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The map label for this gene is ybjT [H]

Identifier: 157369904

GI number: 157369904

Start: 1814771

End: 1816210

Strand: Reverse

Name: ybjT [H]

Synonym: Spro_1661

Alternate gene names: 157369904

Gene position: 1816210-1814771 (Counterclockwise)

Preceding gene: 157369906

Following gene: 157369903

Centisome position: 33.33

GC content: 58.96

Gene sequence:

>1440_bases
ATGACAGCTCAACGCGTACTGGTTCTTGGGGCCAGCGGCTATATCGGCCAAAACCTAATCCCCCACCTGATTGAACAGGG
ACATCACATTACCGCCGCCGCACGTCGCATCGAATGGCTGCAGGAACAGCACTGGCCGCAGGTTAACTGCCAATATGTCG
ACGTTTACCGGCCGGAAACCCTGGCCGCCGCGCTGTGGGAGATCGACGCGGTTTATTATCTGATCCACGGTATGGGCGAT
GGCGATGATTTTATTGAAAAGGAACGCCAGGCCGCTGAAAACCTGCGTGACGCGCTGCGCAGTTCCAGCGTCAAACAGGT
CATTTTTCTCGGTGCATTGCAACCCGAGGGCGACAGCTCGCCACACCTGGTGGCACGCAAGCTGACCGGGGAGATCCTGC
GTCAGAGCGGTGTTCCCGTCACCGAGCTAAGAGCCAGTATTATTGTCGGCCCCGGCTCGGCCGCGTTCGAAATCATGCGC
GATATGGTCTACAACCTGCCGGTGCTTACGCCGCCGCGCTGGGTACGTTCCAAATCTTCTCCGGTGGCGTTGGAAAACCT
GCTGGTATATCTGGCCGATCTGCTGGCGCATCCGGCGGAAGAAAACCGCATTTTTGACGTCGCCGGCCCGGAGTACATCA
GCTACCAGACCATGTTTGAACGCTTTATTGCCATCAGCGGCAAGAAACGCTGGCTGATCCCGATTCCTCTGCCGACCCGT
TTTATCTCGGTCTGGTTTATCAGCATGATCACCTCGGTGCCCACGTCTATCGCCAACGCGCTGATCCAGGGGCTGAACCA
CGATCTGCCCGCCGACGGTAAACCGCTACAGGCGTTAATCCCGCAGACGCTGCAAACCTTCGATCAGGCGGTGACGGCCA
CCCTGCGGCGTGAGGAGGAAGTGGTCGATTCCGCCGACTGGGGTTACGACCCGGAAGCGCGGGCGCGCTGGCGGCCGGGC
TATGGTTTTTATCCGAAGCAGGCGGGTTGCTCGATAGAAACCCAGGCATCCAGCCAAGCCCTGTGGCATACGGTGCAGCA
ACTGGGGGGCAAAGAGGGCTATTTTTACGCCAATATCCTATGGCAGATCCGCGCACGTATGGACGATATGATTGGCAACC
GCGTGGTTTATGGCCGTCCGCAGCGCGACACGCTGGAGGTTGGCGACGTCGTCGACGGCTGGAAAGTGATCACCCTCAAA
CCACAGCGGCTATTGGCACTGCTGTTTGGCATGAAAGCCCCCGGCCTGGGCCGCCTCGCTTTCACCATCAAGGATCACGG
CGACCATCGTACCCTGGACGTACGGGCCTGGTGGCACCCCGCCGGGTTTAGCGGGCTGTTGTATTGGTTCGCCATGATGC
CCGCTCATCTGTTTATTTTTCGCGGTATGGCACGGCGTATTGCCAAACTGGCCGAAGAGCATCCGCGTAATATGCCGTAA

Upstream 100 bases:

>100_bases
GGATGCAATGCCCGCATAACCACACAAAAAGTGCATTTAAACCACGAGTTTGGCATCCTGTGACTATGCTCAACAGACTT
TCACCGCAAAGGCGGCGCTA

Downstream 100 bases:

>100_bases
CAGGCGGCATCCAGATGCTCAATTGTCGATCAACCGCACACTTTGCTGCTGCGGTTAGGCCCTTTCCGATTGCATAGAGC
ACGAAATAACGGAAGAATGG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MTAQRVLVLGASGYIGQNLIPHLIEQGHHITAAARRIEWLQEQHWPQVNCQYVDVYRPETLAAALWEIDAVYYLIHGMGD
GDDFIEKERQAAENLRDALRSSSVKQVIFLGALQPEGDSSPHLVARKLTGEILRQSGVPVTELRASIIVGPGSAAFEIMR
DMVYNLPVLTPPRWVRSKSSPVALENLLVYLADLLAHPAEENRIFDVAGPEYISYQTMFERFIAISGKKRWLIPIPLPTR
FISVWFISMITSVPTSIANALIQGLNHDLPADGKPLQALIPQTLQTFDQAVTATLRREEEVVDSADWGYDPEARARWRPG
YGFYPKQAGCSIETQASSQALWHTVQQLGGKEGYFYANILWQIRARMDDMIGNRVVYGRPQRDTLEVGDVVDGWKVITLK
PQRLLALLFGMKAPGLGRLAFTIKDHGDHRTLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMARRIAKLAEEHPRNMP

Sequences:

>Translated_479_residues
MTAQRVLVLGASGYIGQNLIPHLIEQGHHITAAARRIEWLQEQHWPQVNCQYVDVYRPETLAAALWEIDAVYYLIHGMGD
GDDFIEKERQAAENLRDALRSSSVKQVIFLGALQPEGDSSPHLVARKLTGEILRQSGVPVTELRASIIVGPGSAAFEIMR
DMVYNLPVLTPPRWVRSKSSPVALENLLVYLADLLAHPAEENRIFDVAGPEYISYQTMFERFIAISGKKRWLIPIPLPTR
FISVWFISMITSVPTSIANALIQGLNHDLPADGKPLQALIPQTLQTFDQAVTATLRREEEVVDSADWGYDPEARARWRPG
YGFYPKQAGCSIETQASSQALWHTVQQLGGKEGYFYANILWQIRARMDDMIGNRVVYGRPQRDTLEVGDVVDGWKVITLK
PQRLLALLFGMKAPGLGRLAFTIKDHGDHRTLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMARRIAKLAEEHPRNMP
>Mature_478_residues
TAQRVLVLGASGYIGQNLIPHLIEQGHHITAAARRIEWLQEQHWPQVNCQYVDVYRPETLAAALWEIDAVYYLIHGMGDG
DDFIEKERQAAENLRDALRSSSVKQVIFLGALQPEGDSSPHLVARKLTGEILRQSGVPVTELRASIIVGPGSAAFEIMRD
MVYNLPVLTPPRWVRSKSSPVALENLLVYLADLLAHPAEENRIFDVAGPEYISYQTMFERFIAISGKKRWLIPIPLPTRF
ISVWFISMITSVPTSIANALIQGLNHDLPADGKPLQALIPQTLQTFDQAVTATLRREEEVVDSADWGYDPEARARWRPGY
GFYPKQAGCSIETQASSQALWHTVQQLGGKEGYFYANILWQIRARMDDMIGNRVVYGRPQRDTLEVGDVVDGWKVITLKP
QRLLALLFGMKAPGLGRLAFTIKDHGDHRTLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMARRIAKLAEEHPRNMP

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=471, Percent_Identity=62.8450106157113, Blast_Score=618, Evalue=1e-178,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 54037; Mature: 53906

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQRVLVLGASGYIGQNLIPHLIEQGHHITAAARRIEWLQEQHWPQVNCQYVDVYRPET
CCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH
LAAALWEIDAVYYLIHGMGDGDDFIEKERQAAENLRDALRSSSVKQVIFLGALQPEGDSS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEHEEEEECCCCCCC
PHLVARKLTGEILRQSGVPVTELRASIIVGPGSAAFEIMRDMVYNLPVLTPPRWVRSKSS
HHHHHHHHHHHHHHHCCCCHHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCCCC
PVALENLLVYLADLLAHPAEENRIFDVAGPEYISYQTMFERFIAISGKKRWLIPIPLPTR
CHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHH
FISVWFISMITSVPTSIANALIQGLNHDLPADGKPLQALIPQTLQTFDQAVTATLRREEE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVDSADWGYDPEARARWRPGYGFYPKQAGCSIETQASSQALWHTVQQLGGKEGYFYANIL
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCEEHHHHH
WQIRARMDDMIGNRVVYGRPQRDTLEVGDVVDGWKVITLKPQRLLALLFGMKAPGLGRLA
HHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCEEE
FTIKDHGDHRTLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMARRIAKLAEEHPRNMP
EEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TAQRVLVLGASGYIGQNLIPHLIEQGHHITAAARRIEWLQEQHWPQVNCQYVDVYRPET
CCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH
LAAALWEIDAVYYLIHGMGDGDDFIEKERQAAENLRDALRSSSVKQVIFLGALQPEGDSS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEHEEEEECCCCCCC
PHLVARKLTGEILRQSGVPVTELRASIIVGPGSAAFEIMRDMVYNLPVLTPPRWVRSKSS
HHHHHHHHHHHHHHHCCCCHHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCCCC
PVALENLLVYLADLLAHPAEENRIFDVAGPEYISYQTMFERFIAISGKKRWLIPIPLPTR
CHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHH
FISVWFISMITSVPTSIANALIQGLNHDLPADGKPLQALIPQTLQTFDQAVTATLRREEE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVDSADWGYDPEARARWRPGYGFYPKQAGCSIETQASSQALWHTVQQLGGKEGYFYANIL
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCEEHHHHH
WQIRARMDDMIGNRVVYGRPQRDTLEVGDVVDGWKVITLKPQRLLALLFGMKAPGLGRLA
HHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCEEE
FTIKDHGDHRTLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMARRIAKLAEEHPRNMP
EEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]