| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370017
Identifier: 157370017
GI number: 157370017
Start: 1949597
End: 1950853
Strand: Reverse
Name: 157370017
Synonym: Spro_1774
Alternate gene names: NA
Gene position: 1950853-1949597 (Counterclockwise)
Preceding gene: 157370018
Following gene: 157370016
Centisome position: 35.8
GC content: 57.04
Gene sequence:
>1257_bases ATGATATCAGTCCCTGTGGTTTCCTCTTCTTCACTGACGCAACCTCAGCAACGGTTGTTTACCTTCACGGCCTTTTTACT GGGGGCGTCACTCCCCACCTCCAATCCCCTGATGAATATCGCGCTGGGGTTGGCCCTGGTCTGTTTGCTCTGGCGGCGCG ATACCCGACAGATTGGGGCTCTTGCCAGTCACCCCCTGGTGTGGCTGCCGGCACTGATGTTTGCGCTGCTGGCGTTGTCG CTGCTGACGCATACCCATGACTATGGCCCCAAAATGGTCGGTAAATACCAAAAGCTGCTGTATGTCTTGCCGCTGGCGTT GTTTTTTCTGGCTGACCGTCGGTTGCTCACCCATTTTGTCAGCGGATTTGTGTGGGCGAATGCATTGATACTGGCCATCA GTCTGGCGGGCGGTCTCGGTCATGTCACGCTGGGCGGCCTTAATCCCGATAACCCCACGGTATTTAAACTGCAAATCACC CAGAACGTGTTTATGGCATTTGCCGCCCTGATATGGCTGTCGCGCACATTTGAATACAGAGGTTTGCTGCGATGGGGGTA TGCGGGGTTGGTGCTGTTGGCAACAGTGAATGTGTTGCTGATGGTACAGGGACGTACCGGGTATGTCGCGCTGGCGACCG GTATGGGCACCTGGTTACTGCTTACGCTCCGACGCAAGCAGCTGATTACGGTGCTCGCCTGCGGCACACTGGCCATTGCC ATGCTGGTGATGACCCCCAATCGCGCCATGGAACGCCTGACACTGGGGGTACAGCAAATTCAGGGCTGCGTCCTGGCCTC TGCCGAGTCGGCTTATCGGGCCTGCGACAACTCCATGGGACAACGTACCGCCTTCGCCCGCGAAGCTATTCACTTGATTA AACAGGCCCCGCTGCTGGGTAACGGCGCCGGTAGCTTCTGGTACGGCAATGCGGATACCGGTTACGGTGTACATAACCCG CACAACGAGTATTTGCTTCAAACGGCGCAAACCGGGTTGCTGGGATTGATGGTATTTCTCACCTGGATGTGGGGCTGCTA TCGCGCGGGCTGGCAGTTGCCGACACACTGCCGCACTCTGTTTGTCGCGGTGCTCAGCAGCTACATGGCCTGCCACCTGT TCAACTCCTTCCTACTGGACTCGTCCGAGGGTCACCTGTTTGTCATTATCGCAGCATGGCTGGCGGGTTTTACCATCGGA ACGCCACTGGCTGAGAACAGAAGTGGTTTACATCACCGGGCTGAAGGCCGTGAGTGA
Upstream 100 bases:
>100_bases CAACTGATCTTGTCAGCCGCGCCCGTCGTTACGTCGGCATTCCGTTAACTTCATCACGGCGGCCCGCCGTGCTTCGTTCC CCTTCAATGAGTACGTTACA
Downstream 100 bases:
>100_bases TCCGCTAAGCGAGTTATAAGTCCCCCTGGACAGGCTCATCTCCCAAAAATAACGCCCCTGAGTCAATACAGATTAACGCC CTGCTCACCTGAGTGGGGCG
Product: O-antigen polymerase
Products: NA
Alternate protein names: O-Antigen Biosynthesis Protein; O-Antigen Biosynthesis Protein Wzy_C Domain Protein; Lipid A Core -O-Antigen Ligase; Inner Membrane Protein
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MISVPVVSSSSLTQPQQRLFTFTAFLLGASLPTSNPLMNIALGLALVCLLWRRDTRQIGALASHPLVWLPALMFALLALS LLTHTHDYGPKMVGKYQKLLYVLPLALFFLADRRLLTHFVSGFVWANALILAISLAGGLGHVTLGGLNPDNPTVFKLQIT QNVFMAFAALIWLSRTFEYRGLLRWGYAGLVLLATVNVLLMVQGRTGYVALATGMGTWLLLTLRRKQLITVLACGTLAIA MLVMTPNRAMERLTLGVQQIQGCVLASAESAYRACDNSMGQRTAFAREAIHLIKQAPLLGNGAGSFWYGNADTGYGVHNP HNEYLLQTAQTGLLGLMVFLTWMWGCYRAGWQLPTHCRTLFVAVLSSYMACHLFNSFLLDSSEGHLFVIIAAWLAGFTIG TPLAENRSGLHHRAEGRE
Sequences:
>Translated_418_residues MISVPVVSSSSLTQPQQRLFTFTAFLLGASLPTSNPLMNIALGLALVCLLWRRDTRQIGALASHPLVWLPALMFALLALS LLTHTHDYGPKMVGKYQKLLYVLPLALFFLADRRLLTHFVSGFVWANALILAISLAGGLGHVTLGGLNPDNPTVFKLQIT QNVFMAFAALIWLSRTFEYRGLLRWGYAGLVLLATVNVLLMVQGRTGYVALATGMGTWLLLTLRRKQLITVLACGTLAIA MLVMTPNRAMERLTLGVQQIQGCVLASAESAYRACDNSMGQRTAFAREAIHLIKQAPLLGNGAGSFWYGNADTGYGVHNP HNEYLLQTAQTGLLGLMVFLTWMWGCYRAGWQLPTHCRTLFVAVLSSYMACHLFNSFLLDSSEGHLFVIIAAWLAGFTIG TPLAENRSGLHHRAEGRE >Mature_418_residues MISVPVVSSSSLTQPQQRLFTFTAFLLGASLPTSNPLMNIALGLALVCLLWRRDTRQIGALASHPLVWLPALMFALLALS LLTHTHDYGPKMVGKYQKLLYVLPLALFFLADRRLLTHFVSGFVWANALILAISLAGGLGHVTLGGLNPDNPTVFKLQIT QNVFMAFAALIWLSRTFEYRGLLRWGYAGLVLLATVNVLLMVQGRTGYVALATGMGTWLLLTLRRKQLITVLACGTLAIA MLVMTPNRAMERLTLGVQQIQGCVLASAESAYRACDNSMGQRTAFAREAIHLIKQAPLLGNGAGSFWYGNADTGYGVHNP HNEYLLQTAQTGLLGLMVFLTWMWGCYRAGWQLPTHCRTLFVAVLSSYMACHLFNSFLLDSSEGHLFVIIAAWLAGFTIG TPLAENRSGLHHRAEGRE
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45850; Mature: 45850
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVPVVSSSSLTQPQQRLFTFTAFLLGASLPTSNPLMNIALGLALVCLLWRRDTRQIGA CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH LASHPLVWLPALMFALLALSLLTHTHDYGPKMVGKYQKLLYVLPLALFFLADRRLLTHFV HHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFVWANALILAISLAGGLGHVTLGGLNPDNPTVFKLQITQNVFMAFAALIWLSRTFEYR HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH GLLRWGYAGLVLLATVNVLLMVQGRTGYVALATGMGTWLLLTLRRKQLITVLACGTLAIA HHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH MLVMTPNRAMERLTLGVQQIQGCVLASAESAYRACDNSMGQRTAFAREAIHLIKQAPLLG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NGAGSFWYGNADTGYGVHNPHNEYLLQTAQTGLLGLMVFLTWMWGCYRAGWQLPTHCRTL CCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH FVAVLSSYMACHLFNSFLLDSSEGHLFVIIAAWLAGFTIGTPLAENRSGLHHRAEGRE HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MISVPVVSSSSLTQPQQRLFTFTAFLLGASLPTSNPLMNIALGLALVCLLWRRDTRQIGA CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH LASHPLVWLPALMFALLALSLLTHTHDYGPKMVGKYQKLLYVLPLALFFLADRRLLTHFV HHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFVWANALILAISLAGGLGHVTLGGLNPDNPTVFKLQITQNVFMAFAALIWLSRTFEYR HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH GLLRWGYAGLVLLATVNVLLMVQGRTGYVALATGMGTWLLLTLRRKQLITVLACGTLAIA HHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH MLVMTPNRAMERLTLGVQQIQGCVLASAESAYRACDNSMGQRTAFAREAIHLIKQAPLLG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NGAGSFWYGNADTGYGVHNPHNEYLLQTAQTGLLGLMVFLTWMWGCYRAGWQLPTHCRTL CCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH FVAVLSSYMACHLFNSFLLDSSEGHLFVIIAAWLAGFTIGTPLAENRSGLHHRAEGRE HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA