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The map label for this gene is rfaQ [H]

Identifier: 157370018

GI number: 157370018

Start: 1950906

End: 1952075

Strand: Reverse

Name: rfaQ [H]

Synonym: Spro_1775

Alternate gene names: 157370018

Gene position: 1952075-1950906 (Counterclockwise)

Preceding gene: 157370019

Following gene: 157370017

Centisome position: 35.83

GC content: 58.03

Gene sequence:

>1170_bases
ATGACAAACGCTCCATACAACACGCGCAACACTCCATCCCAGGCGACATTACCTGACAGCCGTGTTCCCAACGCGCTATT
GCATCGGGAAATCGTGCAGCGAATTTTGGTCATTAAACTGCGCCATTTCGGTGACGTGCTGTTGATGACGCCCTTACTCA
GTACGCTGCGCGCTAATTACCCCAACGCGTTGATAGATGTGCTGGTGTATGATGGTACGGAGGCCATGCTGGCCGGCAAC
CAGGATGTGTACCTGGCCTATACCGTGGACCGCAACCTCAAACATCAGCGTCTCAAGGCACAATACCGCGGTGAGCAGGC
GTTGTGGAATAGCTTGCGTACGGGCCACTACGACCTGGTGATTAATCTCTCCGACCAGTGGCGGGCAGCGCTGTACTGCC
GTTTTCTCAAACCGACCTTCAGCCTGGGATTTCGGTACCACAAACGCAACAACCGGCTGTGGCAGGCCTGCCATTCGTTA
CTGGTTGACGTTGCCGACACCTCGAAACACACCGTGCTGAATAATCTCGACATTCTGGTGCCGCTGGCATTACCCACGAT
AATCACCACCGTGACGCAGACCTGGCGGCAGCGCGATGTCGATGAGATTGATCGGCTCAGCCGACGCCATCATCTGACGG
ATTTTGTGCTGATACAGCCCACCGCACGCTGGGCCTTCAAGACCTGGACGGTGGAAGGGTTCAGTGCCGTTATCAATCAT
CTTACCGCACAGGGCCGAACGGTGGTGATCACCGGCGGACGCTCGCCGGATGAAGCTGCAATGATCAGCGCCATTATGGC
CGGTTGCCTGTCACCACAGCGTGTGGTCAATCTGGCCGGGCGTCTGGACCTGCCGGAGCTTGCGGTGTTGATTGACCGGG
CCAGGCTGTTTATCGGCGTAGATTCGGTTCCCATGCACATGGCCGCCGCGTTGAAAACGCCCTCGGTAGTGCTGTTTGGG
CCGAGCAACCGGGCGCAATGGGCACCCTGGCAGGCGCCGCATACCTTGTTGTGGGCAGGCGATTATTGCTCATTGCCACC
ACCGGACACCGTCGATACCGACACACCTGAACGCTACCTCGCGGCCATTCCGGTCAGCGATGTTATACGGGCGGTGAGCC
GGCAACTGATCTTGTCAGCCGCGCCCGTCGTTACGTCGGCATTCCGTTAA

Upstream 100 bases:

>100_bases
CGCATCATCGGACGTGATGCACCGTTATTTTTCTCCTCACTGACGATTTCGACACCGGCTCGGAAGGGGATCCTTTGCAT
TTTTTCTGAGACGACAAGTT

Downstream 100 bases:

>100_bases
CTTCATCACGGCGGCCCGCCGTGCTTCGTTCCCCTTCAATGAGTACGTTACAATGATATCAGTCCCTGTGGTTTCCTCTT
CTTCACTGACGCAACCTCAG

Product: lipopolysaccharide heptosyltransferase III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MTNAPYNTRNTPSQATLPDSRVPNALLHREIVQRILVIKLRHFGDVLLMTPLLSTLRANYPNALIDVLVYDGTEAMLAGN
QDVYLAYTVDRNLKHQRLKAQYRGEQALWNSLRTGHYDLVINLSDQWRAALYCRFLKPTFSLGFRYHKRNNRLWQACHSL
LVDVADTSKHTVLNNLDILVPLALPTIITTVTQTWRQRDVDEIDRLSRRHHLTDFVLIQPTARWAFKTWTVEGFSAVINH
LTAQGRTVVITGGRSPDEAAMISAIMAGCLSPQRVVNLAGRLDLPELAVLIDRARLFIGVDSVPMHMAAALKTPSVVLFG
PSNRAQWAPWQAPHTLLWAGDYCSLPPPDTVDTDTPERYLAAIPVSDVIRAVSRQLILSAAPVVTSAFR

Sequences:

>Translated_389_residues
MTNAPYNTRNTPSQATLPDSRVPNALLHREIVQRILVIKLRHFGDVLLMTPLLSTLRANYPNALIDVLVYDGTEAMLAGN
QDVYLAYTVDRNLKHQRLKAQYRGEQALWNSLRTGHYDLVINLSDQWRAALYCRFLKPTFSLGFRYHKRNNRLWQACHSL
LVDVADTSKHTVLNNLDILVPLALPTIITTVTQTWRQRDVDEIDRLSRRHHLTDFVLIQPTARWAFKTWTVEGFSAVINH
LTAQGRTVVITGGRSPDEAAMISAIMAGCLSPQRVVNLAGRLDLPELAVLIDRARLFIGVDSVPMHMAAALKTPSVVLFG
PSNRAQWAPWQAPHTLLWAGDYCSLPPPDTVDTDTPERYLAAIPVSDVIRAVSRQLILSAAPVVTSAFR
>Mature_388_residues
TNAPYNTRNTPSQATLPDSRVPNALLHREIVQRILVIKLRHFGDVLLMTPLLSTLRANYPNALIDVLVYDGTEAMLAGNQ
DVYLAYTVDRNLKHQRLKAQYRGEQALWNSLRTGHYDLVINLSDQWRAALYCRFLKPTFSLGFRYHKRNNRLWQACHSLL
VDVADTSKHTVLNNLDILVPLALPTIITTVTQTWRQRDVDEIDRLSRRHHLTDFVLIQPTARWAFKTWTVEGFSAVINHL
TAQGRTVVITGGRSPDEAAMISAIMAGCLSPQRVVNLAGRLDLPELAVLIDRARLFIGVDSVPMHMAAALKTPSVVLFGP
SNRAQWAPWQAPHTLLWAGDYCSLPPPDTVDTDTPERYLAAIPVSDVIRAVSRQLILSAAPVVTSAFR

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=347, Percent_Identity=38.0403458213257, Blast_Score=221, Evalue=6e-59,
Organism=Escherichia coli, GI1790050, Length=307, Percent_Identity=28.3387622149837, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 43646; Mature: 43515

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAPYNTRNTPSQATLPDSRVPNALLHREIVQRILVIKLRHFGDVLLMTPLLSTLRANY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PNALIDVLVYDGTEAMLAGNQDVYLAYTVDRNLKHQRLKAQYRGEQALWNSLRTGHYDLV
CCCEEEEEEECCCCEEEECCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCEEEE
INLSDQWRAALYCRFLKPTFSLGFRYHKRNNRLWQACHSLLVDVADTSKHTVLNNLDILV
EECCHHHHHHHHHHHHCHHHHHCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEH
PLALPTIITTVTQTWRQRDVDEIDRLSRRHHLTDFVLIQPTARWAFKTWTVEGFSAVINH
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEHHHHHHHHHH
LTAQGRTVVITGGRSPDEAAMISAIMAGCLSPQRVVNLAGRLDLPELAVLIDRARLFIGV
HHCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHEEEC
DSVPMHMAAALKTPSVVLFGPSNRAQWAPWQAPHTLLWAGDYCSLPPPDTVDTDTPERYL
CCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHE
AAIPVSDVIRAVSRQLILSAAPVVTSAFR
EECCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNAPYNTRNTPSQATLPDSRVPNALLHREIVQRILVIKLRHFGDVLLMTPLLSTLRANY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PNALIDVLVYDGTEAMLAGNQDVYLAYTVDRNLKHQRLKAQYRGEQALWNSLRTGHYDLV
CCCEEEEEEECCCCEEEECCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCEEEE
INLSDQWRAALYCRFLKPTFSLGFRYHKRNNRLWQACHSLLVDVADTSKHTVLNNLDILV
EECCHHHHHHHHHHHHCHHHHHCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEH
PLALPTIITTVTQTWRQRDVDEIDRLSRRHHLTDFVLIQPTARWAFKTWTVEGFSAVINH
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEHHHHHHHHHH
LTAQGRTVVITGGRSPDEAAMISAIMAGCLSPQRVVNLAGRLDLPELAVLIDRARLFIGV
HHCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHEEEC
DSVPMHMAAALKTPSVVLFGPSNRAQWAPWQAPHTLLWAGDYCSLPPPDTVDTDTPERYL
CCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHE
AAIPVSDVIRAVSRQLILSAAPVVTSAFR
EECCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA