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The map label for this gene is ybgI [C]

Identifier: 157369497

GI number: 157369497

Start: 1380309

End: 1381052

Strand: Direct

Name: ybgI [C]

Synonym: Spro_1254

Alternate gene names: 157369497

Gene position: 1380309-1381052 (Clockwise)

Preceding gene: 157369496

Following gene: 157369498

Centisome position: 25.33

GC content: 59.41

Gene sequence:

>744_bases
ATGCGTAACCTCGATCTGGAACAGTTGATCAACACAGAACTGAACACCGCCGCGTTTCAGGATTACGGGCCGAATGGCCT
GCAGGTGGAAGGGCGAGCGCACGTGCAGCGTATCGTCACCGGCGTGACCGCCTGCCAGGCACTGCTGGATGCGGCAGTGG
CACATCAGGCGGACGCCATTGTGGTGCATCACGGCTATTTCTGGAAAAACGAAGCGCCCTCGGTGCGTGGTATGAAGCGC
AATCGGCTGAAAACGCTGCTGAGTAATGATATCAACCTGTACGCTTATCATCTGCCGCTGGACGCGCATCCGGTGCTGGG
TAACAACGCGCAGTTGGCACATTTGCTCGGGATCCGGGTGATTGGCGAAGTGGAGCCGCTGGTGCCGCACGGCGAATTCG
AGCAGCCATTGACCGGTATTGAACTGCAACAGCGCATCGAGAGCCGTCTGGGCCGTGCCGTGTTGCACTGCGGCGATAAC
GCACCGGCGCATATCCGCCGTGTAGCCTGGTGCACCGGCGGCGGTCAGGGCTTTATCGACAGCGCCGCACGCTTTGGCGT
TGATGCCTTTATCAGCGGTGAAGTTTCTGAGCAAACCATCCACAGCGCGCGCGAAATGGGTATTCACTTCTTTGCCGCCG
GGCACCATGCCACTGAGCGCGGTGGCGTTAAGGCGCTCGGTGAATGGCTGACCCAACAGCATGGCTTTGACGTGACCTTT
ATTGACATCCCCAATCCCGCCTGA

Upstream 100 bases:

>100_bases
CCATCAAACAGCAGTTGGAACAGGGTAACAGCCTGGGCGTAAAATATATCCTGATGGAACAGGGCGACCGGCAGACATTT
TGAATTAAAGAGAGAACTCT

Downstream 100 bases:

>100_bases
TTATCCCCCAGGATCCAGCCCGGTTTTTACCGTGGCTGAATCCTTTTAATAGCCTAATCCCTTATTTTCTCAAAGGTTGT
TCTATTGACAGCCAGAGCGT

Product: putative hydrolase-oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRNLDLEQLINTELNTAAFQDYGPNGLQVEGRAHVQRIVTGVTACQALLDAAVAHQADAIVVHHGYFWKNEAPSVRGMKR
NRLKTLLSNDINLYAYHLPLDAHPVLGNNAQLAHLLGIRVIGEVEPLVPHGEFEQPLTGIELQQRIESRLGRAVLHCGDN
APAHIRRVAWCTGGGQGFIDSAARFGVDAFISGEVSEQTIHSAREMGIHFFAAGHHATERGGVKALGEWLTQQHGFDVTF
IDIPNPA

Sequences:

>Translated_247_residues
MRNLDLEQLINTELNTAAFQDYGPNGLQVEGRAHVQRIVTGVTACQALLDAAVAHQADAIVVHHGYFWKNEAPSVRGMKR
NRLKTLLSNDINLYAYHLPLDAHPVLGNNAQLAHLLGIRVIGEVEPLVPHGEFEQPLTGIELQQRIESRLGRAVLHCGDN
APAHIRRVAWCTGGGQGFIDSAARFGVDAFISGEVSEQTIHSAREMGIHFFAAGHHATERGGVKALGEWLTQQHGFDVTF
IDIPNPA
>Mature_247_residues
MRNLDLEQLINTELNTAAFQDYGPNGLQVEGRAHVQRIVTGVTACQALLDAAVAHQADAIVVHHGYFWKNEAPSVRGMKR
NRLKTLLSNDINLYAYHLPLDAHPVLGNNAQLAHLLGIRVIGEVEPLVPHGEFEQPLTGIELQQRIESRLGRAVLHCGDN
APAHIRRVAWCTGGGQGFIDSAARFGVDAFISGEVSEQTIHSAREMGIHFFAAGHHATERGGVKALGEWLTQQHGFDVTF
IDIPNPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=247, Percent_Identity=73.2793522267206, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 26990; Mature: 26990

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLDLEQLINTELNTAAFQDYGPNGLQVEGRAHVQRIVTGVTACQALLDAAVAHQADAI
CCCCCHHHHHCCCCCHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VVHHGYFWKNEAPSVRGMKRNRLKTLLSNDINLYAYHLPLDAHPVLGNNAQLAHLLGIRV
EEECCEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
IGEVEPLVPHGEFEQPLTGIELQQRIESRLGRAVLHCGDNAPAHIRRVAWCTGGGQGFID
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCHHHEEEEEECCCCCCHHH
SAARFGVDAFISGEVSEQTIHSAREMGIHFFAAGHHATERGGVKALGEWLTQQHGFDVTF
HHHHHCCHHEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEE
IDIPNPA
EECCCCC
>Mature Secondary Structure
MRNLDLEQLINTELNTAAFQDYGPNGLQVEGRAHVQRIVTGVTACQALLDAAVAHQADAI
CCCCCHHHHHCCCCCHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VVHHGYFWKNEAPSVRGMKRNRLKTLLSNDINLYAYHLPLDAHPVLGNNAQLAHLLGIRV
EEECCEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
IGEVEPLVPHGEFEQPLTGIELQQRIESRLGRAVLHCGDNAPAHIRRVAWCTGGGQGFID
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCHHHEEEEEECCCCCCHHH
SAARFGVDAFISGEVSEQTIHSAREMGIHFFAAGHHATERGGVKALGEWLTQQHGFDVTF
HHHHHCCHHEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEE
IDIPNPA
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]