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The map label for this gene is ybgJ [H]

Identifier: 157369498

GI number: 157369498

Start: 1381204

End: 1381860

Strand: Direct

Name: ybgJ [H]

Synonym: Spro_1255

Alternate gene names: 157369498

Gene position: 1381204-1381860 (Clockwise)

Preceding gene: 157369497

Following gene: 157369499

Centisome position: 25.35

GC content: 60.12

Gene sequence:

>657_bases
GTGCAACGAGCACGATGTTACCTATTAGGTGAAAGAGCGGTAGTGCTTGAGCTGTCGCCACCGGTGACGCTGCCGAGCCA
GCAGCGGATTTGGGCGCTGGCCGAAAAACTGAATCATCATCCCGATGTGCGTGAAGTGATACCGGGCATGAACAATCTTA
CGTTGCTGCTGCATACGCCGCAGGCCGACGCAGAACAAATGCTGACGCTGTTGCAACAGGGCTGGGACAGCAAGGAAATC
CTGGTGCCTGAATCGCGCCAGGTGGATATTCCGGTGATCTACGGGGGTCAGGACGGTCCCGACCTGGATGAAGTGGCACG
CCACACCGGCATGACGCCGCAGCAGGTTGTGGAATGCCACTCCTCGGCGGCCTACGTGGTCTATTTCCTCGGTTTTCAGC
CCGGTTTTTCTTACATGGGCGGCATGCCGGAAAAGTTGGCGACGCCGCGCCGCGCTGAACCGCGCTTGTCGGTGGCGGCA
GGCTCCGTTGGCATCGGCGGCAGCCAGACCGGGATTTATCCGCTGGTCACCCCCGGTGGCTGGCAGTTGATTGGCCGTAC
TCCTTTGGCGCTGTTTAATCCCTATGAAATGCCGCCAACCTTGCTGCGCCCCGGTGATAGCGTGCGGTTTGTGCCGCAGA
AGGAGGGCGTATGCTGA

Upstream 100 bases:

>100_bases
GCCTAATCCCTTATTTTCTCAAAGGTTGTTCTATTGACAGCCAGAGCGTCGTCGCGCATAACTGTTGTGTTTTCATCGCG
ATAATAATAAGGAGAAAAGG

Downstream 100 bases:

>100_bases
AGATCCTGCGTGCGGGCATTTACACTACGGTGCAGGATCTGGGCCGTAACGGTTTCCGTCGTCTGGGCGTTAGTCAGAGT
GGGGCGCTTGACGAACCTGC

Product: allophanate hydrolase subunit 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MQRARCYLLGERAVVLELSPPVTLPSQQRIWALAEKLNHHPDVREVIPGMNNLTLLLHTPQADAEQMLTLLQQGWDSKEI
LVPESRQVDIPVIYGGQDGPDLDEVARHTGMTPQQVVECHSSAAYVVYFLGFQPGFSYMGGMPEKLATPRRAEPRLSVAA
GSVGIGGSQTGIYPLVTPGGWQLIGRTPLALFNPYEMPPTLLRPGDSVRFVPQKEGVC

Sequences:

>Translated_218_residues
MQRARCYLLGERAVVLELSPPVTLPSQQRIWALAEKLNHHPDVREVIPGMNNLTLLLHTPQADAEQMLTLLQQGWDSKEI
LVPESRQVDIPVIYGGQDGPDLDEVARHTGMTPQQVVECHSSAAYVVYFLGFQPGFSYMGGMPEKLATPRRAEPRLSVAA
GSVGIGGSQTGIYPLVTPGGWQLIGRTPLALFNPYEMPPTLLRPGDSVRFVPQKEGVC
>Mature_218_residues
MQRARCYLLGERAVVLELSPPVTLPSQQRIWALAEKLNHHPDVREVIPGMNNLTLLLHTPQADAEQMLTLLQQGWDSKEI
LVPESRQVDIPVIYGGQDGPDLDEVARHTGMTPQQVVECHSSAAYVVYFLGFQPGFSYMGGMPEKLATPRRAEPRLSVAA
GSVGIGGSQTGIYPLVTPGGWQLIGRTPLALFNPYEMPPTLLRPGDSVRFVPQKEGVC

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=218, Percent_Identity=66.5137614678899, Blast_Score=296, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 23907; Mature: 23907

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRARCYLLGERAVVLELSPPVTLPSQQRIWALAEKLNHHPDVREVIPGMNNLTLLLHTP
CCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECC
QADAEQMLTLLQQGWDSKEILVPESRQVDIPVIYGGQDGPDLDEVARHTGMTPQQVVECH
CCCHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHC
SSAAYVVYFLGFQPGFSYMGGMPEKLATPRRAEPRLSVAAGSVGIGGSQTGIYPLVTPGG
CCCEEEEEEEECCCCHHHHCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCC
WQLIGRTPLALFNPYEMPPTLLRPGDSVRFVPQKEGVC
EEEECCCCCEEECCCCCCHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MQRARCYLLGERAVVLELSPPVTLPSQQRIWALAEKLNHHPDVREVIPGMNNLTLLLHTP
CCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECC
QADAEQMLTLLQQGWDSKEILVPESRQVDIPVIYGGQDGPDLDEVARHTGMTPQQVVECH
CCCHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHC
SSAAYVVYFLGFQPGFSYMGGMPEKLATPRRAEPRLSVAAGSVGIGGSQTGIYPLVTPGG
CCCEEEEEEEECCCCHHHHCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCC
WQLIGRTPLALFNPYEMPPTLLRPGDSVRFVPQKEGVC
EEEECCCCCEEECCCCCCHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]