Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is gsiC [H]

Identifier: 157369795

GI number: 157369795

Start: 1692364

End: 1693284

Strand: Direct

Name: gsiC [H]

Synonym: Spro_1552

Alternate gene names: 157369795

Gene position: 1692364-1693284 (Clockwise)

Preceding gene: 157369794

Following gene: 157369796

Centisome position: 31.06

GC content: 59.39

Gene sequence:

>921_bases
ATGCTTAATTATTTTCTGAAACGGCTGCTGGGCCTGATCCCGACGCTGCTGATTGTCGCGGTGCTGGTGTTTTTGTTTGT
CCATCTGCTGCCCGGCGATCCGGCACGGTTGGCGGCGGGGCCGGAGGCCGACGAGGCGGTAGTGCAACTGGTGCGTAAGG
ATCTGGGGCTCGACAAGCCGCTACCGCAGCAGTTTGTGCATTTTTTTGTCAATGCTCTGCGGGGGGATTTTGGCACCTCG
ATGGTCTCCAAACGGCCGGTAAGCGAAGAGATTGGCTCGCGCTTTCTGCCGACCCTGTGGCTGACGCTGACCAGCATGCT
GTGGGCGACATTCTTCGGTATGGGCATCGGCATGCTGTCTGCCGTTTGGCGTAACCGCTGGCCGGATCGCATTGGTATGG
CGCTGGCGGTCTCCGGCATTTCATTCCCCGCTTTTGCGCTGGGTATGCTGCTGATGCAGGTGTTCTCGGTCAATCTGGGC
TGGTTACCGACGGTGGGCGCCGACAGCTGGCGGCATTATATTTTGCCCTCCATCACGCTGGGGGCGGCGGTTGCAGCGGT
GATGGCGCGTTTTACCCGCGCCTCGTTCGTTGAGGTGCTGCAGGAAGACTATATGCGCACCGCGCGAGCCAAGGGCGTGC
CGGAAACCCTGGTGGTGGTGAAGCATGGCCTGCGCAATGCGATGATCCCGGTGGTCACCATGATGGGGCTACAGTTCGGC
TTTTTGCTCGGCGGCTCGATCGTGGTGGAAAAGGTCTTCAACTGGCCAGGGCTGGGCAGGCTGCTGGTCGACTCGGTGGA
GATGCGCGACTATCCGGTGATCCAGGCCGAGGTTTTGCTGTTCTCGCTAGAGTTTATTCTGATTAACCTGTTGGTGGACC
TGCTGTATGCGGCAATTAACCCGGCGATACGCTACAAATGA

Upstream 100 bases:

>100_bases
ATGTGATGCCGGATACTTCGTTCAACTTTGATAACGCTGACCTTAAATAAGGCGCCAATCCCCGCTCTCACTGAGGGCGG
GGTGAGGGGATTCACCCGAG

Downstream 100 bases:

>100_bases
GGACGCGGGATGATTAAGCATTGGCGACGCAACGCCGCAATGAAGGCGATGCCGACGATTAACCCTAACGCGGTGCGCAC
ACCGTGGCATGAGTTCTGGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLNYFLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEAVVQLVRKDLGLDKPLPQQFVHFFVNALRGDFGTS
MVSKRPVSEEIGSRFLPTLWLTLTSMLWATFFGMGIGMLSAVWRNRWPDRIGMALAVSGISFPAFALGMLLMQVFSVNLG
WLPTVGADSWRHYILPSITLGAAVAAVMARFTRASFVEVLQEDYMRTARAKGVPETLVVVKHGLRNAMIPVVTMMGLQFG
FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDLLYAAINPAIRYK

Sequences:

>Translated_306_residues
MLNYFLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEAVVQLVRKDLGLDKPLPQQFVHFFVNALRGDFGTS
MVSKRPVSEEIGSRFLPTLWLTLTSMLWATFFGMGIGMLSAVWRNRWPDRIGMALAVSGISFPAFALGMLLMQVFSVNLG
WLPTVGADSWRHYILPSITLGAAVAAVMARFTRASFVEVLQEDYMRTARAKGVPETLVVVKHGLRNAMIPVVTMMGLQFG
FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDLLYAAINPAIRYK
>Mature_306_residues
MLNYFLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEAVVQLVRKDLGLDKPLPQQFVHFFVNALRGDFGTS
MVSKRPVSEEIGSRFLPTLWLTLTSMLWATFFGMGIGMLSAVWRNRWPDRIGMALAVSGISFPAFALGMLLMQVFSVNLG
WLPTVGADSWRHYILPSITLGAAVAAVMARFTRASFVEVLQEDYMRTARAKGVPETLVVVKHGLRNAMIPVVTMMGLQFG
FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDLLYAAINPAIRYK

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=83.0065359477124, Blast_Score=524, Evalue=1e-150,
Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=43.952802359882, Blast_Score=262, Evalue=2e-71,
Organism=Escherichia coli, GI1789888, Length=309, Percent_Identity=39.8058252427184, Blast_Score=207, Evalue=6e-55,
Organism=Escherichia coli, GI1787761, Length=305, Percent_Identity=39.0163934426229, Blast_Score=199, Evalue=1e-52,
Organism=Escherichia coli, GI1787497, Length=310, Percent_Identity=34.5161290322581, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787550, Length=275, Percent_Identity=31.6363636363636, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=26.7955801104972, Blast_Score=111, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33921; Mature: 33921

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYFLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEAVVQLVRKDLGLDKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCC
LPQQFVHFFVNALRGDFGTSMVSKRPVSEEIGSRFLPTLWLTLTSMLWATFFGMGIGMLS
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVWRNRWPDRIGMALAVSGISFPAFALGMLLMQVFSVNLGWLPTVGADSWRHYILPSITL
HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHH
GAAVAAVMARFTRASFVEVLQEDYMRTARAKGVPETLVVVKHGLRNAMIPVVTMMGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDLLYAAIN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PAIRYK
HHHCCC
>Mature Secondary Structure
MLNYFLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEAVVQLVRKDLGLDKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCC
LPQQFVHFFVNALRGDFGTSMVSKRPVSEEIGSRFLPTLWLTLTSMLWATFFGMGIGMLS
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVWRNRWPDRIGMALAVSGISFPAFALGMLLMQVFSVNLGWLPTVGADSWRHYILPSITL
HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHH
GAAVAAVMARFTRASFVEVLQEDYMRTARAKGVPETLVVVKHGLRNAMIPVVTMMGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDLLYAAIN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PAIRYK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA