| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hemA [H]
Identifier: 157370072
GI number: 157370072
Start: 2012865
End: 2014076
Strand: Reverse
Name: hemA [H]
Synonym: Spro_1830
Alternate gene names: 157370072
Gene position: 2014076-2012865 (Counterclockwise)
Preceding gene: 157370073
Following gene: 157370071
Centisome position: 36.96
GC content: 57.67
Gene sequence:
>1212_bases ATGAGCGTATTAAACATTCTTGAAGAAAAACTGGCCGAAACCAAAAGACAGGGCCGCTTCCGTGAGTTCCTCAATCTGGA ACGCAGCGTGCTGGACAAACCCTGGGCCACCAGCCACGGTCAGAACGGTGAGCGCCGTCTGAACGTCTGGTGTTCCAATG ACTATCTGGCGATGAGCCATCACCCTAAAGTCATTCTGGCCACCACCGAAGCGGTGAACCGCGTCGGGCTGGGCACCTGC GGCGCACGCAGCATTTCCGGCACTTCTGTCTATCACAGTGAATTGGAAACCCTGTTGGCCAGCGCCTATGGCAAAGAGTC GGCGCTGCTGTTTACCACCGGCTTCGGTGCCAATGACGCCACCTTGTCCACCCTGTGTGATGCCATTCCCGATCTGATTG TGTTTTCCGATGAGCTGAACCACGCCTCGATGATTTACGGCATCCGTTACAGCAAGGCGGAGAAAAAGATCTTCCGCCAC AATGACGTAGCCCATCTGGCCGAGCTGCTGCAGGCCGCCGACCCGCATCGGCCCAAACTGATCGCCTTCGAGTCGCTTTA TTCAATGGACGGCGACTTTGCCCCACTGGCACAAATTGTGGAATTGGCTGAGAAATATCAGGCGCTGACCTATCTGGACG AGATCCACTCTGCCGGCGTTTACGGTCATCGCGGGTTGGGCTATGCCGAACAACTTGGCCTGTTGGACAAAATCACCATT ATCCAGGGCGGTTTTGGCAAATCTTACGGCGCTGCCGGTGGCTACATCGCCGCCCCGCGCGTGGTGGTTGAAGCGGTGCG TAGCTGGTCGCCAGCGTTTGTCTTCAGCACCTCGTCCCCGGCTCCGGTGGTGGCGGCCGCGCTGGCCAGCTTCAAATACA ACCTGGAGCATGACAATCAGCGCAAGCATCTGCTGGCGATCATCGACCACTTGAAGTCCGGCCTGCGCGACGCCGGCATT CCGCTGGTTTCGGAGGACAGCCACATTCTGCCGGTGCTGGTCGGCGATCCACACCGCAACAAGCACATCAGCAAACAACT GCTCGATGAGTACGATATTTACGTGCAGCCGGTGAACGCGCCAACGGTTCCGGCCGGTAGCGAGCGTTTGCGCGTTACGC CGACCTCTGCCCATACTCATGAGGACGTGGAATATTTCCTGGCGGCGTTAAGCAAAGTCTGGGCTGCCAATCAGTTACGG AGAGCAGGATGA
Upstream 100 bases:
>100_bases GCATACCCGGCAATTAAACCATGCGCTGGTGACAATGTGTGTCGGTGTCGGCCAGGGTGTTTCATTGGTCATTAAAGCCC TCTAATGCAAGGAATTCCGT
Downstream 100 bases:
>100_bases AGTTGACGGACTATAACGGCCATTTTCTTACGCTGTGCCTGATGGCGACCGGCACCTTTGCCATCGGGACCGACGCGTTT ATTGTCGCCGGTATCCTCGA
Product: 5-aminolevulinate synthase
Products: NA
Alternate protein names: 5-aminolevulinic acid synthase; Delta-ALA synthase; Delta-aminolevulinate synthase [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSVLNILEEKLAETKRQGRFREFLNLERSVLDKPWATSHGQNGERRLNVWCSNDYLAMSHHPKVILATTEAVNRVGLGTC GARSISGTSVYHSELETLLASAYGKESALLFTTGFGANDATLSTLCDAIPDLIVFSDELNHASMIYGIRYSKAEKKIFRH NDVAHLAELLQAADPHRPKLIAFESLYSMDGDFAPLAQIVELAEKYQALTYLDEIHSAGVYGHRGLGYAEQLGLLDKITI IQGGFGKSYGAAGGYIAAPRVVVEAVRSWSPAFVFSTSSPAPVVAAALASFKYNLEHDNQRKHLLAIIDHLKSGLRDAGI PLVSEDSHILPVLVGDPHRNKHISKQLLDEYDIYVQPVNAPTVPAGSERLRVTPTSAHTHEDVEYFLAALSKVWAANQLR RAG
Sequences:
>Translated_403_residues MSVLNILEEKLAETKRQGRFREFLNLERSVLDKPWATSHGQNGERRLNVWCSNDYLAMSHHPKVILATTEAVNRVGLGTC GARSISGTSVYHSELETLLASAYGKESALLFTTGFGANDATLSTLCDAIPDLIVFSDELNHASMIYGIRYSKAEKKIFRH NDVAHLAELLQAADPHRPKLIAFESLYSMDGDFAPLAQIVELAEKYQALTYLDEIHSAGVYGHRGLGYAEQLGLLDKITI IQGGFGKSYGAAGGYIAAPRVVVEAVRSWSPAFVFSTSSPAPVVAAALASFKYNLEHDNQRKHLLAIIDHLKSGLRDAGI PLVSEDSHILPVLVGDPHRNKHISKQLLDEYDIYVQPVNAPTVPAGSERLRVTPTSAHTHEDVEYFLAALSKVWAANQLR RAG >Mature_402_residues SVLNILEEKLAETKRQGRFREFLNLERSVLDKPWATSHGQNGERRLNVWCSNDYLAMSHHPKVILATTEAVNRVGLGTCG ARSISGTSVYHSELETLLASAYGKESALLFTTGFGANDATLSTLCDAIPDLIVFSDELNHASMIYGIRYSKAEKKIFRHN DVAHLAELLQAADPHRPKLIAFESLYSMDGDFAPLAQIVELAEKYQALTYLDEIHSAGVYGHRGLGYAEQLGLLDKITII QGGFGKSYGAAGGYIAAPRVVVEAVRSWSPAFVFSTSSPAPVVAAALASFKYNLEHDNQRKHLLAIIDHLKSGLRDAGIP LVSEDSHILPVLVGDPHRNKHISKQLLDEYDIYVQPVNAPTVPAGSERLRVTPTSAHTHEDVEYFLAALSKVWAANQLRR AG
Specific function: Unknown
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI83977444, Length=396, Percent_Identity=42.6767676767677, Blast_Score=331, Evalue=7e-91, Organism=Homo sapiens, GI83977440, Length=396, Percent_Identity=42.6767676767677, Blast_Score=331, Evalue=9e-91, Organism=Homo sapiens, GI83977442, Length=396, Percent_Identity=42.6767676767677, Blast_Score=331, Evalue=1e-90, Organism=Homo sapiens, GI4502025, Length=393, Percent_Identity=42.4936386768448, Blast_Score=325, Evalue=5e-89, Organism=Homo sapiens, GI40316939, Length=393, Percent_Identity=42.4936386768448, Blast_Score=325, Evalue=5e-89, Organism=Homo sapiens, GI7657118, Length=345, Percent_Identity=36.231884057971, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI284448556, Length=345, Percent_Identity=36.231884057971, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI4758668, Length=393, Percent_Identity=30.0254452926209, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI119220554, Length=342, Percent_Identity=32.7485380116959, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI5454084, Length=255, Percent_Identity=30.9803921568627, Blast_Score=118, Evalue=1e-26, Organism=Escherichia coli, GI1790046, Length=390, Percent_Identity=34.1025641025641, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI1786993, Length=342, Percent_Identity=34.7953216374269, Blast_Score=186, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71994529, Length=390, Percent_Identity=32.8205128205128, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17560912, Length=341, Percent_Identity=33.1378299120235, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17560914, Length=341, Percent_Identity=33.1378299120235, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI32566772, Length=385, Percent_Identity=27.7922077922078, Blast_Score=150, Evalue=9e-37, Organism=Caenorhabditis elegans, GI71982617, Length=262, Percent_Identity=28.2442748091603, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71982625, Length=262, Percent_Identity=28.2442748091603, Blast_Score=107, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6320438, Length=422, Percent_Identity=39.8104265402844, Blast_Score=323, Evalue=2e-89, Organism=Saccharomyces cerevisiae, GI6320267, Length=344, Percent_Identity=32.5581395348837, Blast_Score=166, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6323954, Length=258, Percent_Identity=28.2945736434109, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI17137420, Length=398, Percent_Identity=42.2110552763819, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI24662918, Length=389, Percent_Identity=33.6760925449871, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI17136286, Length=386, Percent_Identity=30.0518134715026, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI24653280, Length=267, Percent_Identity=28.8389513108614, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24653276, Length=267, Percent_Identity=28.8389513108614, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24653278, Length=267, Percent_Identity=28.8389513108614, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010961 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.37 [H]
Molecular weight: Translated: 44210; Mature: 44078
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLNILEEKLAETKRQGRFREFLNLERSVLDKPWATSHGQNGERRLNVWCSNDYLAMSH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEECC HPKVILATTEAVNRVGLGTCGARSISGTSVYHSELETLLASAYGKESALLFTTGFGANDA CCEEEEEEHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH TLSTLCDAIPDLIVFSDELNHASMIYGIRYSKAEKKIFRHNDVAHLAELLQAADPHRPKL HHHHHHHHHHHHEEECCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCE IAFESLYSMDGDFAPLAQIVELAEKYQALTYLDEIHSAGVYGHRGLGYAEQLGLLDKITI EEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHEEEE IQGGFGKSYGAAGGYIAAPRVVVEAVRSWSPAFVFSTSSPAPVVAAALASFKYNLEHDNQ EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHEECCCCCCC RKHLLAIIDHLKSGLRDAGIPLVSEDSHILPVLVGDPHRNKHISKQLLDEYDIYVQPVNA HHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCC PTVPAGSERLRVTPTSAHTHEDVEYFLAALSKVWAANQLRRAG CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVLNILEEKLAETKRQGRFREFLNLERSVLDKPWATSHGQNGERRLNVWCSNDYLAMSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEECC HPKVILATTEAVNRVGLGTCGARSISGTSVYHSELETLLASAYGKESALLFTTGFGANDA CCEEEEEEHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH TLSTLCDAIPDLIVFSDELNHASMIYGIRYSKAEKKIFRHNDVAHLAELLQAADPHRPKL HHHHHHHHHHHHEEECCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCE IAFESLYSMDGDFAPLAQIVELAEKYQALTYLDEIHSAGVYGHRGLGYAEQLGLLDKITI EEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHEEEE IQGGFGKSYGAAGGYIAAPRVVVEAVRSWSPAFVFSTSSPAPVVAAALASFKYNLEHDNQ EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHEECCCCCCC RKHLLAIIDHLKSGLRDAGIPLVSEDSHILPVLVGDPHRNKHISKQLLDEYDIYVQPVNA HHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCC PTVPAGSERLRVTPTSAHTHEDVEYFLAALSKVWAANQLRRAG CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2034217 [H]