| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is psuG
Identifier: 157369942
GI number: 157369942
Start: 1862604
End: 1863530
Strand: Direct
Name: psuG
Synonym: Spro_1699
Alternate gene names: 157369942
Gene position: 1862604-1863530 (Clockwise)
Preceding gene: 157369941
Following gene: 157369943
Centisome position: 34.18
GC content: 56.85
Gene sequence:
>927_bases ATGATGCAAGCTAATTTACTGCCTTTGGTTATTCATCCTGAAGTGAAGGCCGCCCTGGAAAGTCGCCACGCGGTGGTTGC GCTGGAGTCAAACGTCATTACCCATGGGCTGAACTATCCTGCCAATGTGGAGACTGCGCTGGCGGTGGAGGCGGCAGTCC GCCGCAGCGGCGCGGTTCCTGCGACCATTGGTATCTGCGATGGCGAAATTTTGGTGGGCATGCATCGCGAACAGATCGAA CGTTTCGCCACCACGCCTGGCATTGCGAAAGTATCCAGCAACAATTTGCCTTTTGTGCTGGCGCAAAAAAGCATGGGGGC CACTACGGTGGCTTCGTCGCTGATGTTGGCCGAACTGGCCGGTATTGGTTTCTTTGCTTCTGCGGGCATTGGTGGTGTGC ATCGCGGGGGAGAAGACAGCATGGATATCTCTTCCGATTTGATTCAATTTACCCGCACTAACGTGACGGTGGTGTGCGCA GGAGCCAAAAATATCCTCGATATCGGGCGTACGCTGGAGTTTCTGGAAACCCAGTGCGTTCCCGTGGTGACCTATCAGAC GGACGATTTCCCGGCCTTCTATTGTCGCAGTAGCGGCTATCGCAGTCCGCAACGGCTGGACAGCCTGGAGGCGATTGCTC AGGCGATTGATATTAACCGCGCATTGCCGGGCAGTGCGGCGATGGTGGTGGCAGCACCGACCAAACCGGAGGATGCGATT GACAGCCGTGACGTTCAGGCAGCGATCCAGGCCGCCATCGAGAATGCGGCCGCCAAAGGCGTAACTGGCAGCCAGGTAAC CAAATTCATTATGAAAGCGGTTGAGCAGGCGACCCATGGGCGTTCGGCCATGGCCAATGCGGCAGTATTGGTGAACACCG CCGAAATTGCGGGTCAGTTGGCTATGGTTTATCACCGGCCGCGCTAA
Upstream 100 bases:
>100_bases CGCTGGCGGTGGACCATTACCAATTGCTGCTGCCTGAAGGTGTCGCGCAACTGCAAGCGGCCCTGTTTCCCTCTGTTTCC GTTAATGTGATAAGTGAGTC
Downstream 100 bases:
>100_bases GAAAAGCCAGCGTTGCCCTCAGGGAAGGGGGCACGCCGGAACCCGATTGGCGCATGTCTTAGCGGTCATTGGGGGGCATT TTCATGATGATGTTACCCCG
Product: indigoidine synthase A family protein
Products: NA
Alternate protein names: PsiMP glycosidase
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MMQANLLPLVIHPEVKAALESRHAVVALESNVITHGLNYPANVETALAVEAAVRRSGAVPATIGICDGEILVGMHREQIE RFATTPGIAKVSSNNLPFVLAQKSMGATTVASSLMLAELAGIGFFASAGIGGVHRGGEDSMDISSDLIQFTRTNVTVVCA GAKNILDIGRTLEFLETQCVPVVTYQTDDFPAFYCRSSGYRSPQRLDSLEAIAQAIDINRALPGSAAMVVAAPTKPEDAI DSRDVQAAIQAAIENAAAKGVTGSQVTKFIMKAVEQATHGRSAMANAAVLVNTAEIAGQLAMVYHRPR
Sequences:
>Translated_308_residues MMQANLLPLVIHPEVKAALESRHAVVALESNVITHGLNYPANVETALAVEAAVRRSGAVPATIGICDGEILVGMHREQIE RFATTPGIAKVSSNNLPFVLAQKSMGATTVASSLMLAELAGIGFFASAGIGGVHRGGEDSMDISSDLIQFTRTNVTVVCA GAKNILDIGRTLEFLETQCVPVVTYQTDDFPAFYCRSSGYRSPQRLDSLEAIAQAIDINRALPGSAAMVVAAPTKPEDAI DSRDVQAAIQAAIENAAAKGVTGSQVTKFIMKAVEQATHGRSAMANAAVLVNTAEIAGQLAMVYHRPR >Mature_308_residues MMQANLLPLVIHPEVKAALESRHAVVALESNVITHGLNYPANVETALAVEAAVRRSGAVPATIGICDGEILVGMHREQIE RFATTPGIAKVSSNNLPFVLAQKSMGATTVASSLMLAELAGIGFFASAGIGGVHRGGEDSMDISSDLIQFTRTNVTVVCA GAKNILDIGRTLEFLETQCVPVVTYQTDDFPAFYCRSSGYRSPQRLDSLEAIAQAIDINRALPGSAAMVVAAPTKPEDAI DSRDVQAAIQAAIENAAAKGVTGSQVTKFIMKAVEQATHGRSAMANAAVLVNTAEIAGQLAMVYHRPR
Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil
COG id: COG2313
COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family
Homologues:
Organism=Escherichia coli, GI1788490, Length=299, Percent_Identity=46.1538461538462, Blast_Score=258, Evalue=3e-70, Organism=Caenorhabditis elegans, GI25147470, Length=302, Percent_Identity=42.7152317880795, Blast_Score=234, Evalue=4e-62, Organism=Drosophila melanogaster, GI24580669, Length=297, Percent_Identity=46.1279461279461, Blast_Score=263, Evalue=8e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSUG_SERP5 (A8GCG3)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001477931.1 - ProteinModelPortal: A8GCG3 - SMR: A8GCG3 - STRING: A8GCG3 - GeneID: 5604287 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_1699 - eggNOG: COG2313 - HOGENOM: HBG308892 - OMA: AFYCRSS - ProtClustDB: CLSK862888 - BioCyc: SPRO399741:SPRO_1699-MONOMER - HAMAP: MF_01876 - InterPro: IPR022830 - InterPro: IPR007342 - PANTHER: PTHR10584:SF1
Pfam domain/function: PF04227 Indigoidine_A; SSF110581 Indigdn_synthA
EC number: NA
Molecular weight: Translated: 32382; Mature: 32382
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQANLLPLVIHPEVKAALESRHAVVALESNVITHGLNYPANVETALAVEAAVRRSGAVP CCCCCCEEEEECCHHHHHHHCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHCCCCC ATIGICDGEILVGMHREQIERFATTPGIAKVSSNNLPFVLAQKSMGATTVASSLMLAELA EEEEEECCCEEECCCHHHHHHHHCCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHH GIGFFASAGIGGVHRGGEDSMDISSDLIQFTRTNVTVVCAGAKNILDIGRTLEFLETQCV CCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCE PVVTYQTDDFPAFYCRSSGYRSPQRLDSLEAIAQAIDINRALPGSAAMVVAAPTKPEDAI EEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHC DSRDVQAAIQAAIENAAAKGVTGSQVTKFIMKAVEQATHGRSAMANAAVLVNTAEIAGQL CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEHHHHHHE AMVYHRPR EEEEECCC >Mature Secondary Structure MMQANLLPLVIHPEVKAALESRHAVVALESNVITHGLNYPANVETALAVEAAVRRSGAVP CCCCCCEEEEECCHHHHHHHCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHCCCCC ATIGICDGEILVGMHREQIERFATTPGIAKVSSNNLPFVLAQKSMGATTVASSLMLAELA EEEEEECCCEEECCCHHHHHHHHCCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHH GIGFFASAGIGGVHRGGEDSMDISSDLIQFTRTNVTVVCAGAKNILDIGRTLEFLETQCV CCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCE PVVTYQTDDFPAFYCRSSGYRSPQRLDSLEAIAQAIDINRALPGSAAMVVAAPTKPEDAI EEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHC DSRDVQAAIQAAIENAAAKGVTGSQVTKFIMKAVEQATHGRSAMANAAVLVNTAEIAGQL CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEHHHHHHE AMVYHRPR EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA