| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369541
Identifier: 157369541
GI number: 157369541
Start: 1428866
End: 1429867
Strand: Direct
Name: 157369541
Synonym: Spro_1298
Alternate gene names: NA
Gene position: 1428866-1429867 (Clockwise)
Preceding gene: 157369540
Following gene: 157369542
Centisome position: 26.22
GC content: 57.29
Gene sequence:
>1002_bases ATGCAGCCGATAATTCACCTGCTGCTGGTACTGGGGCTGCTGTTTAGTGCGCTGGTGCAGGCCGGGGCTGTTGTGTTCAA CAACTGTGGCCAACAACACCATTACCCGGCGGTACCGAAACGTATACTGGTGTACGCCAACCCCGCGCTGGAAAACCTGC TGGCTCTGGGGTTGGCTCAGCGCATTGTCGGGGTTATCGGCTATGACTATGCGCGGGATACGGCTCCTTCACCGACGCCA GCGGGATGGGGCAAGGTACTGAGCCAACTGTCGGCCACTGCGCCACCGTCGGCGGAGCCCTTGCTGTTGTTGAACCCGGA TTTTATCTATTCGGCTAGCTATTACTGGTTCAACAGCCCGGAAACGCCCAGCCGCGATCGGTTGGCAGAGTGGGGGATCG CCACCTATCTCTCGCCTAATGTCTGCGGAGGTCAGCAAAGTGCTGCAAGCTCATCGGCCAGTTTTAACGGCATTTTTGCC GAACTGCGGGATATCGCCCGCATTTTTAATGTTTCCCGCGATGCCGAAACCTTAATTCAGCAGCTGCAAATTCAACTGCG CGATCTGGGGCAGCAGGCGGCATCGCTCCCTCATCGACGAATACTCTGGTGGTATGCCGACACTCAAACCCCTTATGTGG CGGGATGTTGCGGCGCACCGGCATTGCTGACCAAGCAGGTGGGCAGCGAAAACCTGTTTGGCGACCTGCCCGAGCTTTGG CCCACCGTTTCCTGGGAAACCATTGCTGCCCGCGATCCCGACCTGATTGTGCTTGGCGATTTGCCTCGTGGCGGGCTCGG CGATAGCGCAAAAGACAAAATCCATTTTTTAGAGCATCACCCACTGACCGCCACCCTGCGTGCCGTGCGGCAAAAAAACT ATGTGATTTTGCCCGGCTATGACCTGGATCCCTCAGCCCGCACGGTTGCGTCCTTGCACCGTTTAATAACGGGTCTGCAG CAGCAGGCTTTACGTTTACCCACTCCCAATAAGGAACCCTGA
Upstream 100 bases:
>100_bases AATCAACTCTATGCTTACCAGCGGACCTACCCGGATCAGGTGCTGATTGCGCCGTCGCGGACTTATGAAAGCTTTATTTC GGTGAGGTTCTGATAGCGCC
Downstream 100 bases:
>100_bases TATGTCCTCGTTATCATTCTCTTCACTGCTGACCTCGTGGGATCAACAACAGGGCGCTTACATCGCCGAGCGAGAGGCGC GTTTCAATGCCCAGCTCGAC
Product: periplasmic binding protein
Products: NA
Alternate protein names: Iron Transport Lipoprotein; Iron ABC Transporter; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MQPIIHLLLVLGLLFSALVQAGAVVFNNCGQQHHYPAVPKRILVYANPALENLLALGLAQRIVGVIGYDYARDTAPSPTP AGWGKVLSQLSATAPPSAEPLLLLNPDFIYSASYYWFNSPETPSRDRLAEWGIATYLSPNVCGGQQSAASSSASFNGIFA ELRDIARIFNVSRDAETLIQQLQIQLRDLGQQAASLPHRRILWWYADTQTPYVAGCCGAPALLTKQVGSENLFGDLPELW PTVSWETIAARDPDLIVLGDLPRGGLGDSAKDKIHFLEHHPLTATLRAVRQKNYVILPGYDLDPSARTVASLHRLITGLQ QQALRLPTPNKEP
Sequences:
>Translated_333_residues MQPIIHLLLVLGLLFSALVQAGAVVFNNCGQQHHYPAVPKRILVYANPALENLLALGLAQRIVGVIGYDYARDTAPSPTP AGWGKVLSQLSATAPPSAEPLLLLNPDFIYSASYYWFNSPETPSRDRLAEWGIATYLSPNVCGGQQSAASSSASFNGIFA ELRDIARIFNVSRDAETLIQQLQIQLRDLGQQAASLPHRRILWWYADTQTPYVAGCCGAPALLTKQVGSENLFGDLPELW PTVSWETIAARDPDLIVLGDLPRGGLGDSAKDKIHFLEHHPLTATLRAVRQKNYVILPGYDLDPSARTVASLHRLITGLQ QQALRLPTPNKEP >Mature_333_residues MQPIIHLLLVLGLLFSALVQAGAVVFNNCGQQHHYPAVPKRILVYANPALENLLALGLAQRIVGVIGYDYARDTAPSPTP AGWGKVLSQLSATAPPSAEPLLLLNPDFIYSASYYWFNSPETPSRDRLAEWGIATYLSPNVCGGQQSAASSSASFNGIFA ELRDIARIFNVSRDAETLIQQLQIQLRDLGQQAASLPHRRILWWYADTQTPYVAGCCGAPALLTKQVGSENLFGDLPELW PTVSWETIAARDPDLIVLGDLPRGGLGDSAKDKIHFLEHHPLTATLRAVRQKNYVILPGYDLDPSARTVASLHRLITGLQ QQALRLPTPNKEP
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36385; Mature: 36385
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPIIHLLLVLGLLFSALVQAGAVVFNNCGQQHHYPAVPKRILVYANPALENLLALGLAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHH RIVGVIGYDYARDTAPSPTPAGWGKVLSQLSATAPPSAEPLLLLNPDFIYSASYYWFNSP HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEEEECCC ETPSRDRLAEWGIATYLSPNVCGGQQSAASSSASFNGIFAELRDIARIFNVSRDAETLIQ CCCCHHHHHHHCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH QLQIQLRDLGQQAASLPHRRILWWYADTQTPYVAGCCGAPALLTKQVGSENLFGDLPELW HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHC PTVSWETIAARDPDLIVLGDLPRGGLGDSAKDKIHFLEHHPLTATLRAVRQKNYVILPGY CCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEEECCC DLDPSARTVASLHRLITGLQQQALRLPTPNKEP CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQPIIHLLLVLGLLFSALVQAGAVVFNNCGQQHHYPAVPKRILVYANPALENLLALGLAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHH RIVGVIGYDYARDTAPSPTPAGWGKVLSQLSATAPPSAEPLLLLNPDFIYSASYYWFNSP HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEEEECCC ETPSRDRLAEWGIATYLSPNVCGGQQSAASSSASFNGIFAELRDIARIFNVSRDAETLIQ CCCCHHHHHHHCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH QLQIQLRDLGQQAASLPHRRILWWYADTQTPYVAGCCGAPALLTKQVGSENLFGDLPELW HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHC PTVSWETIAARDPDLIVLGDLPRGGLGDSAKDKIHFLEHHPLTATLRAVRQKNYVILPGY CCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEEECCC DLDPSARTVASLHRLITGLQQQALRLPTPNKEP CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA