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The map label for this gene is ompX [H]

Identifier: 157369727

GI number: 157369727

Start: 1619163

End: 1619681

Strand: Direct

Name: ompX [H]

Synonym: Spro_1484

Alternate gene names: 157369727

Gene position: 1619163-1619681 (Clockwise)

Preceding gene: 157369718

Following gene: 157369729

Centisome position: 29.72

GC content: 53.56

Gene sequence:

>519_bases
ATGAAAAAAATTGCATGTCTTTCCGCAGTAGCAGCCTGTGTATTAGCAGTAACCGCAGGTACCGCATTCGCTGGCCAGAG
CACCGTATCCGCAGGCTATGCGCAGGGTGATCTCCAAGGCGTTGCCAACAAAGCCGACGGTTTCAACCTGAAGTACCGTT
ACGAGTTCGACAACAACCCACTGGGTGTGATCGGTTCCTTTACCCACGTGGAAAAGAACGGTTCTGAGAACGGTTACTAC
GGTAAAGCTCAGTACAACTCTATCACTGCTGGTCCAGCTTACCGCTTCAACGACTGGGCAAGCATCTACGGTGTAGTTGG
TGTTGGCTACGGCAAAAACATCGACAACGCCCAAAACGGTTCTGACCGTAACGGCAGCAGCGACTACGGCTTCACCTACG
GTGCTGGCCTGCAGTTCAACCCAATCCAGGACGTAGCTCTGGACGTGGGTTACGAGCAGAGCCGTATCCGCAGCGTTGAC
GTTGGCATCTGGAGCGTTGGCGTAGGCTACCGTTTCTAA

Upstream 100 bases:

>100_bases
AGACACTCATTTTAAGGCAGAGTTTCACGCTAATTTTTGTTATATTTTCAATGCATGAACAAATGGATTTACTTAAAAAT
ATAACGCGTTTGAGGTGGTT

Downstream 100 bases:

>100_bases
GATTTCTCCACGCCTACGGGTGTGAGCGTGTGTCGCAATTGGCCGCATCAGATAAAAATCCGCCCTCGGGCGGATTTTTT
TTGCCTGTCATTCGGCGCGG

Product: outer membrane protein X

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKIACLSAVAACVLAVTAGTAFAGQSTVSAGYAQGDLQGVANKADGFNLKYRYEFDNNPLGVIGSFTHVEKNGSENGYY
GKAQYNSITAGPAYRFNDWASIYGVVGVGYGKNIDNAQNGSDRNGSSDYGFTYGAGLQFNPIQDVALDVGYEQSRIRSVD
VGIWSVGVGYRF

Sequences:

>Translated_172_residues
MKKIACLSAVAACVLAVTAGTAFAGQSTVSAGYAQGDLQGVANKADGFNLKYRYEFDNNPLGVIGSFTHVEKNGSENGYY
GKAQYNSITAGPAYRFNDWASIYGVVGVGYGKNIDNAQNGSDRNGSSDYGFTYGAGLQFNPIQDVALDVGYEQSRIRSVD
VGIWSVGVGYRF
>Mature_172_residues
MKKIACLSAVAACVLAVTAGTAFAGQSTVSAGYAQGDLQGVANKADGFNLKYRYEFDNNPLGVIGSFTHVEKNGSENGYY
GKAQYNSITAGPAYRFNDWASIYGVVGVGYGKNIDNAQNGSDRNGSSDYGFTYGAGLQFNPIQDVALDVGYEQSRIRSVD
VGIWSVGVGYRF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ail/ompX/pagC/lom family [H]

Homologues:

Organism=Escherichia coli, GI1787034, Length=173, Percent_Identity=68.7861271676301, Blast_Score=226, Evalue=7e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000758
- InterPro:   IPR011250 [H]

Pfam domain/function: PF06316 Ail_Lom [H]

EC number: NA

Molecular weight: Translated: 18264; Mature: 18264

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00694 ENT_VIR_OMP_1 ; PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIACLSAVAACVLAVTAGTAFAGQSTVSAGYAQGDLQGVANKADGFNLKYRYEFDNNP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCC
LGVIGSFTHVEKNGSENGYYGKAQYNSITAGPAYRFNDWASIYGVVGVGYGKNIDNAQNG
CEEEECEEEEECCCCCCCEECCEECCEEECCCCEEECCHHHEEEEEECCCCCCCCCCCCC
SDRNGSSDYGFTYGAGLQFNPIQDVALDVGYEQSRIRSVDVGIWSVGVGYRF
CCCCCCCCCCEEECCCCEECCHHHHHEECCCCHHHEEEEECEEEEECCCCCC
>Mature Secondary Structure
MKKIACLSAVAACVLAVTAGTAFAGQSTVSAGYAQGDLQGVANKADGFNLKYRYEFDNNP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCC
LGVIGSFTHVEKNGSENGYYGKAQYNSITAGPAYRFNDWASIYGVVGVGYGKNIDNAQNG
CEEEECEEEEECCCCCCCEECCEECCEEECCCCEEECCHHHEEEEEECCCCCCCCCCCCC
SDRNGSSDYGFTYGAGLQFNPIQDVALDVGYEQSRIRSVDVGIWSVGVGYRF
CCCCCCCCCCEEECCCCEECCHHHHHEECCCCHHHEEEEECEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]