| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is atoS [C]
Identifier: 157369271
GI number: 157369271
Start: 1128367
End: 1130979
Strand: Reverse
Name: atoS [C]
Synonym: Spro_1028
Alternate gene names: 157369271
Gene position: 1130979-1128367 (Counterclockwise)
Preceding gene: 157369278
Following gene: 157369270
Centisome position: 20.76
GC content: 61.77
Gene sequence:
>2613_bases ATGCGCAGACTGCCTTTCCTTGCCGGTGCACGTGGGCGCCTGCTGATGTTCAACCTGTTGGTGGTGGCGGTGACGCTGAT GGTCAGCGGCGTGGCGATCGTCGGCTTTAACCATGCGGGCAAGCTGCAGGAACAAGTTCAGGCGCAAACGCTAAATGAGA TGAACGGCAGCATGGCGCTGAGCCGGGATACTTCGAACGTGGCGACCGCCGCCATTCGGCTATCGCAGGTGGTGGGTGCG CTGGAGTATCAGAGCGAGTCAGCCCGGCTGAAGCAAACCCAGCTGGCGCTGCAGGCCTCGCTCAGCCGACTGGCGGACGC TCCGCTGGCACATAGCGAGCCGGAGCTGGTGCAACGCATCATCAGCCGCAGCAACGCGTTGGAAACCAGCGTGACCCGCA TGCTGGATCTCGGTCACGCACGGCATCTGCAACGCAATATCCTGCTCAGTGGGCTGTATCAGGCGCAGAGCACGCTGCGG CATATCGCCAGCCTCAACCAACGTAATAATCAGAACCCGCCCTCGCTGCCGCTGCTGAGCCAGATCGACCGGCTGCTGGC GATCGCCATTCAAACCCCGACGCCCAAGGCCGCCGCCCAGCAACTCGACAGCGTGATGGCCTACTGGCCGCAGCACAGCC CGGATGCCTTGGTCGACGAGAAAATGCGCCAGTTTCGCGACAGCGAACAACGCCTGCTGCCCGAAACGCTGGAGCTGGAG CAAAGCGATCTGGCCCTGGCCTATTACACCTACCATATCAAAGCCTTAGTAGCGATGCTCAATGACGACATCAATCTCTA CGTACAGAAGGTGGCAGACGAGTCGGAGCTGCGCACCCATCAAACCCATCGTGAACTCAGCTCCATCAGCTGGTTTATCG GCCTGTTCGCGCTGCTGGCGCTGGTGATTACCGGCTTCGCCGGGTGGTATATCTACCGTAATCTGGGATCGAACCTGACG GCGATCGCCGGTGCCATGACGCGGCTGGCGCGCGGCGAACGTGAGGTCAGCGTACCGGCACTGCAGCGCCGTGACGAACT GGGCGATTTGGCGCGGGCATTCAACGTCTTTGCTCGCAATACCGCCTCGCTGGAGCAAACTTCTCGCCTGCTGAAAGAGA AAAGCACCCAGCTGGAAACCACCTTTCTGGCAATGCGCGACGGCTTTGCGCTGTTTGATAACGACGGCCAACTGGTGGTA TGGAACCCGCAGTATCCGCTGCTGCTGGGGCTAAACGAACACCAGTTGCACCGGGGCCAACACTACCGTGAACTGCTGCA ACACGTGACGCCCCCGGCGGGTCAGCGCTGGGAAGCGGTGCTGGCCAACCTGTCCAGTGAACTGCCGCAGCCGCAGGAAC TGCGCCTGAGCGACGGCCGCACCGTCGAGCTGCGCTTCAGTCCGGTGCCCAATCGCGGCGTAGTTAACGTGGTATTGGAA CGCACCGAGCGCAAAGCGCTGGAAGAGGCGCTGCTGCACAGCCAGAAAATGAAGGCGGTCGGTCAGCTCACCGGCGGCCT GGCGCATGATTTTAACAATCTGCTGGCGGTGATTATCGGCAGCCTGGAACTGACCACCCAACAGACTCAGGACGCCCAAA CCGAACAGCGTATTGCCCGGGCGCTGAAGGCCGCCGAACGCGGTGCACAGCTCACCCAGCGGCTGCTGGCATTTTCGCGT AAACAGGCGTTGCATCCGCAGGCCATCACGCTACAGACGCTGGTAGAAAACCTGCAGGAATTGCTGCGTCATTCACTGCC CACGACGTTGTCGCTAAGCATTGAGACTCAGCGGCCCGGCTGGCCGGCGTGGGTGGATGCCAATCAGTTGGAAAACGCGC TGATCAACCTGGTAGTCAACGCCCGGGATGCCATGGAAGGCCGCAGCGGCATGGTCAAGATCCGTATCTATAACCAACGA GTGGTGCGCAGCGGTGGCAAGAAACAGGACATGGTGGCGCTGGAGGTGATCGACACCGGCTGCGGCATGTCGGAGGAAGT GAAAGCGCAGGTGTTCGAACCTTTCTTCACCACCAAGGCAGTCGGCAGCGGCAGCGGGCTGGGGCTGTCGATGGTTTACG GCTTTGTTCGCCAGTCCGGCGGCCGGGTGCAGATTGAAACCGCACCCGGCGAAGGCACTCTGGTGCGTCTGCAACTGCCG CGCGCCCCGGCACCGGCAATCGCCCAAGCACCGCCCCTGCCGCTCGAAGAAAGCGACGGCACCGACAGTCTGGTGTTGGT GCTGGAAGATGAAAATGACGTGCGCCATACGCTGTGCGAACACCTGCATCAGCTCGGCTACCTGACGCTGGACTGCGCAG ACAGCCATGAAGCGCTGGCGCTGCTGCGCCAGACGCCGGATATTGGGGTGTTGGTCAGTGACCTGATGCTGCCGGGCGAA CTGGACGGCGTGCAGGTGATTGGGCTGGCGCGAGAGATTAATCCGCGCCTTACCGCGCTGCTGATCAGCGGCCAGGATAT ACGCCGTCACCACGAAGACACACTGCCCAACGTTGAACTGCTGCGCAAGCCTTTCAGCCAGCGGCAACTGGCGTTGGCAC TGCAACGGGCACGCCGCTCAAACGCGGCCGCTGACGCAATTCGGAGGGAATGA
Upstream 100 bases:
>100_bases CACGCATAAATAAATGCAAAATGTCAGCGGCCGTTCATCTTTGTCATATTGTTAATGGGACGGGGATTTATAATGCGGAC AGTCAGTTACGGGGGATCCA
Downstream 100 bases:
>100_bases GGCGATTTTTCGCCCCTGATTCGTTATTATGCCGCCCTGCTTTTGATGAATAAGCGTGCCAGACGCACGCCCAGCCAGGG ATAACATTATGCTGTGGTTT
Product: multi-sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 870; Mature: 870
Protein sequence:
>870_residues MRRLPFLAGARGRLLMFNLLVVAVTLMVSGVAIVGFNHAGKLQEQVQAQTLNEMNGSMALSRDTSNVATAAIRLSQVVGA LEYQSESARLKQTQLALQASLSRLADAPLAHSEPELVQRIISRSNALETSVTRMLDLGHARHLQRNILLSGLYQAQSTLR HIASLNQRNNQNPPSLPLLSQIDRLLAIAIQTPTPKAAAQQLDSVMAYWPQHSPDALVDEKMRQFRDSEQRLLPETLELE QSDLALAYYTYHIKALVAMLNDDINLYVQKVADESELRTHQTHRELSSISWFIGLFALLALVITGFAGWYIYRNLGSNLT AIAGAMTRLARGEREVSVPALQRRDELGDLARAFNVFARNTASLEQTSRLLKEKSTQLETTFLAMRDGFALFDNDGQLVV WNPQYPLLLGLNEHQLHRGQHYRELLQHVTPPAGQRWEAVLANLSSELPQPQELRLSDGRTVELRFSPVPNRGVVNVVLE RTERKALEEALLHSQKMKAVGQLTGGLAHDFNNLLAVIIGSLELTTQQTQDAQTEQRIARALKAAERGAQLTQRLLAFSR KQALHPQAITLQTLVENLQELLRHSLPTTLSLSIETQRPGWPAWVDANQLENALINLVVNARDAMEGRSGMVKIRIYNQR VVRSGGKKQDMVALEVIDTGCGMSEEVKAQVFEPFFTTKAVGSGSGLGLSMVYGFVRQSGGRVQIETAPGEGTLVRLQLP RAPAPAIAQAPPLPLEESDGTDSLVLVLEDENDVRHTLCEHLHQLGYLTLDCADSHEALALLRQTPDIGVLVSDLMLPGE LDGVQVIGLAREINPRLTALLISGQDIRRHHEDTLPNVELLRKPFSQRQLALALQRARRSNAAADAIRRE
Sequences:
>Translated_870_residues MRRLPFLAGARGRLLMFNLLVVAVTLMVSGVAIVGFNHAGKLQEQVQAQTLNEMNGSMALSRDTSNVATAAIRLSQVVGA LEYQSESARLKQTQLALQASLSRLADAPLAHSEPELVQRIISRSNALETSVTRMLDLGHARHLQRNILLSGLYQAQSTLR HIASLNQRNNQNPPSLPLLSQIDRLLAIAIQTPTPKAAAQQLDSVMAYWPQHSPDALVDEKMRQFRDSEQRLLPETLELE QSDLALAYYTYHIKALVAMLNDDINLYVQKVADESELRTHQTHRELSSISWFIGLFALLALVITGFAGWYIYRNLGSNLT AIAGAMTRLARGEREVSVPALQRRDELGDLARAFNVFARNTASLEQTSRLLKEKSTQLETTFLAMRDGFALFDNDGQLVV WNPQYPLLLGLNEHQLHRGQHYRELLQHVTPPAGQRWEAVLANLSSELPQPQELRLSDGRTVELRFSPVPNRGVVNVVLE RTERKALEEALLHSQKMKAVGQLTGGLAHDFNNLLAVIIGSLELTTQQTQDAQTEQRIARALKAAERGAQLTQRLLAFSR KQALHPQAITLQTLVENLQELLRHSLPTTLSLSIETQRPGWPAWVDANQLENALINLVVNARDAMEGRSGMVKIRIYNQR VVRSGGKKQDMVALEVIDTGCGMSEEVKAQVFEPFFTTKAVGSGSGLGLSMVYGFVRQSGGRVQIETAPGEGTLVRLQLP RAPAPAIAQAPPLPLEESDGTDSLVLVLEDENDVRHTLCEHLHQLGYLTLDCADSHEALALLRQTPDIGVLVSDLMLPGE LDGVQVIGLAREINPRLTALLISGQDIRRHHEDTLPNVELLRKPFSQRQLALALQRARRSNAAADAIRRE >Mature_870_residues MRRLPFLAGARGRLLMFNLLVVAVTLMVSGVAIVGFNHAGKLQEQVQAQTLNEMNGSMALSRDTSNVATAAIRLSQVVGA LEYQSESARLKQTQLALQASLSRLADAPLAHSEPELVQRIISRSNALETSVTRMLDLGHARHLQRNILLSGLYQAQSTLR HIASLNQRNNQNPPSLPLLSQIDRLLAIAIQTPTPKAAAQQLDSVMAYWPQHSPDALVDEKMRQFRDSEQRLLPETLELE QSDLALAYYTYHIKALVAMLNDDINLYVQKVADESELRTHQTHRELSSISWFIGLFALLALVITGFAGWYIYRNLGSNLT AIAGAMTRLARGEREVSVPALQRRDELGDLARAFNVFARNTASLEQTSRLLKEKSTQLETTFLAMRDGFALFDNDGQLVV WNPQYPLLLGLNEHQLHRGQHYRELLQHVTPPAGQRWEAVLANLSSELPQPQELRLSDGRTVELRFSPVPNRGVVNVVLE RTERKALEEALLHSQKMKAVGQLTGGLAHDFNNLLAVIIGSLELTTQQTQDAQTEQRIARALKAAERGAQLTQRLLAFSR KQALHPQAITLQTLVENLQELLRHSLPTTLSLSIETQRPGWPAWVDANQLENALINLVVNARDAMEGRSGMVKIRIYNQR VVRSGGKKQDMVALEVIDTGCGMSEEVKAQVFEPFFTTKAVGSGSGLGLSMVYGFVRQSGGRVQIETAPGEGTLVRLQLP RAPAPAIAQAPPLPLEESDGTDSLVLVLEDENDVRHTLCEHLHQLGYLTLDCADSHEALALLRQTPDIGVLVSDLMLPGE LDGVQVIGLAREINPRLTALLISGQDIRRHHEDTLPNVELLRKPFSQRQLALALQRARRSNAAADAIRRE
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=423, Percent_Identity=26.4775413711584, Blast_Score=120, Evalue=5e-28, Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=28.2157676348548, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1790300, Length=258, Percent_Identity=25.5813953488372, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1788713, Length=369, Percent_Identity=24.9322493224932, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 96387; Mature: 96387
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS00283 SOYBEAN_KUNITZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLPFLAGARGRLLMFNLLVVAVTLMVSGVAIVGFNHAGKLQEQVQAQTLNEMNGSMAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEE SRDTSNVATAAIRLSQVVGALEYQSESARLKQTQLALQASLSRLADAPLAHSEPELVQRI ECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH ISRSNALETSVTRMLDLGHARHLQRNILLSGLYQAQSTLRHIASLNQRNNQNPPSLPLLS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH QIDRLLAIAIQTPTPKAAAQQLDSVMAYWPQHSPDALVDEKMRQFRDSEQRLLPETLELE HHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHCCHHHCCC QSDLALAYYTYHIKALVAMLNDDINLYVQKVADESELRTHQTHRELSSISWFIGLFALLA CCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVITGFAGWYIYRNLGSNLTAIAGAMTRLARGEREVSVPALQRRDELGDLARAFNVFARN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC TASLEQTSRLLKEKSTQLETTFLAMRDGFALFDNDGQLVVWNPQYPLLLGLNEHQLHRGQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCEEECCCHHHHHCCH HYRELLQHVTPPAGQRWEAVLANLSSELPQPQELRLSDGRTVELRFSPVPNRGVVNVVLE HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCHHHHHHH RTERKALEEALLHSQKMKAVGQLTGGLAHDFNNLLAVIIGSLELTTQQTQDAQTEQRIAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHH ALKAAERGAQLTQRLLAFSRKQALHPQAITLQTLVENLQELLRHSLPTTLSLSIETQRPG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC WPAWVDANQLENALINLVVNARDAMEGRSGMVKIRIYNQRVVRSGGKKQDMVALEVIDTG CCCCCCHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECHHHHHCCCCCCCEEEEEEEECC CGMSEEVKAQVFEPFFTTKAVGSGSGLGLSMVYGFVRQSGGRVQIETAPGEGTLVRLQLP CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECC RAPAPAIAQAPPLPLEESDGTDSLVLVLEDENDVRHTLCEHLHQLGYLTLDCADSHEALA CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHHH LLRQTPDIGVLVSDLMLPGELDGVQVIGLAREINPRLTALLISGQDIRRHHEDTLPNVEL HHHCCCCCHHHHHHHCCCCCCCCEEEEEEHHHCCCCEEEEEECCHHHHHHHHCCCCCHHH LRKPFSQRQLALALQRARRSNAAADAIRRE HHCCHHHHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MRRLPFLAGARGRLLMFNLLVVAVTLMVSGVAIVGFNHAGKLQEQVQAQTLNEMNGSMAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEE SRDTSNVATAAIRLSQVVGALEYQSESARLKQTQLALQASLSRLADAPLAHSEPELVQRI ECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH ISRSNALETSVTRMLDLGHARHLQRNILLSGLYQAQSTLRHIASLNQRNNQNPPSLPLLS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH QIDRLLAIAIQTPTPKAAAQQLDSVMAYWPQHSPDALVDEKMRQFRDSEQRLLPETLELE HHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHCCHHHCCC QSDLALAYYTYHIKALVAMLNDDINLYVQKVADESELRTHQTHRELSSISWFIGLFALLA CCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVITGFAGWYIYRNLGSNLTAIAGAMTRLARGEREVSVPALQRRDELGDLARAFNVFARN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC TASLEQTSRLLKEKSTQLETTFLAMRDGFALFDNDGQLVVWNPQYPLLLGLNEHQLHRGQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCEEECCCHHHHHCCH HYRELLQHVTPPAGQRWEAVLANLSSELPQPQELRLSDGRTVELRFSPVPNRGVVNVVLE HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCHHHHHHH RTERKALEEALLHSQKMKAVGQLTGGLAHDFNNLLAVIIGSLELTTQQTQDAQTEQRIAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHH ALKAAERGAQLTQRLLAFSRKQALHPQAITLQTLVENLQELLRHSLPTTLSLSIETQRPG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC WPAWVDANQLENALINLVVNARDAMEGRSGMVKIRIYNQRVVRSGGKKQDMVALEVIDTG CCCCCCHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECHHHHHCCCCCCCEEEEEEEECC CGMSEEVKAQVFEPFFTTKAVGSGSGLGLSMVYGFVRQSGGRVQIETAPGEGTLVRLQLP CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECC RAPAPAIAQAPPLPLEESDGTDSLVLVLEDENDVRHTLCEHLHQLGYLTLDCADSHEALA CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHHH LLRQTPDIGVLVSDLMLPGELDGVQVIGLAREINPRLTALLISGQDIRRHHEDTLPNVEL HHHCCCCCHHHHHHHCCCCCCCCEEEEEEHHHCCCCEEEEEECCHHHHHHHHCCCCCHHH LRKPFSQRQLALALQRARRSNAAADAIRRE HHCCHHHHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA