| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is gsiC [H]
Identifier: 157369795
GI number: 157369795
Start: 1692364
End: 1693284
Strand: Direct
Name: gsiC [H]
Synonym: Spro_1552
Alternate gene names: 157369795
Gene position: 1692364-1693284 (Clockwise)
Preceding gene: 157369794
Following gene: 157369796
Centisome position: 31.06
GC content: 59.39
Gene sequence:
>921_bases ATGCTTAATTATTTTCTGAAACGGCTGCTGGGCCTGATCCCGACGCTGCTGATTGTCGCGGTGCTGGTGTTTTTGTTTGT CCATCTGCTGCCCGGCGATCCGGCACGGTTGGCGGCGGGGCCGGAGGCCGACGAGGCGGTAGTGCAACTGGTGCGTAAGG ATCTGGGGCTCGACAAGCCGCTACCGCAGCAGTTTGTGCATTTTTTTGTCAATGCTCTGCGGGGGGATTTTGGCACCTCG ATGGTCTCCAAACGGCCGGTAAGCGAAGAGATTGGCTCGCGCTTTCTGCCGACCCTGTGGCTGACGCTGACCAGCATGCT GTGGGCGACATTCTTCGGTATGGGCATCGGCATGCTGTCTGCCGTTTGGCGTAACCGCTGGCCGGATCGCATTGGTATGG CGCTGGCGGTCTCCGGCATTTCATTCCCCGCTTTTGCGCTGGGTATGCTGCTGATGCAGGTGTTCTCGGTCAATCTGGGC TGGTTACCGACGGTGGGCGCCGACAGCTGGCGGCATTATATTTTGCCCTCCATCACGCTGGGGGCGGCGGTTGCAGCGGT GATGGCGCGTTTTACCCGCGCCTCGTTCGTTGAGGTGCTGCAGGAAGACTATATGCGCACCGCGCGAGCCAAGGGCGTGC CGGAAACCCTGGTGGTGGTGAAGCATGGCCTGCGCAATGCGATGATCCCGGTGGTCACCATGATGGGGCTACAGTTCGGC TTTTTGCTCGGCGGCTCGATCGTGGTGGAAAAGGTCTTCAACTGGCCAGGGCTGGGCAGGCTGCTGGTCGACTCGGTGGA GATGCGCGACTATCCGGTGATCCAGGCCGAGGTTTTGCTGTTCTCGCTAGAGTTTATTCTGATTAACCTGTTGGTGGACC TGCTGTATGCGGCAATTAACCCGGCGATACGCTACAAATGA
Upstream 100 bases:
>100_bases ATGTGATGCCGGATACTTCGTTCAACTTTGATAACGCTGACCTTAAATAAGGCGCCAATCCCCGCTCTCACTGAGGGCGG GGTGAGGGGATTCACCCGAG
Downstream 100 bases:
>100_bases GGACGCGGGATGATTAAGCATTGGCGACGCAACGCCGCAATGAAGGCGATGCCGACGATTAACCCTAACGCGGTGCGCAC ACCGTGGCATGAGTTCTGGC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLNYFLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEAVVQLVRKDLGLDKPLPQQFVHFFVNALRGDFGTS MVSKRPVSEEIGSRFLPTLWLTLTSMLWATFFGMGIGMLSAVWRNRWPDRIGMALAVSGISFPAFALGMLLMQVFSVNLG WLPTVGADSWRHYILPSITLGAAVAAVMARFTRASFVEVLQEDYMRTARAKGVPETLVVVKHGLRNAMIPVVTMMGLQFG FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDLLYAAINPAIRYK
Sequences:
>Translated_306_residues MLNYFLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEAVVQLVRKDLGLDKPLPQQFVHFFVNALRGDFGTS MVSKRPVSEEIGSRFLPTLWLTLTSMLWATFFGMGIGMLSAVWRNRWPDRIGMALAVSGISFPAFALGMLLMQVFSVNLG WLPTVGADSWRHYILPSITLGAAVAAVMARFTRASFVEVLQEDYMRTARAKGVPETLVVVKHGLRNAMIPVVTMMGLQFG FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDLLYAAINPAIRYK >Mature_306_residues MLNYFLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEAVVQLVRKDLGLDKPLPQQFVHFFVNALRGDFGTS MVSKRPVSEEIGSRFLPTLWLTLTSMLWATFFGMGIGMLSAVWRNRWPDRIGMALAVSGISFPAFALGMLLMQVFSVNLG WLPTVGADSWRHYILPSITLGAAVAAVMARFTRASFVEVLQEDYMRTARAKGVPETLVVVKHGLRNAMIPVVTMMGLQFG FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDLLYAAINPAIRYK
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0601
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=83.0065359477124, Blast_Score=524, Evalue=1e-150, Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=43.952802359882, Blast_Score=262, Evalue=2e-71, Organism=Escherichia coli, GI1789888, Length=309, Percent_Identity=39.8058252427184, Blast_Score=207, Evalue=6e-55, Organism=Escherichia coli, GI1787761, Length=305, Percent_Identity=39.0163934426229, Blast_Score=199, Evalue=1e-52, Organism=Escherichia coli, GI1787497, Length=310, Percent_Identity=34.5161290322581, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI1787550, Length=275, Percent_Identity=31.6363636363636, Blast_Score=151, Evalue=6e-38, Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=26.7955801104972, Blast_Score=111, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33921; Mature: 33921
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNYFLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEAVVQLVRKDLGLDKP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCC LPQQFVHFFVNALRGDFGTSMVSKRPVSEEIGSRFLPTLWLTLTSMLWATFFGMGIGMLS CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVWRNRWPDRIGMALAVSGISFPAFALGMLLMQVFSVNLGWLPTVGADSWRHYILPSITL HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHH GAAVAAVMARFTRASFVEVLQEDYMRTARAKGVPETLVVVKHGLRNAMIPVVTMMGLQFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDLLYAAIN HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAIRYK HHHCCC >Mature Secondary Structure MLNYFLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEAVVQLVRKDLGLDKP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCC LPQQFVHFFVNALRGDFGTSMVSKRPVSEEIGSRFLPTLWLTLTSMLWATFFGMGIGMLS CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVWRNRWPDRIGMALAVSGISFPAFALGMLLMQVFSVNLGWLPTVGADSWRHYILPSITL HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHH GAAVAAVMARFTRASFVEVLQEDYMRTARAKGVPETLVVVKHGLRNAMIPVVTMMGLQFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDLLYAAIN HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAIRYK HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA