| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ybjQ [C]
Identifier: 157369901
GI number: 157369901
Start: 1812285
End: 1812608
Strand: Direct
Name: ybjQ [C]
Synonym: Spro_1658
Alternate gene names: 157369901
Gene position: 1812285-1812608 (Clockwise)
Preceding gene: 157369893
Following gene: 157369902
Centisome position: 33.26
GC content: 54.63
Gene sequence:
>324_bases ATGCAGCTTTCAACCACCCCGACCCTGGAAGGGTTTACCATTACCGAGTATTGCGGCGTTGTCACCGGCGAGGCAATTTT GGGTGCCAATATTTTCCGTGATTTCTTTGCCGGCGTGCGTGACATCGTCGGCGGCCGTTCCGGGGCCTATGAGAAAGAGC TGCGTAAAGCGCGTCTGATCGCCTTCAAGGAACTGGAAGAGCAGGCAAAAGAGTTGGGCGCCAACGCAGTGGTCGGGATT GATATCGATTATGAAACCGTGGGTAAAGACAGCAGCATGCTGATGGTGACCGTCAGCGGCACCGCAGTGAAAGTCAGTCG TTAA
Upstream 100 bases:
>100_bases TTTCTGGCCTTGCATTCGTAGTGCGTGCCATTTCAATACAGAACATAATGCTAAAACGATGGTCAGATAAATGCCATGAA TCAATCAGCAAGGAGTTTTA
Downstream 100 bases:
>100_bases CCCCTTCTTTCACGCCCCGGTAATCTCTGGGGCGTCATAATGATGAGGCTGGCATCTCTGTCATCATTTATTGAATAACT TGATTATTGGATGCAAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MQLSTTPTLEGFTITEYCGVVTGEAILGANIFRDFFAGVRDIVGGRSGAYEKELRKARLIAFKELEEQAKELGANAVVGI DIDYETVGKDSSMLMVTVSGTAVKVSR
Sequences:
>Translated_107_residues MQLSTTPTLEGFTITEYCGVVTGEAILGANIFRDFFAGVRDIVGGRSGAYEKELRKARLIAFKELEEQAKELGANAVVGI DIDYETVGKDSSMLMVTVSGTAVKVSR >Mature_107_residues MQLSTTPTLEGFTITEYCGVVTGEAILGANIFRDFFAGVRDIVGGRSGAYEKELRKARLIAFKELEEQAKELGANAVVGI DIDYETVGKDSSMLMVTVSGTAVKVSR
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family
Homologues:
Organism=Escherichia coli, GI1787091, Length=107, Percent_Identity=84.1121495327103, Blast_Score=181, Evalue=7e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1658_SERP5 (A8GCC2)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001477890.1 - ProteinModelPortal: A8GCC2 - SMR: A8GCC2 - STRING: A8GCC2 - GeneID: 5604106 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_1658 - eggNOG: COG0393 - HOGENOM: HBG339160 - OMA: DFEISMP - ProtClustDB: PRK02877 - BioCyc: SPRO399741:SPRO_1658-MONOMER - HAMAP: MF_00338 - InterPro: IPR002765 - Gene3D: G3DSA:3.30.110.70
Pfam domain/function: PF01906 DUF74
EC number: NA
Molecular weight: Translated: 11510; Mature: 11510
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSTTPTLEGFTITEYCGVVTGEAILGANIFRDFFAGVRDIVGGRSGAYEKELRKARLI CCCCCCCCCCCEEHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AFKELEEQAKELGANAVVGIDIDYETVGKDSSMLMVTVSGTAVKVSR HHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCEEEEEECCCEEEECC >Mature Secondary Structure MQLSTTPTLEGFTITEYCGVVTGEAILGANIFRDFFAGVRDIVGGRSGAYEKELRKARLI CCCCCCCCCCCEEHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AFKELEEQAKELGANAVVGIDIDYETVGKDSSMLMVTVSGTAVKVSR HHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA