| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pbuE [H]
Identifier: 157370071
GI number: 157370071
Start: 2011696
End: 2012868
Strand: Reverse
Name: pbuE [H]
Synonym: Spro_1829
Alternate gene names: 157370071
Gene position: 2012868-2011696 (Counterclockwise)
Preceding gene: 157370072
Following gene: 157370070
Centisome position: 36.94
GC content: 57.54
Gene sequence:
>1173_bases ATGAAGTTGACGGACTATAACGGCCATTTTCTTACGCTGTGCCTGATGGCGACCGGCACCTTTGCCATCGGGACCGACGC GTTTATTGTCGCCGGTATCCTCGACGAGATATCCGGCACCTTTGCCGTCAGCCCCGCGCAAGCGGGGCAGTTAATCTCGG TATTTGCCCTGGCTTATATGCTGTTTGCCCCGCTGACCGCCTGGCTGCTGGGGAACCTCAATCGCAAACATATTTTGCAG TTGGCCCTGGTGTTATTTATCGCCGGTAATCTGGTTTGTGCCTATGCCGACAGTTTTTTGCAAATGTCTGCCGGACGGGT GCTGGCGGCGCTGGGCGCGGCTTGTTATACGCCACAGGCCGCAGCCTCTGCGGTTGGGCTGGTATCGGAGAAGCGCCGCG GGCTGGCGATATCTATCGTTTACGGCGGCATGACGCTGGCCATCGCCCTTGGCATTCCCTTCGGCACCTTCCTGGCAAAG TTGATCGGCTGGCGGGAAATCTTTTTGCTGATCGCCCTGTTGGGCGCGGTCTCACTGCTGGGGCTGTCGCTGGCGCTGAG CACCATTGCGGCACCGGGTAAACACACGCTGAAAGAGCGGCTTGCTCCGCTGCGGCAAAAAGCGGTACTGACCACCCTGC TGATTACCTTTTTCGCCGTCTGTTCCGAGCATATCGTTTACAGCTACGTGAGCGTATTGCTGAAAAACACCCAGTTTGGC CCGGAGGCCATTTTGCCGATTGCGCTGCTGGTGTTCGGTATCGGCGCCGTTATCGGTAACTTCGTTTCCGGCCTGTTAAC CGATACCTTCGGCAGCAAGTTTGTGCTGCTGTTTTCGGTATCGGTGCAAACCGTTTCGCTGTTCCTGCTGGCCTTTTACG TCAGCTCCCCTTGGTGGGTACTGGCGATTTTTCTGGTCTGGGGCATTACCGGCTGGATGTATCTGGTGCCGATCCAGCAC CACTTGTTGTCGCTGTCCAAACGCTTTGGCGCGCTGACCGTTTCACTCAACAGCTCGGTACTCTATGCCGGCATCGCGGC GGGTGGCATGCTGGGTGGCCTGACGCTGTATGCGCTGCCGGCATTTTATCTCCCCTTGTTCTCGCTGCCGCTGGGGGCTA TCGCCCTGCTGCTGACGCTGTTTTTCTTCCAGGGGGAAAAAACCAATGAGTGA
Upstream 100 bases:
>100_bases TGCGCGTTACGCCGACCTCTGCCCATACTCATGAGGACGTGGAATATTTCCTGGCGGCGTTAAGCAAAGTCTGGGCTGCC AATCAGTTACGGAGAGCAGG
Downstream 100 bases:
>100_bases TCTGCCCCTCCCGGTGCGGTATGAGCAAAATGGCGGCATTGCCGTGATTACCCTGAACCGGCCGGAAAAAAAGAACGCCA TCAATCTGGCGATGGCGCAA
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKLTDYNGHFLTLCLMATGTFAIGTDAFIVAGILDEISGTFAVSPAQAGQLISVFALAYMLFAPLTAWLLGNLNRKHILQ LALVLFIAGNLVCAYADSFLQMSAGRVLAALGAACYTPQAAASAVGLVSEKRRGLAISIVYGGMTLAIALGIPFGTFLAK LIGWREIFLLIALLGAVSLLGLSLALSTIAAPGKHTLKERLAPLRQKAVLTTLLITFFAVCSEHIVYSYVSVLLKNTQFG PEAILPIALLVFGIGAVIGNFVSGLLTDTFGSKFVLLFSVSVQTVSLFLLAFYVSSPWWVLAIFLVWGITGWMYLVPIQH HLLSLSKRFGALTVSLNSSVLYAGIAAGGMLGGLTLYALPAFYLPLFSLPLGAIALLLTLFFFQGEKTNE
Sequences:
>Translated_390_residues MKLTDYNGHFLTLCLMATGTFAIGTDAFIVAGILDEISGTFAVSPAQAGQLISVFALAYMLFAPLTAWLLGNLNRKHILQ LALVLFIAGNLVCAYADSFLQMSAGRVLAALGAACYTPQAAASAVGLVSEKRRGLAISIVYGGMTLAIALGIPFGTFLAK LIGWREIFLLIALLGAVSLLGLSLALSTIAAPGKHTLKERLAPLRQKAVLTTLLITFFAVCSEHIVYSYVSVLLKNTQFG PEAILPIALLVFGIGAVIGNFVSGLLTDTFGSKFVLLFSVSVQTVSLFLLAFYVSSPWWVLAIFLVWGITGWMYLVPIQH HLLSLSKRFGALTVSLNSSVLYAGIAAGGMLGGLTLYALPAFYLPLFSLPLGAIALLLTLFFFQGEKTNE >Mature_390_residues MKLTDYNGHFLTLCLMATGTFAIGTDAFIVAGILDEISGTFAVSPAQAGQLISVFALAYMLFAPLTAWLLGNLNRKHILQ LALVLFIAGNLVCAYADSFLQMSAGRVLAALGAACYTPQAAASAVGLVSEKRRGLAISIVYGGMTLAIALGIPFGTFLAK LIGWREIFLLIALLGAVSLLGLSLALSTIAAPGKHTLKERLAPLRQKAVLTTLLITFFAVCSEHIVYSYVSVLLKNTQFG PEAILPIALLVFGIGAVIGNFVSGLLTDTFGSKFVLLFSVSVQTVSLFLLAFYVSSPWWVLAIFLVWGITGWMYLVPIQH HLLSLSKRFGALTVSLNSSVLYAGIAAGGMLGGLTLYALPAFYLPLFSLPLGAIALLLTLFFFQGEKTNE
Specific function: Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and inosine, as well as purine bases guanine, adenine and hypoxanthine, and purine base analogs 2,6- diaminopurine, 6-mercaptopurine and 2-fluoroadenine. Therefore plays a role
COG id: COG2814
COG function: function code G; Arabinose efflux permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. PbuE (TC 2.A.1.2.25) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787947, Length=329, Percent_Identity=28.5714285714286, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1786595, Length=255, Percent_Identity=27.4509803921569, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI145693198, Length=329, Percent_Identity=23.4042553191489, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787808, Length=229, Percent_Identity=25.764192139738, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41499; Mature: 41499
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTDYNGHFLTLCLMATGTFAIGTDAFIVAGILDEISGTFAVSPAQAGQLISVFALAYM CCCCCCCCHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHH LFAPLTAWLLGNLNRKHILQLALVLFIAGNLVCAYADSFLQMSAGRVLAALGAACYTPQA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AASAVGLVSEKRRGLAISIVYGGMTLAIALGIPFGTFLAKLIGWREIFLLIALLGAVSLL HHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSLALSTIAAPGKHTLKERLAPLRQKAVLTTLLITFFAVCSEHIVYSYVSVLLKNTQFG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PEAILPIALLVFGIGAVIGNFVSGLLTDTFGSKFVLLFSVSVQTVSLFLLAFYVSSPWWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHH LAIFLVWGITGWMYLVPIQHHLLSLSKRFGALTVSLNSSVLYAGIAAGGMLGGLTLYALP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH AFYLPLFSLPLGAIALLLTLFFFQGEKTNE HHHHHHHHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLTDYNGHFLTLCLMATGTFAIGTDAFIVAGILDEISGTFAVSPAQAGQLISVFALAYM CCCCCCCCHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHH LFAPLTAWLLGNLNRKHILQLALVLFIAGNLVCAYADSFLQMSAGRVLAALGAACYTPQA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AASAVGLVSEKRRGLAISIVYGGMTLAIALGIPFGTFLAKLIGWREIFLLIALLGAVSLL HHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSLALSTIAAPGKHTLKERLAPLRQKAVLTTLLITFFAVCSEHIVYSYVSVLLKNTQFG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PEAILPIALLVFGIGAVIGNFVSGLLTDTFGSKFVLLFSVSVQTVSLFLLAFYVSSPWWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHH LAIFLVWGITGWMYLVPIQHHLLSLSKRFGALTVSLNSSVLYAGIAAGGMLGGLTLYALP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH AFYLPLFSLPLGAIALLLTLFFFQGEKTNE HHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]