Click here to switch to the map view.

The map label for this gene is fimA [H]

Identifier: 157369762

GI number: 157369762

Start: 1656522

End: 1657049

Strand: Direct

Name: fimA [H]

Synonym: Spro_1519

Alternate gene names: 157369762

Gene position: 1656522-1657049 (Clockwise)

Preceding gene: 157369758

Following gene: 157369763

Centisome position: 30.4

GC content: 47.92

Gene sequence:

>528_bases
ATGAAAAAAGTATTATTGCCTTTGGCCGCGCTGGTATTGTCTGCTACTGCTTATAACGCTACTGCTGCAAGCGGCAACGT
TAAATTCACCGGTGAAATCGTACAGTCTACCTGTAAAGTAGTTGATAAAGACCAGAATAAAGAAGTTTACCTGGGTAAAT
ATCCTACTACCGCATTCCCAACTTCTGGTTCTACCAGCGGTGCTAAAGCTTTCGATATTAGCCTGGAGAAATGTGAAGCA
GGTAACTACACCCTGCGTTTCGACGGTAACACCCCAGCTGGTCACCCAGAGCTGTTGGCTGTAACTGGCGGCGCTAACGG
CGTTGGCGTTGAAATCCTGGATAACAACGGCGCAACTCTGCCAATCTCTCAGGAAGTTGCTACTCCAGCTACCGTTTCTG
TTGCTGCTGATGGCGACAACCCAGGTTCTGCGACTTTCAACCTGCGCGCTCGTTATAAATCTTACCAGGATCTGGTAACT
GCGGGTCAGGCAAACTCTAACGCTACCTTCACCATCGAATACAAATAA

Upstream 100 bases:

>100_bases
AGCAAGGAGTGCTATCGCTGAGTGTATGCTCAGTGCCGGGTCGGTATATATTCATCTGTCACTGAATCGATTATTTTATT
GTTTTTCTATGGAGCTGGAA

Downstream 100 bases:

>100_bases
TTTAATTCGCTGGCAGGATAGATAGAGCTATTGGCCATGGACGGCTAAATTCTGAGAGTTGAGATATTCCGATGAAAAAA
GTGCTTTCTTGTATTTTACT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKKVLLPLAALVLSATAYNATAASGNVKFTGEIVQSTCKVVDKDQNKEVYLGKYPTTAFPTSGSTSGAKAFDISLEKCEA
GNYTLRFDGNTPAGHPELLAVTGGANGVGVEILDNNGATLPISQEVATPATVSVAADGDNPGSATFNLRARYKSYQDLVT
AGQANSNATFTIEYK

Sequences:

>Translated_175_residues
MKKVLLPLAALVLSATAYNATAASGNVKFTGEIVQSTCKVVDKDQNKEVYLGKYPTTAFPTSGSTSGAKAFDISLEKCEA
GNYTLRFDGNTPAGHPELLAVTGGANGVGVEILDNNGATLPISQEVATPATVSVAADGDNPGSATFNLRARYKSYQDLVT
AGQANSNATFTIEYK
>Mature_175_residues
MKKVLLPLAALVLSATAYNATAASGNVKFTGEIVQSTCKVVDKDQNKEVYLGKYPTTAFPTSGSTSGAKAFDISLEKCEA
GNYTLRFDGNTPAGHPELLAVTGGANGVGVEILDNNGATLPISQEVATPATVSVAADGDNPGSATFNLRARYKSYQDLVT
AGQANSNATFTIEYK

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787781, Length=170, Percent_Identity=32.9411764705882, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI87081753, Length=168, Percent_Identity=35.1190476190476, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI87082421, Length=177, Percent_Identity=28.2485875706215, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1786746, Length=179, Percent_Identity=30.7262569832402, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1790769, Length=159, Percent_Identity=32.7044025157233, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18158; Mature: 18158

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLLPLAALVLSATAYNATAASGNVKFTGEIVQSTCKVVDKDQNKEVYLGKYPTTAFP
CCCHHHHHHHHHHHHHCCCCEECCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
TSGSTSGAKAFDISLEKCEAGNYTLRFDGNTPAGHPELLAVTGGANGVGVEILDNNGATL
CCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCEE
PISQEVATPATVSVAADGDNPGSATFNLRARYKSYQDLVTAGQANSNATFTIEYK
EECCCCCCCEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCEEEEEEC
>Mature Secondary Structure
MKKVLLPLAALVLSATAYNATAASGNVKFTGEIVQSTCKVVDKDQNKEVYLGKYPTTAFP
CCCHHHHHHHHHHHHHCCCCEECCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
TSGSTSGAKAFDISLEKCEAGNYTLRFDGNTPAGHPELLAVTGGANGVGVEILDNNGATL
CCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCEE
PISQEVATPATVSVAADGDNPGSATFNLRARYKSYQDLVTAGQANSNATFTIEYK
EECCCCCCCEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1982455 [H]