| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is gsiD [H]
Identifier: 157369796
GI number: 157369796
Start: 1693294
End: 1694202
Strand: Direct
Name: gsiD [H]
Synonym: Spro_1553
Alternate gene names: 157369796
Gene position: 1693294-1694202 (Clockwise)
Preceding gene: 157369795
Following gene: 157369797
Centisome position: 31.08
GC content: 58.53
Gene sequence:
>909_bases ATGATTAAGCATTGGCGACGCAACGCCGCAATGAAGGCGATGCCGACGATTAACCCTAACGCGGTGCGCACACCGTGGCA TGAGTTCTGGCGGCGGTTCCGCCAGCAACGTGTGGCGCTGGTCGCCGGGCTGTTGGTGCTGTTGCTGGTGGTTGCCGCGT TATTGGCACCTTACCTGGTGCCGTTTGATGCGGAAAACTACTTTGATTATGACCGCCTGAACGAAGGCCCTTCGCTGGTG CACTGGTTGGGGGTAGATTCCCTTGGGCGAGATATTTTCAGCCGCATTCTGATGGGCGCTCGTATTTCGCTGGCCGCCGG GGTGTTCTCGGTGCTGGTCGGCGGGCTGATCGGCACGCTGCTGGGCCTGTTGGCCGGTTATTATGAGGGCTGGTGGGACC GTATCACCATGCGTATCTGTGACGTGCTGTTTGCCTTTCCCGGTATTTTATTGGCGATTGGCGTGGTAGCGATTATGGGC AGCGGTATGTCCAACGTGATCATTGCAGTGGCGATTTTCAGCATTCCGGCGTTTGCCCGGCTGGTACGCGGCAATACGCT GGTATTGAAGCACCTGACCTATATCGAGTCGGCGCGCAGCATCGGGGCTTCCGACTGGACCATCATCCTGCGACATATAC TGCCGGGGACGATTTCGTCGATTGTGGTGTATTTTACCATGCGTATCGGCACCTCGATCATTACCGCCGCCAGCCTGTCA TTCCTCGGCCTGGGCGCGCAGCCACCAACGCCGGAGTGGGGTGCGATGCTCAATGAGGCTCGGGCGGACATGGTGATGGC ACCGCACGTGGCGATTTTCCCCAGTCTGGCAATATTCATCACCGTACTGGCGTTCAACCTGCTGGGTGACGGGCTGCGCG ACGCGCTGGATCCGAAATTAAAAGGGTAG
Upstream 100 bases:
>100_bases GGTTTTGCTGTTCTCGCTAGAGTTTATTCTGATTAACCTGTTGGTGGACCTGCTGTATGCGGCAATTAACCCGGCGATAC GCTACAAATGAGGACGCGGG
Downstream 100 bases:
>100_bases AATAAGGTCAAATTAATAGCGGTTAATATGCGGGGTGTTAATCGTTTAATTAACTGAGACATTTTAACGTATTCGGTAAA TCAACCGAATACGTTAATAT
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MIKHWRRNAAMKAMPTINPNAVRTPWHEFWRRFRQQRVALVAGLLVLLLVVAALLAPYLVPFDAENYFDYDRLNEGPSLV HWLGVDSLGRDIFSRILMGARISLAAGVFSVLVGGLIGTLLGLLAGYYEGWWDRITMRICDVLFAFPGILLAIGVVAIMG SGMSNVIIAVAIFSIPAFARLVRGNTLVLKHLTYIESARSIGASDWTIILRHILPGTISSIVVYFTMRIGTSIITAASLS FLGLGAQPPTPEWGAMLNEARADMVMAPHVAIFPSLAIFITVLAFNLLGDGLRDALDPKLKG
Sequences:
>Translated_302_residues MIKHWRRNAAMKAMPTINPNAVRTPWHEFWRRFRQQRVALVAGLLVLLLVVAALLAPYLVPFDAENYFDYDRLNEGPSLV HWLGVDSLGRDIFSRILMGARISLAAGVFSVLVGGLIGTLLGLLAGYYEGWWDRITMRICDVLFAFPGILLAIGVVAIMG SGMSNVIIAVAIFSIPAFARLVRGNTLVLKHLTYIESARSIGASDWTIILRHILPGTISSIVVYFTMRIGTSIITAASLS FLGLGAQPPTPEWGAMLNEARADMVMAPHVAIFPSLAIFITVLAFNLLGDGLRDALDPKLKG >Mature_302_residues MIKHWRRNAAMKAMPTINPNAVRTPWHEFWRRFRQQRVALVAGLLVLLLVVAALLAPYLVPFDAENYFDYDRLNEGPSLV HWLGVDSLGRDIFSRILMGARISLAAGVFSVLVGGLIGTLLGLLAGYYEGWWDRITMRICDVLFAFPGILLAIGVVAIMG SGMSNVIIAVAIFSIPAFARLVRGNTLVLKHLTYIESARSIGASDWTIILRHILPGTISSIVVYFTMRIGTSIITAASLS FLGLGAQPPTPEWGAMLNEARADMVMAPHVAIFPSLAIFITVLAFNLLGDGLRDALDPKLKG
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=299, Percent_Identity=79.933110367893, Blast_Score=501, Evalue=1e-143, Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=39.2452830188679, Blast_Score=205, Evalue=2e-54, Organism=Escherichia coli, GI1789964, Length=283, Percent_Identity=40.6360424028269, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI1787498, Length=279, Percent_Identity=37.6344086021505, Blast_Score=171, Evalue=5e-44, Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=38.7755102040816, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI1787549, Length=286, Percent_Identity=33.2167832167832, Blast_Score=134, Evalue=7e-33, Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33027; Mature: 33027
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKHWRRNAAMKAMPTINPNAVRTPWHEFWRRFRQQRVALVAGLLVLLLVVAALLAPYLV CCCCHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PFDAENYFDYDRLNEGPSLVHWLGVDSLGRDIFSRILMGARISLAAGVFSVLVGGLIGTL CCCCCCCCCHHHCCCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLLAGYYEGWWDRITMRICDVLFAFPGILLAIGVVAIMGSGMSNVIIAVAIFSIPAFAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LVRGNTLVLKHLTYIESARSIGASDWTIILRHILPGTISSIVVYFTMRIGTSIITAASLS HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FLGLGAQPPTPEWGAMLNEARADMVMAPHVAIFPSLAIFITVLAFNLLGDGLRDALDPKL HHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KG CC >Mature Secondary Structure MIKHWRRNAAMKAMPTINPNAVRTPWHEFWRRFRQQRVALVAGLLVLLLVVAALLAPYLV CCCCHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PFDAENYFDYDRLNEGPSLVHWLGVDSLGRDIFSRILMGARISLAAGVFSVLVGGLIGTL CCCCCCCCCHHHCCCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLLAGYYEGWWDRITMRICDVLFAFPGILLAIGVVAIMGSGMSNVIIAVAIFSIPAFAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LVRGNTLVLKHLTYIESARSIGASDWTIILRHILPGTISSIVVYFTMRIGTSIITAASLS HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FLGLGAQPPTPEWGAMLNEARADMVMAPHVAIFPSLAIFITVLAFNLLGDGLRDALDPKL HHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]