| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ywrD [H]
Identifier: 157369175
GI number: 157369175
Start: 1029458
End: 1031044
Strand: Reverse
Name: ywrD [H]
Synonym: Spro_0930
Alternate gene names: 157369175
Gene position: 1031044-1029458 (Counterclockwise)
Preceding gene: 157369185
Following gene: 157369174
Centisome position: 18.92
GC content: 63.83
Gene sequence:
>1587_bases ATGATTAACAGCAACACCGCGCCATTGGGCATGGCCGTCACGCCGCACCACCTCGCCAGCGAAAGCGCACTGGCGATACT GCGCAAAGGCGGCAACGCGATTGAAGCCATGGTCGCCGCCGCCGCTACCATCGCCGTGGTCTACCCACACATGAACGGCC TGGGTGGCGATGGGTTCTGGCTGATCGTGCCGCCGCAGGGTGATCCGGTGGCCATCGACGCCAGCGGCGCAGCCGGATCG CTGGCCACGCTGGATTTTTACGCCGGGGAAAGTCACATTCCCCATCGGGGGCCAAAAGCCGCGCTGACCGTCGCCGGCAC CGTCGGGGGCTGGCAGGAAGCACTGGATTACTCCGCTGAACTGGGCGGCCAGCAGTTGCCGTTGCCACGCCTGCTGGCTG ATGCGATTCGCTACGCTGCAGACGGTATTCCGGTCACCGCCTCGCAGGAGGCGGCTACCCGCAGCAAATATCATGAGCTG GCAGATCAGGAGCATTTTGCCCGCACCTACCTGCCGCACGGTGAAATTCCTCACGCCGGACAGCGTTTCTGCCAGCCGCA GTTGGCGGAGACTCTGATTACCCTGGCCGAACAGGGGTTGGACAGCTTCTATCGCGGCCGATTGGCAGAGAGCATGGCGG CGGATATGGCCAGGCTGGGCATGCCGCTCACTGCGCAGGATCTGGCGGATTATCGGCCGCGCCGCCGCACGCCGCTGCGG CTGGAGCATCAGAAAGGCGAGATCTTTAACCTGACGCCGCCGACTCAGGGCCTGGTGTCACTGGCGATCCTCGGGCTGAC CGACCGTCTGCCACTTGCCAGCCGCAGCGAAGGCGCGGTGGTACATGGCATCGTCGAGGCCACCAAACTGGCTTTCGGCC TGCGTGACCAATTCATCACCGATCCGCGTCAGATGACTCAGGATCCACAGGCATTGTTGACAGCCGAACACCTGGACGCG CTGGCCAGGCGCATCGATCCTGAACAGGCCGCCTCCTGGGGCAAAGGCAAAGGGCCGGGCGATACCGTGTGGATGGGGAC GATGGACAGCAGCGGTCTGGCGGTGTCCTTTATTCAAAGTATCTATCACGAATTCGGCAGCGGCGTGGTGCTGCCGCAAA GTGGCGTGCTGTGGCAAAACCGTGGCGCGTCTTTCAGCCTGGATGCCGCGCACCTGCTGGCATTGGCGCCGGGTAAACAA CCCTTCCATACCTTGAACCCGGCAGCGGCACGCCTGTATGACGGGCGTACCCTGGTATACGGCTCGATGGGCGGTGACGG CCAGCCGCAAACCCAGGCAGCGGTGTTTGTTCGCCATGTGGTGCAGGGGCTGCCGCTGCAACAGGCGATCAGCGCGCCGC GCTGGCTGCTCGGCCGCACCTGGGGTGAAAGCTCCGACTCATTAAAACTGGAGGGGCGTTTTAGTCAGGAAACCCTGGCC TACCTGCGTCAACGCGGCCACGAGGTAGAACTCTTAGCGGATTTCAGCGAGGCGGTCGGCCACGCCGGCGCCATTGTTCG CCATACTAACGGCATGCTCGAAGGCGCTTTTGATCCGCGCAGCAACGGCAGCGCCGCCGGCTTCTAG
Upstream 100 bases:
>100_bases CAATCCACCCGCTGGCAAGCGATTATTGTCCTGGCAGAAAACATGGAACGTCTCTTGCTTGTGTTTGAGGCAGACGCTGA CCTCAAACAAGGGCCAAGAA
Downstream 100 bases:
>100_bases CCGCTCTTTCAATAAGGGGATCCCCATGAACCATCCACCTGCCACCGACTGGGCGGCTTATATCAGCCAGATGGAAAACA TACTGGCCCTGCAGCTCAAT
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MINSNTAPLGMAVTPHHLASESALAILRKGGNAIEAMVAAAATIAVVYPHMNGLGGDGFWLIVPPQGDPVAIDASGAAGS LATLDFYAGESHIPHRGPKAALTVAGTVGGWQEALDYSAELGGQQLPLPRLLADAIRYAADGIPVTASQEAATRSKYHEL ADQEHFARTYLPHGEIPHAGQRFCQPQLAETLITLAEQGLDSFYRGRLAESMAADMARLGMPLTAQDLADYRPRRRTPLR LEHQKGEIFNLTPPTQGLVSLAILGLTDRLPLASRSEGAVVHGIVEATKLAFGLRDQFITDPRQMTQDPQALLTAEHLDA LARRIDPEQAASWGKGKGPGDTVWMGTMDSSGLAVSFIQSIYHEFGSGVVLPQSGVLWQNRGASFSLDAAHLLALAPGKQ PFHTLNPAAARLYDGRTLVYGSMGGDGQPQTQAAVFVRHVVQGLPLQQAISAPRWLLGRTWGESSDSLKLEGRFSQETLA YLRQRGHEVELLADFSEAVGHAGAIVRHTNGMLEGAFDPRSNGSAAGF
Sequences:
>Translated_528_residues MINSNTAPLGMAVTPHHLASESALAILRKGGNAIEAMVAAAATIAVVYPHMNGLGGDGFWLIVPPQGDPVAIDASGAAGS LATLDFYAGESHIPHRGPKAALTVAGTVGGWQEALDYSAELGGQQLPLPRLLADAIRYAADGIPVTASQEAATRSKYHEL ADQEHFARTYLPHGEIPHAGQRFCQPQLAETLITLAEQGLDSFYRGRLAESMAADMARLGMPLTAQDLADYRPRRRTPLR LEHQKGEIFNLTPPTQGLVSLAILGLTDRLPLASRSEGAVVHGIVEATKLAFGLRDQFITDPRQMTQDPQALLTAEHLDA LARRIDPEQAASWGKGKGPGDTVWMGTMDSSGLAVSFIQSIYHEFGSGVVLPQSGVLWQNRGASFSLDAAHLLALAPGKQ PFHTLNPAAARLYDGRTLVYGSMGGDGQPQTQAAVFVRHVVQGLPLQQAISAPRWLLGRTWGESSDSLKLEGRFSQETLA YLRQRGHEVELLADFSEAVGHAGAIVRHTNGMLEGAFDPRSNGSAAGF >Mature_528_residues MINSNTAPLGMAVTPHHLASESALAILRKGGNAIEAMVAAAATIAVVYPHMNGLGGDGFWLIVPPQGDPVAIDASGAAGS LATLDFYAGESHIPHRGPKAALTVAGTVGGWQEALDYSAELGGQQLPLPRLLADAIRYAADGIPVTASQEAATRSKYHEL ADQEHFARTYLPHGEIPHAGQRFCQPQLAETLITLAEQGLDSFYRGRLAESMAADMARLGMPLTAQDLADYRPRRRTPLR LEHQKGEIFNLTPPTQGLVSLAILGLTDRLPLASRSEGAVVHGIVEATKLAFGLRDQFITDPRQMTQDPQALLTAEHLDA LARRIDPEQAASWGKGKGPGDTVWMGTMDSSGLAVSFIQSIYHEFGSGVVLPQSGVLWQNRGASFSLDAAHLLALAPGKQ PFHTLNPAAARLYDGRTLVYGSMGGDGQPQTQAAVFVRHVVQGLPLQQAISAPRWLLGRTWGESSDSLKLEGRFSQETLA YLRQRGHEVELLADFSEAVGHAGAIVRHTNGMLEGAFDPRSNGSAAGF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=536, Percent_Identity=27.2388059701493, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI73915090, Length=536, Percent_Identity=27.2388059701493, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI73915096, Length=536, Percent_Identity=27.2388059701493, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI73915094, Length=536, Percent_Identity=27.2388059701493, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI113429324, Length=538, Percent_Identity=26.3940520446097, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI113429326, Length=541, Percent_Identity=25.8780036968577, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI109148539, Length=544, Percent_Identity=27.2058823529412, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI153266885, Length=570, Percent_Identity=25.6140350877193, Blast_Score=93, Evalue=6e-19, Organism=Homo sapiens, GI153266901, Length=571, Percent_Identity=25.569176882662, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI153266907, Length=554, Percent_Identity=26.3537906137184, Blast_Score=89, Evalue=8e-18, Organism=Escherichia coli, GI1789856, Length=548, Percent_Identity=29.9270072992701, Blast_Score=202, Evalue=4e-53, Organism=Caenorhabditis elegans, GI212646519, Length=531, Percent_Identity=24.6704331450094, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI72000294, Length=531, Percent_Identity=24.6704331450094, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17542894, Length=511, Percent_Identity=25.6360078277886, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17506189, Length=533, Percent_Identity=24.015009380863, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193208247, Length=487, Percent_Identity=24.6406570841889, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI193208245, Length=487, Percent_Identity=24.6406570841889, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI18859893, Length=536, Percent_Identity=26.1194029850746, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI161077878, Length=552, Percent_Identity=24.4565217391304, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI45551474, Length=552, Percent_Identity=24.4565217391304, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24642670, Length=552, Percent_Identity=24.4565217391304, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI24642666, Length=552, Percent_Identity=24.4565217391304, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI161077880, Length=552, Percent_Identity=24.4565217391304, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI161077496, Length=506, Percent_Identity=23.5177865612648, Blast_Score=82, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 56289; Mature: 56289
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINSNTAPLGMAVTPHHLASESALAILRKGGNAIEAMVAAAATIAVVYPHMNGLGGDGFW CCCCCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCCCEEE LIVPPQGDPVAIDASGAAGSLATLDFYAGESHIPHRGPKAALTVAGTVGGWQEALDYSAE EEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH LGGQQLPLPRLLADAIRYAADGIPVTASQEAATRSKYHELADQEHFARTYLPHGEIPHAG CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QRFCQPQLAETLITLAEQGLDSFYRGRLAESMAADMARLGMPLTAQDLADYRPRRRTPLR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCE LEHQKGEIFNLTPPTQGLVSLAILGLTDRLPLASRSEGAVVHGIVEATKLAFGLRDQFIT EECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCC DPRQMTQDPQALLTAEHLDALARRIDPEQAASWGKGKGPGDTVWMGTMDSSGLAVSFIQS CHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHH IYHEFGSGVVLPQSGVLWQNRGASFSLDAAHLLALAPGKQPFHTLNPAAARLYDGRTLVY HHHHHCCCEEECCCCCEECCCCCCEECCHHHHEEECCCCCCCCCCCHHHHHHCCCCEEEE GSMGGDGQPQTQAAVFVRHVVQGLPLQQAISAPRWLLGRTWGESSDSLKLEGRFSQETLA ECCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCCCCCCCCCEEEECCCCHHHHH YLRQRGHEVELLADFSEAVGHAGAIVRHTNGMLEGAFDPRSNGSAAGF HHHHCCCEEEEEHHHHHHHHHCCEEEEECCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MINSNTAPLGMAVTPHHLASESALAILRKGGNAIEAMVAAAATIAVVYPHMNGLGGDGFW CCCCCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCCCEEE LIVPPQGDPVAIDASGAAGSLATLDFYAGESHIPHRGPKAALTVAGTVGGWQEALDYSAE EEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH LGGQQLPLPRLLADAIRYAADGIPVTASQEAATRSKYHELADQEHFARTYLPHGEIPHAG CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QRFCQPQLAETLITLAEQGLDSFYRGRLAESMAADMARLGMPLTAQDLADYRPRRRTPLR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCE LEHQKGEIFNLTPPTQGLVSLAILGLTDRLPLASRSEGAVVHGIVEATKLAFGLRDQFIT EECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCC DPRQMTQDPQALLTAEHLDALARRIDPEQAASWGKGKGPGDTVWMGTMDSSGLAVSFIQS CHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHH IYHEFGSGVVLPQSGVLWQNRGASFSLDAAHLLALAPGKQPFHTLNPAAARLYDGRTLVY HHHHHCCCEEECCCCCEECCCCCCEECCHHHHEEECCCCCCCCCCCHHHHHHCCCCEEEE GSMGGDGQPQTQAAVFVRHVVQGLPLQQAISAPRWLLGRTWGESSDSLKLEGRFSQETLA ECCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCCCCCCCCCEEEECCCCHHHHH YLRQRGHEVELLADFSEAVGHAGAIVRHTNGMLEGAFDPRSNGSAAGF HHHHCCCEEEEEHHHHHHHHHCCEEEEECCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]