| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yfjX [H]
Identifier: 157370016
GI number: 157370016
Start: 1948956
End: 1949414
Strand: Reverse
Name: yfjX [H]
Synonym: Spro_1773
Alternate gene names: 157370016
Gene position: 1949414-1948956 (Counterclockwise)
Preceding gene: 157370017
Following gene: 157370015
Centisome position: 35.78
GC content: 53.81
Gene sequence:
>459_bases GTGAATGATATTACTGCCATTAGCACGCCAACAATATCTCTGGTGACCGACACGCCGGTACTGAGCGCTACTCTCGTCCC CGACGCTGACCGCCCGTCATTCTGGTTACAGCATTTTGGCGATATCCCGCAATGGCTCCAAATCGAGTCACCGGTATTCG CCTGGCTCGACCTCTTGTGCGAACACTACTGCGGAGATTATTGGGAATTTTACGCCCTCAGTAACGGTGGGGCATTTATT ATTCCGTCCACCGAAGGCGAGTACGTACTCTTTAACGCACTGAACGGGAATGGTGCCACCGTCGGTCATGAGGCCGCCGG CATCATCGCCTGCCTGATAACCTACAGCCACCATGCCTGCAGTACAGAATGTGACGCGATGACGGAACACTACTACCGAC TGCGGGATTACGCCCTGACTCATCCTGAGTCTAACGCCATTATGCGCATCATCGACTAA
Upstream 100 bases:
>100_bases GCTCACCTGAGTGGGGCGTTGCCTTTTATGCCGCTGAGACCCTTTGCACCCGCCCTGACAAGCGGGTGCTTTTATTGAAC ATAACCTAAGGATACTCCCT
Downstream 100 bases:
>100_bases CCCTTCATACTCCCTGTGGACCCCCCATCATCATGATGAATACAACCCTATCCCCATCAGTGACGGAACTGCCGTTACCC ACGCAACGTACCATTCAGCG
Product: antirestriction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MNDITAISTPTISLVTDTPVLSATLVPDADRPSFWLQHFGDIPQWLQIESPVFAWLDLLCEHYCGDYWEFYALSNGGAFI IPSTEGEYVLFNALNGNGATVGHEAAGIIACLITYSHHACSTECDAMTEHYYRLRDYALTHPESNAIMRIID
Sequences:
>Translated_152_residues MNDITAISTPTISLVTDTPVLSATLVPDADRPSFWLQHFGDIPQWLQIESPVFAWLDLLCEHYCGDYWEFYALSNGGAFI IPSTEGEYVLFNALNGNGATVGHEAAGIIACLITYSHHACSTECDAMTEHYYRLRDYALTHPESNAIMRIID >Mature_152_residues MNDITAISTPTISLVTDTPVLSATLVPDADRPSFWLQHFGDIPQWLQIESPVFAWLDLLCEHYCGDYWEFYALSNGGAFI IPSTEGEYVLFNALNGNGATVGHEAAGIIACLITYSHHACSTECDAMTEHYYRLRDYALTHPESNAIMRIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antirestriction protein family [H]
Homologues:
Organism=Escherichia coli, GI1788996, Length=134, Percent_Identity=64.9253731343284, Blast_Score=187, Evalue=2e-49, Organism=Escherichia coli, GI1786442, Length=134, Percent_Identity=61.1940298507463, Blast_Score=174, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004914 - ProDom: PD012854 [H]
Pfam domain/function: PF03230 Antirestrict [H]
EC number: NA
Molecular weight: Translated: 16918; Mature: 16918
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDITAISTPTISLVTDTPVLSATLVPDADRPSFWLQHFGDIPQWLQIESPVFAWLDLLC CCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCEEECCHHHHHHHHHH EHYCGDYWEFYALSNGGAFIIPSTEGEYVLFNALNGNGATVGHEAAGIIACLITYSHHAC HHHCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC STECDAMTEHYYRLRDYALTHPESNAIMRIID CCHHHHHHHHHHHHHHHEECCCCCCCEEEEEC >Mature Secondary Structure MNDITAISTPTISLVTDTPVLSATLVPDADRPSFWLQHFGDIPQWLQIESPVFAWLDLLC CCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCEEECCHHHHHHHHHH EHYCGDYWEFYALSNGGAFIIPSTEGEYVLFNALNGNGATVGHEAAGIIACLITYSHHAC HHHCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC STECDAMTEHYYRLRDYALTHPESNAIMRIID CCHHHHHHHHHHHHHHHEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]