| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is nadA
Identifier: 157369525
GI number: 157369525
Start: 1409507
End: 1410568
Strand: Direct
Name: nadA
Synonym: Spro_1282
Alternate gene names: 157369525
Gene position: 1409507-1410568 (Clockwise)
Preceding gene: 157369524
Following gene: 157369526
Centisome position: 25.87
GC content: 58.0
Gene sequence:
>1062_bases ATGAGTGAAATGTTTGATGTTAATGCGGCGGTGTACCCGTTCCCGCCCAAGCCGGTACCGCTGGACGACGCGCAGAAGGC GTTTTACCGCGAGAAGATTAAAATCCTGCTCAAGCAGCGTAATGCGGTGATGGTAGCCCATTACTATACCGATCCGGAGA TCCAGGCGCTGGCGGAAGAAACCGGTGGCTGCGTGGCGGACTCGCTGGAGATGGCGCGCTTTGGCAGCAATCATCCGGCT TCGACCCTGCTGGTTGCCGGGGTGCGTTTTATGGGGGAAACCGCCAAGATCCTCAGCCCCGAAAAACGGGTGCTGATGCC GACGCTGAACGCGGAGTGCTCGCTGGATCTCGGTTGCCCGGAAGAAGAATTCAATGCCTTTTGCGACAGCCACCCGGACA GAACCGTGGTGGTCTACGCTAATACCTCAGCGGCGGTAAAAGCTCGGGCGGACTGGGTGGTCACCTCCAGTATCGCCGTT GAACTGATTGAACATCTCGACAGCCTGGGTGAGAAAATCATCTGGGCGCCGGATCGCCATCTGGGGAGCTATGTGCAAAA GCAAACCGGTGCAGATATGCTGTGCTGGCAGGGGGCCTGTATCGTCCATGACGAGTTTAAAACCCAGGCCCTGATGCGGA TGAAGGCCTTGTACCCGAACGCGGCGATACTGGTGCATCCGGAGTCACCACAGGCGGTGGTCAGCCTGGCCGATGCGGTA GGCTCAACCAGCCAATTGATTCAGGCGGCGAAAACCCTGCCTAATTCGCAGCTGATTGTTGCCACCGATCGCGGTATTTT TTATAAGATGCAACAGGCCTGCCCGGACAAAGAGTTGTTCGAAGCGCCAACCGCCGGGGAAGGTGCCACCTGTCGCAGCT GCGCACACTGCCCGTGGATGGCGATGAATGGCCTGAAGGCTATCGCCGATGGGCTGGAGCACGGTGGTGTACTGCATGAG ATCCATGTCGATGCCGCGTTGCGTCAGAAGGCGCTGATCCCGCTGAACCGGATGTTGGATTTCGCCGCTGAGTTAAGGGT GCAGGTTAAAGGGAACGCTTAA
Upstream 100 bases:
>100_bases GCACAAATAAAGGTATTTTGTTTAGTATATAAAACGAAGGGGGTTGCGATGGGGTGATACCCGGGCAGCAGACACCCAGC CTAGCACAGAGATTGCAGCG
Downstream 100 bases:
>100_bases CCATTTAATAAGGAAGATAAAATGAGCTTTTTCAGTACCAGCAATATCCTGGTGCATATCCCGCTGGGAGCGGGGGGCTA CGATCTGTCATGGATTGAGG
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSEMFDVNAAVYPFPPKPVPLDDAQKAFYREKIKILLKQRNAVMVAHYYTDPEIQALAEETGGCVADSLEMARFGSNHPA STLLVAGVRFMGETAKILSPEKRVLMPTLNAECSLDLGCPEEEFNAFCDSHPDRTVVVYANTSAAVKARADWVVTSSIAV ELIEHLDSLGEKIIWAPDRHLGSYVQKQTGADMLCWQGACIVHDEFKTQALMRMKALYPNAAILVHPESPQAVVSLADAV GSTSQLIQAAKTLPNSQLIVATDRGIFYKMQQACPDKELFEAPTAGEGATCRSCAHCPWMAMNGLKAIADGLEHGGVLHE IHVDAALRQKALIPLNRMLDFAAELRVQVKGNA
Sequences:
>Translated_353_residues MSEMFDVNAAVYPFPPKPVPLDDAQKAFYREKIKILLKQRNAVMVAHYYTDPEIQALAEETGGCVADSLEMARFGSNHPA STLLVAGVRFMGETAKILSPEKRVLMPTLNAECSLDLGCPEEEFNAFCDSHPDRTVVVYANTSAAVKARADWVVTSSIAV ELIEHLDSLGEKIIWAPDRHLGSYVQKQTGADMLCWQGACIVHDEFKTQALMRMKALYPNAAILVHPESPQAVVSLADAV GSTSQLIQAAKTLPNSQLIVATDRGIFYKMQQACPDKELFEAPTAGEGATCRSCAHCPWMAMNGLKAIADGLEHGGVLHE IHVDAALRQKALIPLNRMLDFAAELRVQVKGNA >Mature_352_residues SEMFDVNAAVYPFPPKPVPLDDAQKAFYREKIKILLKQRNAVMVAHYYTDPEIQALAEETGGCVADSLEMARFGSNHPAS TLLVAGVRFMGETAKILSPEKRVLMPTLNAECSLDLGCPEEEFNAFCDSHPDRTVVVYANTSAAVKARADWVVTSSIAVE LIEHLDSLGEKIIWAPDRHLGSYVQKQTGADMLCWQGACIVHDEFKTQALMRMKALYPNAAILVHPESPQAVVSLADAVG STSQLIQAAKTLPNSQLIVATDRGIFYKMQQACPDKELFEAPTAGEGATCRSCAHCPWMAMNGLKAIADGLEHGGVLHEI HVDAALRQKALIPLNRMLDFAAELRVQVKGNA
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1786964, Length=346, Percent_Identity=83.5260115606936, Blast_Score=615, Evalue=1e-177,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NADA_SERP5 (A8GB96)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001477514.1 - STRING: A8GB96 - GeneID: 5605367 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_1282 - eggNOG: COG0379 - HOGENOM: HBG291157 - OMA: IAHPECE - ProtClustDB: PRK09375 - BioCyc: SPRO399741:SPRO_1282-MONOMER - GO: GO:0005737 - HAMAP: MF_00567 - InterPro: IPR003473 - TIGRFAMs: TIGR00550
Pfam domain/function: PF02445 NadA
EC number: =2.5.1.72
Molecular weight: Translated: 38504; Mature: 38372
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: BINDING 47-47 BINDING 68-68 BINDING 139-139 BINDING 156-156 BINDING 226-226 BINDING 243-243
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMFDVNAAVYPFPPKPVPLDDAQKAFYREKIKILLKQRNAVMVAHYYTDPEIQALAEE CCCCEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHH TGGCVADSLEMARFGSNHPASTLLVAGVRFMGETAKILSPEKRVLMPTLNAECSLDLGCP HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCEEEECCCC EEEFNAFCDSHPDRTVVVYANTSAAVKARADWVVTSSIAVELIEHLDSLGEKIIWAPDRH HHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEHHHHHHHHHHHHHHHCCEEEECCCHH LGSYVQKQTGADMLCWQGACIVHDEFKTQALMRMKALYPNAAILVHPESPQAVVSLADAV HHHHHHHHCCCCEEEECCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH GSTSQLIQAAKTLPNSQLIVATDRGIFYKMQQACPDKELFEAPTAGEGATCRSCAHCPWM CCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHCCCCHH AMNGLKAIADGLEHGGVLHEIHVDAALRQKALIPLNRMLDFAAELRVQVKGNA HHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHEEEEEECCC >Mature Secondary Structure SEMFDVNAAVYPFPPKPVPLDDAQKAFYREKIKILLKQRNAVMVAHYYTDPEIQALAEE CCCEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHH TGGCVADSLEMARFGSNHPASTLLVAGVRFMGETAKILSPEKRVLMPTLNAECSLDLGCP HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCEEEECCCC EEEFNAFCDSHPDRTVVVYANTSAAVKARADWVVTSSIAVELIEHLDSLGEKIIWAPDRH HHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEHHHHHHHHHHHHHHHCCEEEECCCHH LGSYVQKQTGADMLCWQGACIVHDEFKTQALMRMKALYPNAAILVHPESPQAVVSLADAV HHHHHHHHCCCCEEEECCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH GSTSQLIQAAKTLPNSQLIVATDRGIFYKMQQACPDKELFEAPTAGEGATCRSCAHCPWM CCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHCCCCHH AMNGLKAIADGLEHGGVLHEIHVDAALRQKALIPLNRMLDFAAELRVQVKGNA HHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA