gene names: 157370161
Gene position: 2102947-2102042 (Counterclockwise)
Preceding gene: 157370171
Following gene: 157370159
Centisome position: 38.59
GC content: 58.28
Gene sequence:
>906_bases ATGCGATGCAAAACCCTGGTACTGAGCGCGCTGCTGCTGTGCGGCCATGTAGCGGCTAAAACCAAAAGCATTATTGACCT GCAGGCTAATCAGCAACATTTGCGTGCAGCGAAAAACCCGGCCGCGGTGGCACTGATCCCGGCGAATTACCCTTTTGCCG TGCCGGGCAAGCTGACCGTAGCGGTGGCGTCTGAAAACTCCCCGCCGCTGGCGCTGTTTGCCGAAGACAATAAAACGCTG ATTGGCAGCGACCCGGATATTGCACAACTGGTGGCGGACAGCCTGGGGCTGGAACTGAATCTGGTGCCCACCTCCTGGGA GGACTGGCCGCTCGGGATCAGTTCGGGCAAGTACGATGCCGCCATTTTCAATATTGCCGTAACCAAACTGCGCAAGACCA AGTTTGATTTTGCCACCTACCGCGTGGATACGCTGGGGTTTTATGTGAAATCCACCAGCAAAATCACCTCAATCAACCAA CCTGCGGACATTGCCGGGCTGCGGGTTATTGTCGGCTCGGGGACTAATCAGGAAAATATCCTGCTTGGCTGGGATAAACA GAACCGCGCCAACGGCCTGGCGCCGGTGCAACCGATTTATGTCACCGACGATGCCGCCGCCAACCTGAGCATTCAGTCTG GACGCGTCGACGCCTTCTTCGGCCCCCACTCTACCGGCGCCTACAAGGCGGCACTGACCGGCAAAACCAAAATGGTCGGC ATTGGCCCGAACGTGGCCTATGTGGCGGTGACCACCAAAAAAGATAACGGTCTGGTTGCGGCCATCAATGCCGCCATCAA TGGGGTGATCGCCAGCGGCGAGTACGGCCAGGTGCTGGACCGTTGGGGCGAGCGCGATGAGAAGGTCCCACGCTCTACCA TCAACCCGCCGGGCATTGGCGACTAA
Upstream 100 bases:
>100_bases CATCTGATTTTTTTCACTTTGGTTATTCACTAATGTTGCTTTACTTGCCTGTTGCCGCCGCCAATAGTAACCCTATGATT AAAAACGGATAGGTAACCAC
Downstream 100 bases:
>100_bases GCTTCTATCAACTGGGGTGCGTGTGTGCGCATCCAGTTGGCCAACGAGTCGAGCGTCGGGCGCAGCGTTTTGCCCAGCGG CGTAATCTGGTATTCAACAC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRCKTLVLSALLLCGHVAAKTKSIIDLQANQQHLRAAKNPAAVALIPANYPFAVPGKLTVAVASENSPPLALFAEDNKTL IGSDPDIAQLVADSLGLELNLVPTSWEDWPLGISSGKYDAAIFNIAVTKLRKTKFDFATYRVDTLGFYVKSTSKITSINQ PADIAGLRVIVGSGTNQENILLGWDKQNRANGLAPVQPIYVTDDAAANLSIQSGRVDAFFGPHSTGAYKAALTGKTKMVG IGPNVAYVAVTTKKDNGLVAAINAAINGVIASGEYGQVLDRWGERDEKVPRSTINPPGIGD
Sequences:
>Translated_301_residues MRCKTLVLSALLLCGHVAAKTKSIIDLQANQQHLRAAKNPAAVALIPANYPFAVPGKLTVAVASENSPPLALFAEDNKTL IGSDPDIAQLVADSLGLELNLVPTSWEDWPLGISSGKYDAAIFNIAVTKLRKTKFDFATYRVDTLGFYVKSTSKITSINQ PADIAGLRVIVGSGTNQENILLGWDKQNRANGLAPVQPIYVTDDAAANLSIQSGRVDAFFGPHSTGAYKAALTGKTKMVG IGPNVAYVAVTTKKDNGLVAAINAAINGVIASGEYGQVLDRWGERDEKVPRSTINPPGIGD >Mature_301_residues MRCKTLVLSALLLCGHVAAKTKSIIDLQANQQHLRAAKNPAAVALIPANYPFAVPGKLTVAVASENSPPLALFAEDNKTL IGSDPDIAQLVADSLGLELNLVPTSWEDWPLGISSGKYDAAIFNIAVTKLRKTKFDFATYRVDTLGFYVKSTSKITSINQ PADIAGLRVIVGSGTNQENILLGWDKQNRANGLAPVQPIYVTDDAAANLSIQSGRVDAFFGPHSTGAYKAALTGKTKMVG IGPNVAYVAVTTKKDNGLVAAINAAINGVIASGEYGQVLDRWGERDEKVPRSTINPPGIGD
Specific function: Part of a binding-protein-dependent transport system for cystine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=166, Percent_Identity=31.9277108433735, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 31825; Mature: 31825
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCKTLVLSALLLCGHVAAKTKSIIDLQANQQHLRAAKNPAAVALIPANYPFAVPGKLTV CCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCEEEEEECCCCEECCCEEEE AVASENSPPLALFAEDNKTLIGSDPDIAQLVADSLGLELNLVPTSWEDWPLGISSGKYDA EEECCCCCCEEEEECCCCEEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCE AIFNIAVTKLRKTKFDFATYRVDTLGFYVKSTSKITSINQPADIAGLRVIVGSGTNQENI EEEEEEHHHHHHCCCCEEEEEEEEEEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCCE LLGWDKQNRANGLAPVQPIYVTDDAAANLSIQSGRVDAFFGPHSTGAYKAALTGKTKMVG EEEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCEEEEECCCCCCCEEEEECCCEEEEE IGPNVAYVAVTTKKDNGLVAAINAAINGVIASGEYGQVLDRWGERDEKVPRSTINPPGIG ECCCEEEEEEEEECCCCEEEEEEEEECEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC D C >Mature Secondary Structure MRCKTLVLSALLLCGHVAAKTKSIIDLQANQQHLRAAKNPAAVALIPANYPFAVPGKLTV CCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCEEEEEECCCCEECCCEEEE AVASENSPPLALFAEDNKTLIGSDPDIAQLVADSLGLELNLVPTSWEDWPLGISSGKYDA EEECCCCCCEEEEECCCCEEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCE AIFNIAVTKLRKTKFDFATYRVDTLGFYVKSTSKITSINQPADIAGLRVIVGSGTNQENI EEEEEEHHHHHHCCCCEEEEEEEEEEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCCE LLGWDKQNRANGLAPVQPIYVTDDAAANLSIQSGRVDAFFGPHSTGAYKAALTGKTKMVG EEEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCEEEEECCCCCCCEEEEECCCEEEEE IGPNVAYVAVTTKKDNGLVAAINAAINGVIASGEYGQVLDRWGERDEKVPRSTINPPGIG ECCCEEEEEEEEECCCCEEEEEEEEECEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]