| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369586
Identifier: 157369586
GI number: 157369586
Start: 1473187
End: 1474485
Strand: Reverse
Name: 157369586
Synonym: Spro_1343
Alternate gene names: NA
Gene position: 1474485-1473187 (Counterclockwise)
Preceding gene: 157369588
Following gene: 157369584
Centisome position: 27.06
GC content: 53.73
Gene sequence:
>1299_bases ATGAAATTAAAATTCATAGATATCAATATCGTGAGAAATGCGTTTTGGATGATATCCGAAAAAATGGTGTCTATCCTTGG CGTTATTTTTATCACCGCCTATATGGCGAGATATATCGGCCCGGAAAGCTTTGGCAAAATCACCTTTGCCACCGCGATTT TCGCCATTACTCAAACGCTGGCGCTGCTGGGCTCTGATACCGTACTGTTCAAGCGGATTAGCCGCAACCCAGCCTCGGGA ACGGCATTGATGTTTTCCACCAACCGGCTGCGTCAGGGCTGCTTTGTGCTGTTCTCTGCGGCAATATTGATTTACACCGG GCTACGGGAAGATTTCATTACCTTCTACTTTTGCGCCGCCACCTTTGTCGCCAGCTTCTTCTCACTCAGGGACGTTTTCA CCATCTATCATGATGCCCGGCTGGAATCGCGCTTCAATACGCTGGCCAACGTCAGCGGGCTGGGCAGTGCGCTGCTGGTG CGTTATCTGATCGTTTATTTTGACCTGCACCTGTATTACCTGGCGATCCCGATCGTGATGGTTTATTTGATCCCCTACCT GATCCGCCACCATATCTATCACCGCCGTAATCCGCGCTTTGTCGCACCAGGGCGCGTTCGCCGCAAATACGTGCGCTATC TGCTCGCCAGCGGCCTGCCCCTGGCGGTTTCCAATGTCTCCATCGCCATCTACACCCGGCTGGCACAGTTGTTCCTGATG TGGTTCGTCTCCGCCGAAGCGCTGGGAATTTACTCCGTTGCCATTACGCTGGCCACCGCCTGGATGTTTGTCACCGATGC GGTGATCACCTCGTTTTTCGCTAAAATATTCGCTTATCAACGTGATGACGCCATGCGCACCGCCGCCAAACTCAATGGGC TGGTGCTGGCGATTGCCGCCGCGATCGTCGCCGGCATCTTTTTGCTCGGCAAACCGGTGATTGTGCTGCTGTACGGCGAG CAGTATTTAGCGGCTTTCCCGGCGATGGGGGTGTTGGCGGTTGCCACCCTGCTTTCCGCCCTGGGTACCCTGGCCTACAA ATACATTGTGATTTTCTCCGGCTACGGTTTCTTGTCGAAGAAGATGTTCCTGGTATTTATCATCAATATTCCGCTGTCAT ACTGCCTGATCCGCCAATACGGCATGATGGGCGCGGCCTACAGCACCCTGCTGACCGAATTGTTGTCGCTGACCCTCCTC AACTACTTCTTCCGCCGTGGCACCGTATTGCAGATGCACCTGCGCTCGCTCAATCCTTTGACCTATATCCGGCGACCGGT TAGTCGCATCAACGGCTAG
Upstream 100 bases:
>100_bases TTATTGCATCTTAATTATAAAACCCTGTGGGTCATTCCTTACAGAGGGTAAGGAAATAATCGGATGATTCCTATTATAAG ATGCGACAGGGAAAGTCCCC
Downstream 100 bases:
>100_bases CTCTCCAGCTCGACCACCCTTACGTACAAGGCCGCAAGTAGCGACAGGTCAATCAACATGGCAAAAGCGTAGGGAAAACC CGTTATTCCGCTAAAACTCG
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Polysaccharide Biosynthesis Export Protein; Methyltransferase FkbM Family; Lipopolysaccharide/O-Antigen Transporter; PST Family Transporter
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKLKFIDINIVRNAFWMISEKMVSILGVIFITAYMARYIGPESFGKITFATAIFAITQTLALLGSDTVLFKRISRNPASG TALMFSTNRLRQGCFVLFSAAILIYTGLREDFITFYFCAATFVASFFSLRDVFTIYHDARLESRFNTLANVSGLGSALLV RYLIVYFDLHLYYLAIPIVMVYLIPYLIRHHIYHRRNPRFVAPGRVRRKYVRYLLASGLPLAVSNVSIAIYTRLAQLFLM WFVSAEALGIYSVAITLATAWMFVTDAVITSFFAKIFAYQRDDAMRTAAKLNGLVLAIAAAIVAGIFLLGKPVIVLLYGE QYLAAFPAMGVLAVATLLSALGTLAYKYIVIFSGYGFLSKKMFLVFIINIPLSYCLIRQYGMMGAAYSTLLTELLSLTLL NYFFRRGTVLQMHLRSLNPLTYIRRPVSRING
Sequences:
>Translated_432_residues MKLKFIDINIVRNAFWMISEKMVSILGVIFITAYMARYIGPESFGKITFATAIFAITQTLALLGSDTVLFKRISRNPASG TALMFSTNRLRQGCFVLFSAAILIYTGLREDFITFYFCAATFVASFFSLRDVFTIYHDARLESRFNTLANVSGLGSALLV RYLIVYFDLHLYYLAIPIVMVYLIPYLIRHHIYHRRNPRFVAPGRVRRKYVRYLLASGLPLAVSNVSIAIYTRLAQLFLM WFVSAEALGIYSVAITLATAWMFVTDAVITSFFAKIFAYQRDDAMRTAAKLNGLVLAIAAAIVAGIFLLGKPVIVLLYGE QYLAAFPAMGVLAVATLLSALGTLAYKYIVIFSGYGFLSKKMFLVFIINIPLSYCLIRQYGMMGAAYSTLLTELLSLTLL NYFFRRGTVLQMHLRSLNPLTYIRRPVSRING >Mature_432_residues MKLKFIDINIVRNAFWMISEKMVSILGVIFITAYMARYIGPESFGKITFATAIFAITQTLALLGSDTVLFKRISRNPASG TALMFSTNRLRQGCFVLFSAAILIYTGLREDFITFYFCAATFVASFFSLRDVFTIYHDARLESRFNTLANVSGLGSALLV RYLIVYFDLHLYYLAIPIVMVYLIPYLIRHHIYHRRNPRFVAPGRVRRKYVRYLLASGLPLAVSNVSIAIYTRLAQLFLM WFVSAEALGIYSVAITLATAWMFVTDAVITSFFAKIFAYQRDDAMRTAAKLNGLVLAIAAAIVAGIFLLGKPVIVLLYGE QYLAAFPAMGVLAVATLLSALGTLAYKYIVIFSGYGFLSKKMFLVFIINIPLSYCLIRQYGMMGAAYSTLLTELLSLTLL NYFFRRGTVLQMHLRSLNPLTYIRRPVSRING
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48659; Mature: 48659
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKFIDINIVRNAFWMISEKMVSILGVIFITAYMARYIGPESFGKITFATAIFAITQTL CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHH ALLGSDTVLFKRISRNPASGTALMFSTNRLRQGCFVLFSAAILIYTGLREDFITFYFCAA HHHCCCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TFVASFFSLRDVFTIYHDARLESRFNTLANVSGLGSALLVRYLIVYFDLHLYYLAIPIVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VYLIPYLIRHHIYHRRNPRFVAPGRVRRKYVRYLLASGLPLAVSNVSIAIYTRLAQLFLM HHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHH WFVSAEALGIYSVAITLATAWMFVTDAVITSFFAKIFAYQRDDAMRTAAKLNGLVLAIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AIVAGIFLLGKPVIVLLYGEQYLAAFPAMGVLAVATLLSALGTLAYKYIVIFSGYGFLSK HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHH KMFLVFIINIPLSYCLIRQYGMMGAAYSTLLTELLSLTLLNYFFRRGTVLQMHLRSLNPL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH TYIRRPVSRING HHHHHHHHHCCC >Mature Secondary Structure MKLKFIDINIVRNAFWMISEKMVSILGVIFITAYMARYIGPESFGKITFATAIFAITQTL CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHH ALLGSDTVLFKRISRNPASGTALMFSTNRLRQGCFVLFSAAILIYTGLREDFITFYFCAA HHHCCCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TFVASFFSLRDVFTIYHDARLESRFNTLANVSGLGSALLVRYLIVYFDLHLYYLAIPIVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VYLIPYLIRHHIYHRRNPRFVAPGRVRRKYVRYLLASGLPLAVSNVSIAIYTRLAQLFLM HHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHH WFVSAEALGIYSVAITLATAWMFVTDAVITSFFAKIFAYQRDDAMRTAAKLNGLVLAIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AIVAGIFLLGKPVIVLLYGEQYLAAFPAMGVLAVATLLSALGTLAYKYIVIFSGYGFLSK HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHH KMFLVFIINIPLSYCLIRQYGMMGAAYSTLLTELLSLTLLNYFFRRGTVLQMHLRSLNPL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH TYIRRPVSRING HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA