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The map label for this gene is perR [H]

Identifier: 157369588

GI number: 157369588

Start: 1475510

End: 1476412

Strand: Reverse

Name: perR [H]

Synonym: Spro_1345

Alternate gene names: 157369588

Gene position: 1476412-1475510 (Counterclockwise)

Preceding gene: 157369590

Following gene: 157369586

Centisome position: 27.1

GC content: 62.57

Gene sequence:

>903_bases
ATGAGCCCAACTTCCCGTCCCCGGCTGCCCAAACTGAACGCCATTCTGGCGTTTGAAACCGCCGCCCGCACCGGCAGCCT
GGCCAAAGCGGCAGACCACCTGGCATTGACCGCCGCCGCCGTCAGCCAACAGATCCGCCAGCTTGAGCAGCAGCTGGGTA
TTGTGCTGTTTATCCGCGCTAAAAGCGGCGTGACGCTGACCGAGCAGGGAGCGGACTACCTGGCCTACGTGCAACAGGCC
TTCGAAACCTTGCGCGTGGCACAACAGCATGTCGATCGCCAGCGGGGCAAGGAAACGCTGACGGTATTCGCCTTGCCGGC
ATTGGCGTCAAAATGGCTGAATCCGGCGATCGGCGATTGGCTGGCCCGGCATCCACAGGTGGATATCCGCCTGCACGCCA
CCCATGCCGAAGTCGATTTCGCCGGGTCAGCGGCGGACTTTGCCCTGTGTTTTGGCGATCAGGACTACCCGCTGTTGGAA
AAAGTGCGGCTGTTTCAGGACTGCGTGCAGCCGGTTTGCAGCCCGCAATTGCAGGCTGGCGGCGACTGGACCCAACGGCC
GCTGATCCATGTAGATTGGGGCAAGGAAAGTCAGTTCCTGCCGGGCTGGCATGACTGGTTCAGCGCCGCCGGGTTGCCGC
CGCCACAGCGGCGTGGCCTGACCTATAACCTGACCTCACTGGCGATTGACGCCGCGGTCGAGGGCCACGGCATTTTGCTC
GGCCAGAAGCGGTTGATCCAGCGCGAACTGGCCAGGGGGACGCTGGTGCCGCTGGCAGAACCGGCACTGCCGCTCAGCAA
GCCCTACTACCTGGTTTATCCGCAACGCACGCTGGACAAACCCAAAGCGGCGGAGTTTCTCAGATGGTTGCAAAGCATTG
CGCCAGTAGACAGTGACCGCTAA

Upstream 100 bases:

>100_bases
TAGGCATAGCGGCCGGATAACCCACTGTAGCGAATGCCGGATTGCCGTAATAACAAAAATACGTTAAGGATGAGCTAACC
ATTTCTTAGCGATAAGCGCC

Downstream 100 bases:

>100_bases
AGGCTGCAGCAGCCACTACCCGGCTTTGGACATCATCTCGCCCAGCAACAGGTTGGTCGCACGCGGCAGGTAAACCTCGT
TGCCCGCACCGGGGGTCAGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Peroxide resistance protein perR [H]

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSPTSRPRLPKLNAILAFETAARTGSLAKAADHLALTAAAVSQQIRQLEQQLGIVLFIRAKSGVTLTEQGADYLAYVQQA
FETLRVAQQHVDRQRGKETLTVFALPALASKWLNPAIGDWLARHPQVDIRLHATHAEVDFAGSAADFALCFGDQDYPLLE
KVRLFQDCVQPVCSPQLQAGGDWTQRPLIHVDWGKESQFLPGWHDWFSAAGLPPPQRRGLTYNLTSLAIDAAVEGHGILL
GQKRLIQRELARGTLVPLAEPALPLSKPYYLVYPQRTLDKPKAAEFLRWLQSIAPVDSDR

Sequences:

>Translated_300_residues
MSPTSRPRLPKLNAILAFETAARTGSLAKAADHLALTAAAVSQQIRQLEQQLGIVLFIRAKSGVTLTEQGADYLAYVQQA
FETLRVAQQHVDRQRGKETLTVFALPALASKWLNPAIGDWLARHPQVDIRLHATHAEVDFAGSAADFALCFGDQDYPLLE
KVRLFQDCVQPVCSPQLQAGGDWTQRPLIHVDWGKESQFLPGWHDWFSAAGLPPPQRRGLTYNLTSLAIDAAVEGHGILL
GQKRLIQRELARGTLVPLAEPALPLSKPYYLVYPQRTLDKPKAAEFLRWLQSIAPVDSDR
>Mature_299_residues
SPTSRPRLPKLNAILAFETAARTGSLAKAADHLALTAAAVSQQIRQLEQQLGIVLFIRAKSGVTLTEQGADYLAYVQQAF
ETLRVAQQHVDRQRGKETLTVFALPALASKWLNPAIGDWLARHPQVDIRLHATHAEVDFAGSAADFALCFGDQDYPLLEK
VRLFQDCVQPVCSPQLQAGGDWTQRPLIHVDWGKESQFLPGWHDWFSAAGLPPPQRRGLTYNLTSLAIDAAVEGHGILLG
QKRLIQRELARGTLVPLAEPALPLSKPYYLVYPQRTLDKPKAAEFLRWLQSIAPVDSDR

Specific function: Apparent regulatory gene involved in peroxide resistance in stationary phase [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786448, Length=287, Percent_Identity=34.1463414634146, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1788706, Length=292, Percent_Identity=31.5068493150685, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI1789173, Length=301, Percent_Identity=30.2325581395349, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1786401, Length=267, Percent_Identity=26.2172284644195, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787601, Length=123, Percent_Identity=34.1463414634146, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI157672245, Length=166, Percent_Identity=29.5180722891566, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33221; Mature: 33090

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTSRPRLPKLNAILAFETAARTGSLAKAADHLALTAAAVSQQIRQLEQQLGIVLFIRA
CCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
KSGVTLTEQGADYLAYVQQAFETLRVAQQHVDRQRGKETLTVFALPALASKWLNPAIGDW
CCCCEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCHHHHHH
LARHPQVDIRLHATHAEVDFAGSAADFALCFGDQDYPLLEKVRLFQDCVQPVCSPQLQAG
HHHCCCEEEEEEEEECCEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
GDWTQRPLIHVDWGKESQFLPGWHDWFSAAGLPPPQRRGLTYNLTSLAIDAAVEGHGILL
CCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCHHHCCCEEEHHHHHHHHEECCCEEEE
GQKRLIQRELARGTLVPLAEPALPLSKPYYLVYPQRTLDKPKAAEFLRWLQSIAPVDSDR
CHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SPTSRPRLPKLNAILAFETAARTGSLAKAADHLALTAAAVSQQIRQLEQQLGIVLFIRA
CCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
KSGVTLTEQGADYLAYVQQAFETLRVAQQHVDRQRGKETLTVFALPALASKWLNPAIGDW
CCCCEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCHHHHHH
LARHPQVDIRLHATHAEVDFAGSAADFALCFGDQDYPLLEKVRLFQDCVQPVCSPQLQAG
HHHCCCEEEEEEEEECCEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
GDWTQRPLIHVDWGKESQFLPGWHDWFSAAGLPPPQRRGLTYNLTSLAIDAAVEGHGILL
CCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCHHHCCCEEEHHHHHHHHEECCCEEEE
GQKRLIQRELARGTLVPLAEPALPLSKPYYLVYPQRTLDKPKAAEFLRWLQSIAPVDSDR
CHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]