| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is macA [H]
Identifier: 157369913
GI number: 157369913
Start: 1826647
End: 1827693
Strand: Direct
Name: macA [H]
Synonym: Spro_1670
Alternate gene names: 157369913
Gene position: 1826647-1827693 (Clockwise)
Preceding gene: 157369911
Following gene: 157369914
Centisome position: 33.52
GC content: 57.5
Gene sequence:
>1047_bases ATGGCGGCCTGGCACTTCAGCCACCCGGCCCCGACTCCATTTAAAACGGTGAAGGTGGTCAAGGGCGATCTACAGCAAAA CGTACTGGCAACCGGCCAGCTTGACGCGGTACGCAAGGTTGACGTGGGTGCGCAGGTGAGTGGGCAGTTGGAAAGCCTGT ATGTCGAGATCGGCGATCGGGTTAAAAAAGGCCAGTTGCTTGGGGTAATTGATCCGCAACAGGCGCAAAACAGCATCCGT GAGGGTGAGGCGACGTTGCGTGAGCTGCACGCCCAATTGCAACAGGCGCAGGCTGAGCAACAGCTGGCGGCGGTAACGCT GCAGCGTAATCAGGCGTTGGCCAAACTGCAGGCGGTGTCACGCCAGGATCTGGATCAGGCGGCGACACAGTTGGCGGTGA AGAAGGCGCAGGTGGGTACCATTCAGGCGCAGATCGCCAGGAATCAGGCCAGCCTGGATACCGCCAAGATCAATCTGGCG TTTACCCGTATAGAAGCACCGATGGACGGTGACGTGGTGCAAATCACCACGCTGCAGGGCCAGACGGTGATAGCCGCGCA GCAGGCACCGAACATTTTGACGCTGGCGGATCTCAGCACCATGCTGGTGAAGGCTCAGGTGTCGGAAGCGGACGTCATCA GCCTCAAGCCGGGCCAAAAAGCCTGGTTTACCGTGTTGGGCGATCCTAACCGACGCTTTGACGGCGTGCTGAAAGATATT CAGCCAACGCCGGAAAAGGTCAATAACGCCATCTTTTACTATGCGCGTTTTGAAGTGCCCAATCCCGAGGGATTATTGCG ACTGCAGATGACGGCGCAGGTGCATATTCAACTGGCGGGCGTCAACCAGGTGCAGGTCATTCCTCTGGCCGCGTTGGGCG ATCAAATCGCCGATAATCGCTACCATGTTTCGATATTGAAACAGGGCAAGGAGGAAAAGCGCGAGGTGGCCATTGGCCTG CGAAATAATATCGACGTGCAAATTCTCAGCGGGTTGAACATTGGCGATGAAGTGATTGTCAGCCGCGGCGGCGCGGAGGC TCTCTGA
Upstream 100 bases:
>100_bases CAGCATGAATTGCAACAGGCAGGAACCTATTTTGACGTGGTTTAAAGGACATAAGCGACGCTGGGTCATGGCGCTAATCG TACTGGTGGCGATCGTGGCG
Downstream 100 bases:
>100_bases TGGCCGCGCTGTTGGAACTGAGCGGCATCAGCCGCAGCTATCAGTCGGGCGACCAGACCGTAGCGGTGTTGAAGGACGTG AGCCTGAGCATCAATGCCGG
Product: macrolide transporter subunit MacA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAAWHFSHPAPTPFKTVKVVKGDLQQNVLATGQLDAVRKVDVGAQVSGQLESLYVEIGDRVKKGQLLGVIDPQQAQNSIR EGEATLRELHAQLQQAQAEQQLAAVTLQRNQALAKLQAVSRQDLDQAATQLAVKKAQVGTIQAQIARNQASLDTAKINLA FTRIEAPMDGDVVQITTLQGQTVIAAQQAPNILTLADLSTMLVKAQVSEADVISLKPGQKAWFTVLGDPNRRFDGVLKDI QPTPEKVNNAIFYYARFEVPNPEGLLRLQMTAQVHIQLAGVNQVQVIPLAALGDQIADNRYHVSILKQGKEEKREVAIGL RNNIDVQILSGLNIGDEVIVSRGGAEAL
Sequences:
>Translated_348_residues MAAWHFSHPAPTPFKTVKVVKGDLQQNVLATGQLDAVRKVDVGAQVSGQLESLYVEIGDRVKKGQLLGVIDPQQAQNSIR EGEATLRELHAQLQQAQAEQQLAAVTLQRNQALAKLQAVSRQDLDQAATQLAVKKAQVGTIQAQIARNQASLDTAKINLA FTRIEAPMDGDVVQITTLQGQTVIAAQQAPNILTLADLSTMLVKAQVSEADVISLKPGQKAWFTVLGDPNRRFDGVLKDI QPTPEKVNNAIFYYARFEVPNPEGLLRLQMTAQVHIQLAGVNQVQVIPLAALGDQIADNRYHVSILKQGKEEKREVAIGL RNNIDVQILSGLNIGDEVIVSRGGAEAL >Mature_347_residues AAWHFSHPAPTPFKTVKVVKGDLQQNVLATGQLDAVRKVDVGAQVSGQLESLYVEIGDRVKKGQLLGVIDPQQAQNSIRE GEATLRELHAQLQQAQAEQQLAAVTLQRNQALAKLQAVSRQDLDQAATQLAVKKAQVGTIQAQIARNQASLDTAKINLAF TRIEAPMDGDVVQITTLQGQTVIAAQQAPNILTLADLSTMLVKAQVSEADVISLKPGQKAWFTVLGDPNRRFDGVLKDIQ PTPEKVNNAIFYYARFEVPNPEGLLRLQMTAQVHIQLAGVNQVQVIPLAALGDQIADNRYHVSILKQGKEEKREVAIGLR NNIDVQILSGLNIGDEVIVSRGGAEAL
Specific function: Efflux transporter for macrolide antibiotics [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87081796, Length=338, Percent_Identity=70.414201183432, Blast_Score=470, Evalue=1e-134, Organism=Escherichia coli, GI87082036, Length=337, Percent_Identity=26.7062314540059, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1790519, Length=239, Percent_Identity=27.6150627615063, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789637, Length=201, Percent_Identity=28.8557213930348, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 37750; Mature: 37619
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAWHFSHPAPTPFKTVKVVKGDLQQNVLATGQLDAVRKVDVGAQVSGQLESLYVEIGDR CCCEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHEEECCCCCCCCCHHHHHHHHCCC VKKGQLLGVIDPQQAQNSIREGEATLRELHAQLQQAQAEQQLAAVTLQRNQALAKLQAVS CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQDLDQAATQLAVKKAQVGTIQAQIARNQASLDTAKINLAFTRIEAPMDGDVVQITTLQG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCEEEEEEECC QTVIAAQQAPNILTLADLSTMLVKAQVSEADVISLKPGQKAWFTVLGDPNRRFDGVLKDI CEEEEECCCCCEEEEHHHHHHHHHEECCCCCEEEECCCCCEEEEEECCCCCHHHHHHHCC QPTPEKVNNAIFYYARFEVPNPEGLLRLQMTAQVHIQLAGVNQVQVIPLAALGDQIADNR CCCCHHHCCEEEEEEEEECCCCCCEEEEEEEEEEEEEEECCCEEEEEEEHHHCHHHCCCC YHVSILKQGKEEKREVAIGLRNNIDVQILSGLNIGDEVIVSRGGAEAL EEEEEECCCCHHHHHEEEECCCCCCEEEEECCCCCCHHEEECCCCCCC >Mature Secondary Structure AAWHFSHPAPTPFKTVKVVKGDLQQNVLATGQLDAVRKVDVGAQVSGQLESLYVEIGDR CCEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHEEECCCCCCCCCHHHHHHHHCCC VKKGQLLGVIDPQQAQNSIREGEATLRELHAQLQQAQAEQQLAAVTLQRNQALAKLQAVS CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQDLDQAATQLAVKKAQVGTIQAQIARNQASLDTAKINLAFTRIEAPMDGDVVQITTLQG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCEEEEEEECC QTVIAAQQAPNILTLADLSTMLVKAQVSEADVISLKPGQKAWFTVLGDPNRRFDGVLKDI CEEEEECCCCCEEEEHHHHHHHHHEECCCCCEEEECCCCCEEEEEECCCCCHHHHHHHCC QPTPEKVNNAIFYYARFEVPNPEGLLRLQMTAQVHIQLAGVNQVQVIPLAALGDQIADNR CCCCHHHCCEEEEEEEEECCCCCCEEEEEEEEEEEEEEECCCEEEEEEEHHHCHHHCCCC YHVSILKQGKEEKREVAIGLRNNIDVQILSGLNIGDEVIVSRGGAEAL EEEEEECCCCHHHHHEEEECCCCCCEEEEECCCCCCHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]