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The map label for this gene is ycaD [C]

Identifier: 157369943

GI number: 157369943

Start: 1863745

End: 1864890

Strand: Direct

Name: ycaD [C]

Synonym: Spro_1700

Alternate gene names: 157369943

Gene position: 1863745-1864890 (Clockwise)

Preceding gene: 157369942

Following gene: 157369948

Centisome position: 34.2

GC content: 56.98

Gene sequence:

>1146_bases
ATGTCCGCATATTCCCGGCCAGTGCTCCTGCTGCTCTGTGGCCTGTTGTTGCTCACGGTTTCTATTGCCGTATTGAATAC
GTTAGTTCCTCTTTGGTTAACCCATGCTCAGTTGTCAACCGGGCAGGTGGGAATGGTAAGTTCCTCTTACTTTACCGGCA
ATCTGTTTGGCACGCTGATGGCGGGCAAACTGATCCAGCGCATTGGGTTTACCCGCAGTTATCACCTTGCCTGCGTGGTG
TTCGCCGTGGCGACCGCCGGTATGGCGTTGTCGCTCGATTTCTGGAGTTGGATGGGCTGGCGTTTCTTTGCCGGTATCGG
CTGCGCCTGGATTTGGGTGATTGTTGAGAGCGCCTTATTGCGCAGCGGAAACCTGACCAACCGTGGCCAACTGCTGGCGG
CCTATATGATGGTTTACTACCTGGGAACGGTGGTCGGCCAACTGCTGCTGAGTATGGTGTCTACCGAGCTGTTGAACGTG
GTGCCCTGGGTGACGGCCATTGTGATCAGCGCCATGTTGCCGATGTTGTTTGCCCGGGTTAACAGCCAGCACGATGAACC
TCAACACGCCGCGGTTTGGCCGATGTTGAAGCGCCGCAGTGCGCGGTTGGGCATCAATGGCTGTATTATCTCCGGTATTG
TTCTCGGCTCGTTGTATGGCCTGATGCCGCTGTATTTATCCCATCAGGGGATGAGCGACGCCAACGTCGGTTACTGGATG
GCATTACTGGTCAGTTCAGGCATTGTCGGCCAGTGGCCGGTAGGGCGCCTGGCTGATCGCTATGGGCGCCTGCTGGTGTT
GCGTATTCAGGTATTCGTGGTGATCCTCGCCAGCGTGGCGATGCTCAGTCACTCTGCCATGGCACCGGCGCTATTTATTC
TCGGCTGTGCCGGGTTTACCCTGTACCCGGTCGCGATGTCCTGGGCCTGTGAGAAAGCGATGCCTCATGAGCTGGTGGCG
ATGAATCAGGCACTGTTGATGAGTTACACCATCGGCAGCCTGCTCGGCCCGTCGATGACGGCGCTGCTGATGCAAAATTA
TTCCGACCAATCGCTGTTTGTGATGATCGCCGCAGTCGCACTGGTCTATCTGATGATGCTGCTGAAAAAGCCGGACCCGC
AACACACCCCGCTGGCTGCCGCCTGA

Upstream 100 bases:

>100_bases
AAAACAAATCGTGCGATCCACTGATAAGAGCTGATTGACTTTTTTATCGCCAGTGGCATGATGCGCGCACTCTCATTGCG
CGTTCGGTTTCAATCTCACT

Downstream 100 bases:

>100_bases
GCATAAAAAACCCGGCCATAGCGCGCCGGGTTTTTTTGTAGCCAACGGACTTAGTACATTACTTTGTGGCCGTAGCTTTC
CAGAATGCCTTTGACGCGTT

Product: putative MFS family transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSAYSRPVLLLLCGLLLLTVSIAVLNTLVPLWLTHAQLSTGQVGMVSSSYFTGNLFGTLMAGKLIQRIGFTRSYHLACVV
FAVATAGMALSLDFWSWMGWRFFAGIGCAWIWVIVESALLRSGNLTNRGQLLAAYMMVYYLGTVVGQLLLSMVSTELLNV
VPWVTAIVISAMLPMLFARVNSQHDEPQHAAVWPMLKRRSARLGINGCIISGIVLGSLYGLMPLYLSHQGMSDANVGYWM
ALLVSSGIVGQWPVGRLADRYGRLLVLRIQVFVVILASVAMLSHSAMAPALFILGCAGFTLYPVAMSWACEKAMPHELVA
MNQALLMSYTIGSLLGPSMTALLMQNYSDQSLFVMIAAVALVYLMMLLKKPDPQHTPLAAA

Sequences:

>Translated_381_residues
MSAYSRPVLLLLCGLLLLTVSIAVLNTLVPLWLTHAQLSTGQVGMVSSSYFTGNLFGTLMAGKLIQRIGFTRSYHLACVV
FAVATAGMALSLDFWSWMGWRFFAGIGCAWIWVIVESALLRSGNLTNRGQLLAAYMMVYYLGTVVGQLLLSMVSTELLNV
VPWVTAIVISAMLPMLFARVNSQHDEPQHAAVWPMLKRRSARLGINGCIISGIVLGSLYGLMPLYLSHQGMSDANVGYWM
ALLVSSGIVGQWPVGRLADRYGRLLVLRIQVFVVILASVAMLSHSAMAPALFILGCAGFTLYPVAMSWACEKAMPHELVA
MNQALLMSYTIGSLLGPSMTALLMQNYSDQSLFVMIAAVALVYLMMLLKKPDPQHTPLAAA
>Mature_380_residues
SAYSRPVLLLLCGLLLLTVSIAVLNTLVPLWLTHAQLSTGQVGMVSSSYFTGNLFGTLMAGKLIQRIGFTRSYHLACVVF
AVATAGMALSLDFWSWMGWRFFAGIGCAWIWVIVESALLRSGNLTNRGQLLAAYMMVYYLGTVVGQLLLSMVSTELLNVV
PWVTAIVISAMLPMLFARVNSQHDEPQHAAVWPMLKRRSARLGINGCIISGIVLGSLYGLMPLYLSHQGMSDANVGYWMA
LLVSSGIVGQWPVGRLADRYGRLLVLRIQVFVVILASVAMLSHSAMAPALFILGCAGFTLYPVAMSWACEKAMPHELVAM
NQALLMSYTIGSLLGPSMTALLMQNYSDQSLFVMIAAVALVYLMMLLKKPDPQHTPLAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. YcaD (TC 2.A.1.26) family [H]

Homologues:

Organism=Escherichia coli, GI1787126, Length=378, Percent_Identity=67.989417989418, Blast_Score=509, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41433; Mature: 41302

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYSRPVLLLLCGLLLLTVSIAVLNTLVPLWLTHAQLSTGQVGMVSSSYFTGNLFGTLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
AGKLIQRIGFTRSYHLACVVFAVATAGMALSLDFWSWMGWRFFAGIGCAWIWVIVESALL
HHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSGNLTNRGQLLAAYMMVYYLGTVVGQLLLSMVSTELLNVVPWVTAIVISAMLPMLFARV
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSQHDEPQHAAVWPMLKRRSARLGINGCIISGIVLGSLYGLMPLYLSHQGMSDANVGYWM
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ALLVSSGIVGQWPVGRLADRYGRLLVLRIQVFVVILASVAMLSHSAMAPALFILGCAGFT
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LYPVAMSWACEKAMPHELVAMNQALLMSYTIGSLLGPSMTALLMQNYSDQSLFVMIAAVA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHH
LVYLMMLLKKPDPQHTPLAAA
HHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SAYSRPVLLLLCGLLLLTVSIAVLNTLVPLWLTHAQLSTGQVGMVSSSYFTGNLFGTLM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH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HHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]