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The map label for this gene is ybgF [H]

Identifier: 157369524

GI number: 157369524

Start: 1407562

End: 1408362

Strand: Direct

Name: ybgF [H]

Synonym: Spro_1281

Alternate gene names: 157369524

Gene position: 1407562-1408362 (Clockwise)

Preceding gene: 157369523

Following gene: 157369525

Centisome position: 25.83

GC content: 53.43

Gene sequence:

>801_bases
ATGAACAGTAACTTCAGACGTCACTTGTTGAGTCTGTCGTTACTGGTTGGCGTAGCGGTCCCATGGGCCGCTACTGCCCA
AGCGCCAATCAGTAATGTCGGCTCCGGCTCGGTCGAAGACCGTGTCACCTCACTTGAGCGCATCAGCAATGCTCAGGGCC
AGCTTTTAAACCAACTCCAGCAACAACTCTCTGACAACCAGCGCGATATTGACTCTCTCCGCGGGCAAATCCAGGAAAAC
CAATATCAACTGAATCAGGTTGTTGAACGCCAAAAGCAGATCTATCAACAGATGGATAGCATCAGCCAGGGCGGCGCTCA
GAGCTCCGCTGCTGCAGCGGGTGCCGCAGGTGGGGCAGCAGCGGCTGCGTCCACTGACGGCGCTGAGAGCGCCTCTGCGG
GCGCTACAGCCGCAGCGCCGGCCAGTACGGGTGATGAAAACAGCGACTACAACGCCGCTGTTTCATTGGCGCTGGAAAAA
AAGCAGTATGACCAGGCTATTTCCGCTTTTCAGTCCTTCGTAAAACAGTACCCAAAATCAACTTACCAGCCCAACGCCAA
CTATTGGCTCGGCCAGTTGTTCTACAACAAGGGTAAGAAAGATGATGCGGCTTACTATTATGCGGTGGTGGTGAAGAATT
ACGCAAAATCACCTAAGGCACCGGACGCAATGTACAAGGTAGGTATCATCATGCAGGAAAAAGGGCAGGCCGATAAAGCC
AAAGCCGTGTTCCAGCAGGTGATTAAACAATACCCAACCAGTGCTGCGGCCAAACAGGCGAAAAGTCGAGTAGCAGGTTA
G

Upstream 100 bases:

>100_bases
TATCGTTTCTTACGGTAAAGAAAAACCAGCAGTACTGGGCCACGACGAAGCGGCTTATGCTAAAAACCGTCGTGCAGTTC
TGGTTTACTAAGAGAATCGC

Downstream 100 bases:

>100_bases
TCAGTAAAAAAATGAGCCCAGAAGTTAGTCGATTTGACCGATTTCTGGGCTCATTCGTGTGAAGAACAAGCAGTTGAACC
TGTTGTTTATAAATTTAGGT

Product: tol-pal system protein YbgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MNSNFRRHLLSLSLLVGVAVPWAATAQAPISNVGSGSVEDRVTSLERISNAQGQLLNQLQQQLSDNQRDIDSLRGQIQEN
QYQLNQVVERQKQIYQQMDSISQGGAQSSAAAAGAAGGAAAAASTDGAESASAGATAAAPASTGDENSDYNAAVSLALEK
KQYDQAISAFQSFVKQYPKSTYQPNANYWLGQLFYNKGKKDDAAYYYAVVVKNYAKSPKAPDAMYKVGIIMQEKGQADKA
KAVFQQVIKQYPTSAAAKQAKSRVAG

Sequences:

>Translated_266_residues
MNSNFRRHLLSLSLLVGVAVPWAATAQAPISNVGSGSVEDRVTSLERISNAQGQLLNQLQQQLSDNQRDIDSLRGQIQEN
QYQLNQVVERQKQIYQQMDSISQGGAQSSAAAAGAAGGAAAAASTDGAESASAGATAAAPASTGDENSDYNAAVSLALEK
KQYDQAISAFQSFVKQYPKSTYQPNANYWLGQLFYNKGKKDDAAYYYAVVVKNYAKSPKAPDAMYKVGIIMQEKGQADKA
KAVFQQVIKQYPTSAAAKQAKSRVAG
>Mature_266_residues
MNSNFRRHLLSLSLLVGVAVPWAATAQAPISNVGSGSVEDRVTSLERISNAQGQLLNQLQQQLSDNQRDIDSLRGQIQEN
QYQLNQVVERQKQIYQQMDSISQGGAQSSAAAAGAAGGAAAAASTDGAESASAGATAAAPASTGDENSDYNAAVSLALEK
KQYDQAISAFQSFVKQYPKSTYQPNANYWLGQLFYNKGKKDDAAYYYAVVVKNYAKSPKAPDAMYKVGIIMQEKGQADKA
KAVFQQVIKQYPTSAAAKQAKSRVAG

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786963, Length=264, Percent_Identity=68.1818181818182, Blast_Score=320, Evalue=7e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28401; Mature: 28401

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1574003; 8905232; 9278503; 7567469 [H]