| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is mtnD
Identifier: 157369189
GI number: 157369189
Start: 1041891
End: 1042433
Strand: Direct
Name: mtnD
Synonym: Spro_0944
Alternate gene names: 157369189
Gene position: 1041891-1042433 (Clockwise)
Preceding gene: 157369188
Following gene: 157369191
Centisome position: 19.12
GC content: 57.64
Gene sequence:
>543_bases ATGAGTGGATTGACCATTTTCAGCGATCAAGAGCCGCAACAGCCGCTGTGGCAGAGCCGTGACGCGCAGGCCATTGGGCA GCAACTGGCACAGATTGGCGTACGTTTTGAACGCTGGCAGGCGGATCGTGAACTGGGTGAAAACCCGGATCCGGCCGTCG TGATCGCCGCCTATCAGCATCAGATCGACCGGCTGGTGGCGGAGAAGGGCTACCAGAGTTGGGATGTGATCAGCATGCGT CCGGATAATGCCCAGCGCGAAGTGTTGCGCAGCAAGTTTCTGTCCGAGCATACCCACGGCGAAGATGAAGTGCGTTTCTT TGTCGAGGGGGCCGGGCTGTTCTGCCTGCATCTGGATGGCAAGATCTTCCAGATCCTGTGTGAGAAGAACGATCTGATCT CGGTACCGGCCAATACCCGTCATTGGTTCGATATGGGCTCAGCACCGAATTTCACTGCGATCCGCGTGTTTGATAACCCG GAAGGCTGGGTGGCGCATTTCACCGGCGATAACATCGCCGATGCCTACCCGCGTCTCGACTGA
Upstream 100 bases:
>100_bases GTTGGCATACCTGCCAACTGATCCGCGATGAAGCCGATAGCCAAAGCCAGCATCCGCAGGTTAACCGTTTTGATCAAATC GATTTAGGGGAGTTTGCCTC
Downstream 100 bases:
>100_bases GCGCTATAACGCGGGCTTTAACCCAACGCCCGCTGAAAAATCCCTTCACTGACCTGCTGTGGCGTGATCACGCCGCTGTC GAAGACCCAACCGCTAATCA
Product: acireductone dioxygenase ARD
Products: NA
Alternate protein names: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSGLTIFSDQEPQQPLWQSRDAQAIGQQLAQIGVRFERWQADRELGENPDPAVVIAAYQHQIDRLVAEKGYQSWDVISMR PDNAQREVLRSKFLSEHTHGEDEVRFFVEGAGLFCLHLDGKIFQILCEKNDLISVPANTRHWFDMGSAPNFTAIRVFDNP EGWVAHFTGDNIADAYPRLD
Sequences:
>Translated_180_residues MSGLTIFSDQEPQQPLWQSRDAQAIGQQLAQIGVRFERWQADRELGENPDPAVVIAAYQHQIDRLVAEKGYQSWDVISMR PDNAQREVLRSKFLSEHTHGEDEVRFFVEGAGLFCLHLDGKIFQILCEKNDLISVPANTRHWFDMGSAPNFTAIRVFDNP EGWVAHFTGDNIADAYPRLD >Mature_179_residues SGLTIFSDQEPQQPLWQSRDAQAIGQQLAQIGVRFERWQADRELGENPDPAVVIAAYQHQIDRLVAEKGYQSWDVISMRP DNAQREVLRSKFLSEHTHGEDEVRFFVEGAGLFCLHLDGKIFQILCEKNDLISVPANTRHWFDMGSAPNFTAIRVFDNPE GWVAHFTGDNIADAYPRLD
Specific function: Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- me
COG id: COG1791
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acireductone dioxygenase (ARD) family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTND_SERP5 (A8GAB0)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001477178.1 - ProteinModelPortal: A8GAB0 - SMR: A8GAB0 - STRING: A8GAB0 - GeneID: 5605063 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0944 - eggNOG: COG1791 - HOGENOM: HBG660685 - OMA: CEKNDLI - ProtClustDB: CLSK928049 - BioCyc: SPRO399741:SPRO_0944-MONOMER - HAMAP: MF_01682 - InterPro: IPR004313 - InterPro: IPR011051 - InterPro: IPR014710 - Gene3D: G3DSA:2.60.120.10 - PANTHER: PTHR23418
Pfam domain/function: PF03079 ARD; SSF51182 RmlC_like_cupin
EC number: =1.13.11.54; =1.13.11.53
Molecular weight: Translated: 20527; Mature: 20396
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLTIFSDQEPQQPLWQSRDAQAIGQQLAQIGVRFERWQADRELGENPDPAVVIAAYQH CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEHHHHH QIDRLVAEKGYQSWDVISMRPDNAQREVLRSKFLSEHTHGEDEVRFFVEGAGLFCLHLDG HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECC KIFQILCEKNDLISVPANTRHWFDMGSAPNFTAIRVFDNPEGWVAHFTGDNIADAYPRLD CEEEEEECCCCEEECCCCCCEEEECCCCCCEEEEEEEECCCCEEEEECCCCHHCCCCCCC >Mature Secondary Structure SGLTIFSDQEPQQPLWQSRDAQAIGQQLAQIGVRFERWQADRELGENPDPAVVIAAYQH CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEHHHHH QIDRLVAEKGYQSWDVISMRPDNAQREVLRSKFLSEHTHGEDEVRFFVEGAGLFCLHLDG HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECC KIFQILCEKNDLISVPANTRHWFDMGSAPNFTAIRVFDNPEGWVAHFTGDNIADAYPRLD CEEEEEECCCCEEECCCCCCEEEECCCCCCEEEEEEEECCCCEEEEECCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA