| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ycbZ [H]
Identifier: 157369995
GI number: 157369995
Start: 1930677
End: 1932449
Strand: Reverse
Name: ycbZ [H]
Synonym: Spro_1752
Alternate gene names: 157369995
Gene position: 1932449-1930677 (Counterclockwise)
Preceding gene: 157369997
Following gene: 157369994
Centisome position: 35.47
GC content: 55.56
Gene sequence:
>1773_bases TTGACGATTGCATCTAACACTTTGACCAATAACCGACTTGAATGGCAATCACTGTTGCCGGACGTTACGCCTTATCAAGC GATATTTGATACCGCCGCGCAGTTGGCCCCCGTGTCCTTTGCCTCTATTCAGCCTAGGCTGGAAAACGCACTGACGCTGT TTTGCCATCCACAGTCACCACCGCGTTTCATGTTGTTGAAAGCGCAAGAAACGCGTGAGTATCTGGCGCTGATCGCCCAG GCAGTTGAACAACTGCAGCCGCAGAACACCGCGTTCAAGGGCAGTCACTATGTGATCCAGGGCAGCAAGGTCAGCGTAGA ACCCGCCAGCCAGGGTGATGAACCCTTTGCCGCCGGGGGGGCCTGCGTGTATCAAGAGTGGGTTGAACCTGAACAGCTGT TTGGCTGCGTCCGGATCCACAATGGTGAAATCAACCTGCAGCCCGGCCTGGTGCATCAGGCCAACGGTGGTGTGCTGATC CTGTCTGCGCGTTCTCTGCTGGCTCAGCCGCTGCTGTGGCTGCGTTTGAAGCAGATGATCACCCAACGTCAGTTCCACTG GGTTTCCCCGGATGAGACACGCCCATTGCCAATTACCATTCCAGCCATGCCGCTGGAATTGCGGTTGATTGTGGTAGGCG ATCGTCACGGCCTTGCCGATTTCCATGATATTGAACCGGAGCTGAGTGAGCAGTCAGTTTACGGTGAATACGAGGAAGAT CTGCAACTCACCGAAATCGATGACATGGTGCAATGGTGTGGCTACGTCAATAGCCTTATCGAAGAGCAACAACTGCCGCC GCTGGCAGCCGATGCCTGGTACCCGCTGATGATACAGGCAGTACGTCACAGCGGCGATCAGGGCAACCTGCCGCTGTCCC CACTGTGGCTCGGCCAACAACTTTCCGAAGCCGCACTGTACGTCGAAGAAGAAAGCATCACTGCCAAAGCATTTGAAGCC GCGCTGAATGCGCGCGAGTGGCGTGAAAGCTATCTTGCCGAACGGATGCAGGATGAAATTGAGCTGGGCCAAATCCTGAT TGAAACCGAAGGCGAAGTCGTCGGTCAAATCAATGGCCTGTCGGTGCTGGAATACCCTGGCCATCCGCGCAGTTTCGGTG AACCCTCCCGTATCAGCTGTGTCGTACATCTTGGCGATGGTGAATTCACCGACGTTGAGCGCAAGGCCGAGCTTGGCGGC AATCTGCATGCCAAGGGCATGATGATTATGCAGGCGTTCCTGATTTCCGAACTGGAACTGGACCAACCGCTGCCCTTCTC TGCTTCGATCGTGTTTGAACAATCTTATGGCGAAGTGGACGGTGACAGCGCCTCATTGGCTGAGCTGTGCGCGCTCATCA GCGCACTGTCGCTACAGCCAATTACCCAGCAGATTGCAGTAACCGGTTCTGTCGACCAATTCGGTAATGTGCAGCCGATT GGCGGCGTTAACGAAAAAATCGAAGGCTTTTTTGAAGTTTGCCAACGTCGGGGTTTGACCGGCAAACAGGGCATTATTCT GCCCGCCACCAATGTGCGCCATCTGTGTCTGCATCAGGACGTGGTCGATGCGGTGCGCGAGGGACAGTTCCATCTGTGGG CCGTCAATAGCGCTGCGGAAGCCTTGCCATTACTCACCGGTTACCCCTACTCTGATGAACAGCAACCGAACCTGTTAGCT GCCATTCAGGAACGGATAGCACAGGTGAATCCGCAGGAACGCCGGCGTTGGCCATGGCCGCTTCGTTGGCTCAACTGGTT CAACCACGGCTGA
Upstream 100 bases:
>100_bases TTTTTGCACAGTCATCGCTCGATGTCAAACTCCCTGACATCAACTGTAACTCTGCATCTATCAAGCTGCCGTTATTCTTG TATAATCGCCCTTTCCCTTT
Downstream 100 bases:
>100_bases TCGGACTTGTTCAGCGTACACGTGTAAGCTAATCTGCGCCCTTCAATAAAATAAGGTTTACTGAGAACATGGTAGAAAAA CGCGACTCCTATACGAAAGA
Product: putative Lon protease
Products: NA
Alternate protein names: ATP-dependent protease La homolog [H]
Number of amino acids: Translated: 590; Mature: 589
Protein sequence:
>590_residues MTIASNTLTNNRLEWQSLLPDVTPYQAIFDTAAQLAPVSFASIQPRLENALTLFCHPQSPPRFMLLKAQETREYLALIAQ AVEQLQPQNTAFKGSHYVIQGSKVSVEPASQGDEPFAAGGACVYQEWVEPEQLFGCVRIHNGEINLQPGLVHQANGGVLI LSARSLLAQPLLWLRLKQMITQRQFHWVSPDETRPLPITIPAMPLELRLIVVGDRHGLADFHDIEPELSEQSVYGEYEED LQLTEIDDMVQWCGYVNSLIEEQQLPPLAADAWYPLMIQAVRHSGDQGNLPLSPLWLGQQLSEAALYVEEESITAKAFEA ALNAREWRESYLAERMQDEIELGQILIETEGEVVGQINGLSVLEYPGHPRSFGEPSRISCVVHLGDGEFTDVERKAELGG NLHAKGMMIMQAFLISELELDQPLPFSASIVFEQSYGEVDGDSASLAELCALISALSLQPITQQIAVTGSVDQFGNVQPI GGVNEKIEGFFEVCQRRGLTGKQGIILPATNVRHLCLHQDVVDAVREGQFHLWAVNSAAEALPLLTGYPYSDEQQPNLLA AIQERIAQVNPQERRRWPWPLRWLNWFNHG
Sequences:
>Translated_590_residues MTIASNTLTNNRLEWQSLLPDVTPYQAIFDTAAQLAPVSFASIQPRLENALTLFCHPQSPPRFMLLKAQETREYLALIAQ AVEQLQPQNTAFKGSHYVIQGSKVSVEPASQGDEPFAAGGACVYQEWVEPEQLFGCVRIHNGEINLQPGLVHQANGGVLI LSARSLLAQPLLWLRLKQMITQRQFHWVSPDETRPLPITIPAMPLELRLIVVGDRHGLADFHDIEPELSEQSVYGEYEED LQLTEIDDMVQWCGYVNSLIEEQQLPPLAADAWYPLMIQAVRHSGDQGNLPLSPLWLGQQLSEAALYVEEESITAKAFEA ALNAREWRESYLAERMQDEIELGQILIETEGEVVGQINGLSVLEYPGHPRSFGEPSRISCVVHLGDGEFTDVERKAELGG NLHAKGMMIMQAFLISELELDQPLPFSASIVFEQSYGEVDGDSASLAELCALISALSLQPITQQIAVTGSVDQFGNVQPI GGVNEKIEGFFEVCQRRGLTGKQGIILPATNVRHLCLHQDVVDAVREGQFHLWAVNSAAEALPLLTGYPYSDEQQPNLLA AIQERIAQVNPQERRRWPWPLRWLNWFNHG >Mature_589_residues TIASNTLTNNRLEWQSLLPDVTPYQAIFDTAAQLAPVSFASIQPRLENALTLFCHPQSPPRFMLLKAQETREYLALIAQA VEQLQPQNTAFKGSHYVIQGSKVSVEPASQGDEPFAAGGACVYQEWVEPEQLFGCVRIHNGEINLQPGLVHQANGGVLIL SARSLLAQPLLWLRLKQMITQRQFHWVSPDETRPLPITIPAMPLELRLIVVGDRHGLADFHDIEPELSEQSVYGEYEEDL QLTEIDDMVQWCGYVNSLIEEQQLPPLAADAWYPLMIQAVRHSGDQGNLPLSPLWLGQQLSEAALYVEEESITAKAFEAA LNAREWRESYLAERMQDEIELGQILIETEGEVVGQINGLSVLEYPGHPRSFGEPSRISCVVHLGDGEFTDVERKAELGGN LHAKGMMIMQAFLISELELDQPLPFSASIVFEQSYGEVDGDSASLAELCALISALSLQPITQQIAVTGSVDQFGNVQPIG GVNEKIEGFFEVCQRRGLTGKQGIILPATNVRHLCLHQDVVDAVREGQFHLWAVNSAAEALPLLTGYPYSDEQQPNLLAA IQERIAQVNPQERRRWPWPLRWLNWFNHG
Specific function: Unknown
COG id: COG1067
COG function: function code O; Predicted ATP-dependent protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S16 family [H]
Homologues:
Organism=Escherichia coli, GI1787188, Length=583, Percent_Identity=56.6037735849057, Blast_Score=686, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008269 - InterPro: IPR001984 - InterPro: IPR020568 [H]
Pfam domain/function: PF05362 Lon_C [H]
EC number: 3.4.21.-
Molecular weight: Translated: 65768; Mature: 65637
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIASNTLTNNRLEWQSLLPDVTPYQAIFDTAAQLAPVSFASIQPRLENALTLFCHPQSP CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCCC PRFMLLKAQETREYLALIAQAVEQLQPQNTAFKGSHYVIQGSKVSVEPASQGDEPFAAGG CCEEEEECHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCEEEECCCCCCCCCCCCCC ACVYQEWVEPEQLFGCVRIHNGEINLQPGLVHQANGGVLILSARSLLAQPLLWLRLKQMI HHHHHHHCCHHHHEEEEEEECCEEEECCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHH TQRQFHWVSPDETRPLPITIPAMPLELRLIVVGDRHGLADFHDIEPELSEQSVYGEYEED HHHHEECCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCHHCCCCCCCCHHHCCCHHHC LQLTEIDDMVQWCGYVNSLIEEQQLPPLAADAWYPLMIQAVRHSGDQGNLPLSPLWLGQQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH LSEAALYVEEESITAKAFEAALNAREWRESYLAERMQDEIELGQILIETEGEVVGQINGL HHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEECCE SVLEYPGHPRSFGEPSRISCVVHLGDGEFTDVERKAELGGNLHAKGMMIMQAFLISELEL EEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCC DQPLPFSASIVFEQSYGEVDGDSASLAELCALISALSLQPITQQIAVTGSVDQFGNVQPI CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHEEEECCHHHCCCCCCC GGVNEKIEGFFEVCQRRGLTGKQGIILPATNVRHLCLHQDVVDAVREGQFHLWAVNSAAE CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCHHH ALPLLTGYPYSDEQQPNLLAAIQERIAQVNPQERRRWPWPLRWLNWFNHG HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCC >Mature Secondary Structure TIASNTLTNNRLEWQSLLPDVTPYQAIFDTAAQLAPVSFASIQPRLENALTLFCHPQSP CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCCC PRFMLLKAQETREYLALIAQAVEQLQPQNTAFKGSHYVIQGSKVSVEPASQGDEPFAAGG CCEEEEECHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCEEEECCCCCCCCCCCCCC ACVYQEWVEPEQLFGCVRIHNGEINLQPGLVHQANGGVLILSARSLLAQPLLWLRLKQMI HHHHHHHCCHHHHEEEEEEECCEEEECCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHH TQRQFHWVSPDETRPLPITIPAMPLELRLIVVGDRHGLADFHDIEPELSEQSVYGEYEED HHHHEECCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCHHCCCCCCCCHHHCCCHHHC LQLTEIDDMVQWCGYVNSLIEEQQLPPLAADAWYPLMIQAVRHSGDQGNLPLSPLWLGQQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH LSEAALYVEEESITAKAFEAALNAREWRESYLAERMQDEIELGQILIETEGEVVGQINGL HHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEECCE SVLEYPGHPRSFGEPSRISCVVHLGDGEFTDVERKAELGGNLHAKGMMIMQAFLISELEL EEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCC DQPLPFSASIVFEQSYGEVDGDSASLAELCALISALSLQPITQQIAVTGSVDQFGNVQPI CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHEEEECCHHHCCCCCCC GGVNEKIEGFFEVCQRRGLTGKQGIILPATNVRHLCLHQDVVDAVREGQFHLWAVNSAAE CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCHHH ALPLLTGYPYSDEQQPNLLAAIQERIAQVNPQERRRWPWPLRWLNWFNHG HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]