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The map label for this gene is ntaR [H]

Identifier: 157369663

GI number: 157369663

Start: 1551681

End: 1552391

Strand: Direct

Name: ntaR [H]

Synonym: Spro_1420

Alternate gene names: 157369663

Gene position: 1551681-1552391 (Clockwise)

Preceding gene: 157369662

Following gene: 157369664

Centisome position: 28.48

GC content: 57.52

Gene sequence:

>711_bases
ATGCAAATCACCAATAACCGCAATAAGGCACGGCCGGAGGGGCTGGCGGAGCGCATCTACCTGCAGCTCAAGGACGATAT
TTTTGATTTTCAGCTGCTGCCGGGCGACCGCTTTAGCGAAAACGAAGTGGCGCTACGCATGGACGTCAGCCGCACGCCGG
TACGTCAGGCTTTGTTTTGGCTGGAGCGCGAGGGGTATGTCGAAGTGCATTTCCGTAGCGGTTGGCAGGTGCGACCGTTC
GATTTTGCCTACTTCGAGGAGCTGTATGACCTGCGTATCGTGCTGGAGTGTGAGGCGGTTAAACGGCTGTGCGCGCGGCC
AATGGATGAAGTGCCGTTGCAACTGGAGGCGCTCGGCAGTTTCTGGATCGACGAGCCACGGTTGGAGGACGGCAAAACTG
TTTCGCTGCACGACGAACAGTTCCATATGGCGCTGGTGGCGGCGGCGGGCAACGGCGAAATGGCACGCATTCATCGCGAT
CTGACCGAGAAAATTCGCATCATTCGTCGGCTGGACTTCACCCAGGGCAGCCGGGTGGAGGCGACCTATAACGAACACGC
CGCCATTTTGCGGGCGATCCTGCAACAGCAAACCGGGGAGGCGCAAACGCTGCTCAGTAACCATATTGCCGTCAGTAAGG
CTGAGGTCAGAAAAATAACCCTGCATATGTTGCATCAAGCACGCCTCCAGCTACCAGACAGTCCTACGTGA

Upstream 100 bases:

>100_bases
GCCGGTCGGGCCGGGCGACGCCCTGCTGTGGCTGGAGCACGCCAGTTAACCCTGTTTAATCGTCGGGGCGCGGCAGGCTG
CGCCCGCAGAGAGGAATGCG

Downstream 100 bases:

>100_bases
GTTTTTCTGAACCTGTTTTCCAACACACATCAGGAGTTTGAACTATGCAACGTCGTCACTTTATAAAAGCTTTCGCGCTG
TCTGCCAGCATGGTCGGTAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MQITNNRNKARPEGLAERIYLQLKDDIFDFQLLPGDRFSENEVALRMDVSRTPVRQALFWLEREGYVEVHFRSGWQVRPF
DFAYFEELYDLRIVLECEAVKRLCARPMDEVPLQLEALGSFWIDEPRLEDGKTVSLHDEQFHMALVAAAGNGEMARIHRD
LTEKIRIIRRLDFTQGSRVEATYNEHAAILRAILQQQTGEAQTLLSNHIAVSKAEVRKITLHMLHQARLQLPDSPT

Sequences:

>Translated_236_residues
MQITNNRNKARPEGLAERIYLQLKDDIFDFQLLPGDRFSENEVALRMDVSRTPVRQALFWLEREGYVEVHFRSGWQVRPF
DFAYFEELYDLRIVLECEAVKRLCARPMDEVPLQLEALGSFWIDEPRLEDGKTVSLHDEQFHMALVAAAGNGEMARIHRD
LTEKIRIIRRLDFTQGSRVEATYNEHAAILRAILQQQTGEAQTLLSNHIAVSKAEVRKITLHMLHQARLQLPDSPT
>Mature_236_residues
MQITNNRNKARPEGLAERIYLQLKDDIFDFQLLPGDRFSENEVALRMDVSRTPVRQALFWLEREGYVEVHFRSGWQVRPF
DFAYFEELYDLRIVLECEAVKRLCARPMDEVPLQLEALGSFWIDEPRLEDGKTVSLHDEQFHMALVAAAGNGEMARIHRD
LTEKIRIIRRLDFTQGSRVEATYNEHAAILRAILQQQTGEAQTLLSNHIAVSKAEVRKITLHMLHQARLQLPDSPT

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=223, Percent_Identity=26.0089686098655, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27396; Mature: 27396

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQITNNRNKARPEGLAERIYLQLKDDIFDFQLLPGDRFSENEVALRMDVSRTPVRQALFW
CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHH
LEREGYVEVHFRSGWQVRPFDFAYFEELYDLRIVLECEAVKRLCARPMDEVPLQLEALGS
HCCCCEEEEEECCCCEECCCCHHHHHHHHHEEEEEEHHHHHHHHCCCHHHCCEEHHHHHH
FWIDEPRLEDGKTVSLHDEQFHMALVAAAGNGEMARIHRDLTEKIRIIRRLDFTQGSRVE
HCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
ATYNEHAAILRAILQQQTGEAQTLLSNHIAVSKAEVRKITLHMLHQARLQLPDSPT
ECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQITNNRNKARPEGLAERIYLQLKDDIFDFQLLPGDRFSENEVALRMDVSRTPVRQALFW
CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHH
LEREGYVEVHFRSGWQVRPFDFAYFEELYDLRIVLECEAVKRLCARPMDEVPLQLEALGS
HCCCCEEEEEECCCCEECCCCHHHHHHHHHEEEEEEHHHHHHHHCCCHHHCCEEHHHHHH
FWIDEPRLEDGKTVSLHDEQFHMALVAAAGNGEMARIHRDLTEKIRIIRRLDFTQGSRVE
HCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
ATYNEHAAILRAILQQQTGEAQTLLSNHIAVSKAEVRKITLHMLHQARLQLPDSPT
ECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA