| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hcr [H]
Identifier: 157369908
GI number: 157369908
Start: 1819788
End: 1820792
Strand: Reverse
Name: hcr [H]
Synonym: Spro_1665
Alternate gene names: 157369908
Gene position: 1820792-1819788 (Counterclockwise)
Preceding gene: 157369909
Following gene: 157369907
Centisome position: 33.42
GC content: 60.3
Gene sequence:
>1005_bases ATGACCCAACCCAGCCCACTTTGCCCCAACCGCATGCAGGTGCATTCGATCCAGCAGGAAACCGCCGACGTCTGGACGCT CAACCTGATCTGCGATGTTTTTTACCCTTATCAACCCGGTCAGTTTGCGCTGGTCAGTATCCGTAATAGCGAAGACACTC TACGCGCCTATACGCTCTCCTCTTCGCCCGGCCAGAGCCGTTTTCTCAGCATCAGTGTACGTTGCCTGCCGGACGGCGTG GGTTCGCGCTGGTTAACCGGCGAAGTCAAACCCGGCAACACCCTGTGGCTGTCCGATGCGCAAGGCGAGTTCAGCTGTGA ACAACATCCGGCCGATCGTTACCTGATGCTGGCGGCCGGCTGCGGCGTAACGCCGATCATCTCCATGTGTCGCTGGCTGG TGGCCAATCGCCCGACCTGTGATATCGCAGTGATCTTTAACGTACGCACTCCCGCCGATACCATTTTTGCCGAGCAATGG CGCGAGTTATGCGCCACGCACCCGCAACTGCGACTGACGCTGATGGCCGAACAGGACATTCAACCAGGTTATCTCAATGG GCGAATCAGTGCCGAAGTGCTGCGCCAGGCGGCGCCGGATATCACTGAGCGCACCGTGATGACCTGCGGCCCGGCCCCCT ATATGGCTCAGGCAGAACGGCTTTGCCTGCAGCTGGGCGTAGCGGCCGACCGTTTCCATAAAGAGCAGTTCCATACCCCG GCAGCCACCGATGGCGAACAGGGCGAAGGATTAACCTTGCGCACCGCCCGCCCGCTGCGTGAGTTCCGCGTACCGGTCGG CAGCACATTGCTGGCGGCAATGGAAGCTCACGTGCTGCCGGTCAACGCCGCCTGCCGCGCTGGTGTGTGTGGTTCATGTA AAACCCGCATCCTCGAAGGTGACTACACCACCACCAGCAGCATGACTCTGACTGCGGCTGAAATCGCCCAGGGCTATGTA CTGGCTTGCAGTTGCCAACTGCAAGGTGACGTCACCCTCGCCTGA
Upstream 100 bases:
>100_bases CCCGATCACCACCGTAGATCAGGATCTGCAAGCCCTGCTCGGCTAATGCTGCTGTTTCTCGGGGCCGCAGATGTCGGCCC CTTTGCTTTTGAGGTGCCCA
Downstream 100 bases:
>100_bases TGCTTTCTGCCCCGTTGGCCACGATGGGGCATTTATCGGCAAGCAGGCTTTACCTTCCCCTTCTACACTTTCCCGGTTCC ATGTTCGTTACTGCGTTTAT
Product: HCP oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTQPSPLCPNRMQVHSIQQETADVWTLNLICDVFYPYQPGQFALVSIRNSEDTLRAYTLSSSPGQSRFLSISVRCLPDGV GSRWLTGEVKPGNTLWLSDAQGEFSCEQHPADRYLMLAAGCGVTPIISMCRWLVANRPTCDIAVIFNVRTPADTIFAEQW RELCATHPQLRLTLMAEQDIQPGYLNGRISAEVLRQAAPDITERTVMTCGPAPYMAQAERLCLQLGVAADRFHKEQFHTP AATDGEQGEGLTLRTARPLREFRVPVGSTLLAAMEAHVLPVNAACRAGVCGSCKTRILEGDYTTTSSMTLTAAEIAQGYV LACSCQLQGDVTLA
Sequences:
>Translated_334_residues MTQPSPLCPNRMQVHSIQQETADVWTLNLICDVFYPYQPGQFALVSIRNSEDTLRAYTLSSSPGQSRFLSISVRCLPDGV GSRWLTGEVKPGNTLWLSDAQGEFSCEQHPADRYLMLAAGCGVTPIISMCRWLVANRPTCDIAVIFNVRTPADTIFAEQW RELCATHPQLRLTLMAEQDIQPGYLNGRISAEVLRQAAPDITERTVMTCGPAPYMAQAERLCLQLGVAADRFHKEQFHTP AATDGEQGEGLTLRTARPLREFRVPVGSTLLAAMEAHVLPVNAACRAGVCGSCKTRILEGDYTTTSSMTLTAAEIAQGYV LACSCQLQGDVTLA >Mature_333_residues TQPSPLCPNRMQVHSIQQETADVWTLNLICDVFYPYQPGQFALVSIRNSEDTLRAYTLSSSPGQSRFLSISVRCLPDGVG SRWLTGEVKPGNTLWLSDAQGEFSCEQHPADRYLMLAAGCGVTPIISMCRWLVANRPTCDIAVIFNVRTPADTIFAEQWR ELCATHPQLRLTLMAEQDIQPGYLNGRISAEVLRQAAPDITERTVMTCGPAPYMAQAERLCLQLGVAADRFHKEQFHTPA ATDGEQGEGLTLRTARPLREFRVPVGSTLLAAMEAHVLPVNAACRAGVCGSCKTRILEGDYTTTSSMTLTAAEIAQGYVL ACSCQLQGDVTLA
Specific function: NADH oxidoreductase acting in concert with HCP [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1787098, Length=334, Percent_Identity=56.8862275449102, Blast_Score=389, Evalue=1e-109, Organism=Escherichia coli, GI1787658, Length=339, Percent_Identity=28.023598820059, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1788104, Length=325, Percent_Identity=28.6153846153846, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR000951 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36514; Mature: 36383
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPSPLCPNRMQVHSIQQETADVWTLNLICDVFYPYQPGQFALVSIRNSEDTLRAYTLS CCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEC SSPGQSRFLSISVRCLPDGVGSRWLTGEVKPGNTLWLSDAQGEFSCEQHPADRYLMLAAG CCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEC CGVTPIISMCRWLVANRPTCDIAVIFNVRTPADTIFAEQWRELCATHPQLRLTLMAEQDI CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC QPGYLNGRISAEVLRQAAPDITERTVMTCGPAPYMAQAERLCLQLGVAADRFHKEQFHTP CCCCCCCCHHHHHHHHHCCCHHHCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC AATDGEQGEGLTLRTARPLREFRVPVGSTLLAAMEAHVLPVNAACRAGVCGSCKTRILEG CCCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHEEEEECCHHCCCCCCCCCCEEEEC DYTTTSSMTLTAAEIAQGYVLACSCQLQGDVTLA CCEECCCEEEEHHHHHCCEEEEEEEEECCCEEEC >Mature Secondary Structure TQPSPLCPNRMQVHSIQQETADVWTLNLICDVFYPYQPGQFALVSIRNSEDTLRAYTLS CCCCCCCCCCHHHHHHHHHHHHEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEC SSPGQSRFLSISVRCLPDGVGSRWLTGEVKPGNTLWLSDAQGEFSCEQHPADRYLMLAAG CCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEC CGVTPIISMCRWLVANRPTCDIAVIFNVRTPADTIFAEQWRELCATHPQLRLTLMAEQDI CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC QPGYLNGRISAEVLRQAAPDITERTVMTCGPAPYMAQAERLCLQLGVAADRFHKEQFHTP CCCCCCCCHHHHHHHHHCCCHHHCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC AATDGEQGEGLTLRTARPLREFRVPVGSTLLAAMEAHVLPVNAACRAGVCGSCKTRILEG CCCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHEEEEECCHHCCCCCCCCCCEEEEC DYTTTSSMTLTAAEIAQGYVLACSCQLQGDVTLA CCEECCCEEEEHHHHHCCEEEEEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10651802 [H]