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The map label for this gene is yafV [H]

Identifier: 157369185

GI number: 157369185

Start: 1038512

End: 1039285

Strand: Reverse

Name: yafV [H]

Synonym: Spro_0940

Alternate gene names: 157369185

Gene position: 1039285-1038512 (Counterclockwise)

Preceding gene: 157369186

Following gene: 157369175

Centisome position: 19.07

GC content: 59.43

Gene sequence:

>774_bases
ATGTCGACTTTAAAAATTACCCTGTTGCAGCAACCCCTGGTTTGGCGTGATGGCGAAGCTAACCTGCGGCATTTTGATGA
GCTGTTGGCGCCATTAAGCGGCCGCGATTTGATTGTACTGCCGGAGATGTTTACCACCGGTTTTGCCATGGATGCCGGAG
AAAGTGCACTGCCGGAACAACAGGTTGTCAACTGGCTGCACGGTTGGGCGAGCAAAAGTAACACTCTGGTCGGCGGCAGC
GTGGCGCTGAAAACCGCCGAAGGCGCGGTTAACCGTTTCCTGCTGGTGGAGCCGAACGGCCGGGTGCATGCCTATGATAA
GCGCCACCTGTTCCGCATGGCCGGTGAGCACCTGCACTATCAGGCAGGCAAAAAACGTGAAATTTTCGAATGGCGCGGCT
GGCGCATTCTGCCGCAGATCTGCTACGACCTGCGCTTCCCGGTGTGGTCACGCTATCAGCAGGATTACGATCTGGCGCTG
TACGTTGCCAACTGGCCGGCCCCGCGCAGTAAACACTGGCAAACGCTGTTGGCCGCTCGTGCCATCGAGAATCAGGTCTA
TGTGGCCGGTTGTAACCGCGTCGGCGAAGACGGTAACGGCCTGAACTACAGCGGTGACAGCCTGATCCTCAGCCCGCAGG
GGGAAACTCTGGCCCAGGTGGAACCCGGTGCCGCCGCACGGCTGGACGCCGAACTGTCGCTGGAAAACCTGCAAAGCTAC
CGCAGCGCCTTCCCGGCCTGGCGTGATGCCGACAGCTTCCTGCGCCACGATTAA

Upstream 100 bases:

>100_bases
TCCCGCTGTCGGTCTTCTGTGCCGATCCTTTCCCCCATAAATTGATCCGGCTGTGCTTCGCTAAACAGGATGCCACGCTG
GATGCGGCTGCGGAGCGGTT

Downstream 100 bases:

>100_bases
TCATTGCGGGTGCGGTTCGCTGCACCCGTAACTTCAGACGAGCGTCTAACTGCCCCGGTAGGTCGAGTAGGAATATGGGC
TGATGAGCAGCGGTAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSTLKITLLQQPLVWRDGEANLRHFDELLAPLSGRDLIVLPEMFTTGFAMDAGESALPEQQVVNWLHGWASKSNTLVGGS
VALKTAEGAVNRFLLVEPNGRVHAYDKRHLFRMAGEHLHYQAGKKREIFEWRGWRILPQICYDLRFPVWSRYQQDYDLAL
YVANWPAPRSKHWQTLLAARAIENQVYVAGCNRVGEDGNGLNYSGDSLILSPQGETLAQVEPGAAARLDAELSLENLQSY
RSAFPAWRDADSFLRHD

Sequences:

>Translated_257_residues
MSTLKITLLQQPLVWRDGEANLRHFDELLAPLSGRDLIVLPEMFTTGFAMDAGESALPEQQVVNWLHGWASKSNTLVGGS
VALKTAEGAVNRFLLVEPNGRVHAYDKRHLFRMAGEHLHYQAGKKREIFEWRGWRILPQICYDLRFPVWSRYQQDYDLAL
YVANWPAPRSKHWQTLLAARAIENQVYVAGCNRVGEDGNGLNYSGDSLILSPQGETLAQVEPGAAARLDAELSLENLQSY
RSAFPAWRDADSFLRHD
>Mature_256_residues
STLKITLLQQPLVWRDGEANLRHFDELLAPLSGRDLIVLPEMFTTGFAMDAGESALPEQQVVNWLHGWASKSNTLVGGSV
ALKTAEGAVNRFLLVEPNGRVHAYDKRHLFRMAGEHLHYQAGKKREIFEWRGWRILPQICYDLRFPVWSRYQQDYDLALY
VANWPAPRSKHWQTLLAARAIENQVYVAGCNRVGEDGNGLNYSGDSLILSPQGETLAQVEPGAAARLDAELSLENLQSYR
SAFPAWRDADSFLRHD

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786412, Length=253, Percent_Identity=68.7747035573123, Blast_Score=370, Evalue=1e-104,
Organism=Saccharomyces cerevisiae, GI6323383, Length=273, Percent_Identity=25.2747252747253, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 29075; Mature: 28944

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLKITLLQQPLVWRDGEANLRHFDELLAPLSGRDLIVLPEMFTTGFAMDAGESALPEQ
CCCEEEEEECCCCEEECCCCHHHHHHHHHCCCCCCCEEEECHHHHCCCCCCCCCCCCCHH
QVVNWLHGWASKSNTLVGGSVALKTAEGAVNRFLLVEPNGRVHAYDKRHLFRMAGEHLHY
HHHHHHHHHCCCCCEEECCEEEEEECCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHEE
QAGKKREIFEWRGWRILPQICYDLRFPVWSRYQQDYDLALYVANWPAPRSKHWQTLLAAR
CCCCCCCHHHCCCCEEHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
AIENQVYVAGCNRVGEDGNGLNYSGDSLILSPQGETLAQVEPGAAARLDAELSLENLQSY
HHCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEECHHHHHHHHHHH
RSAFPAWRDADSFLRHD
HHHCCCCCCCHHHHCCC
>Mature Secondary Structure 
STLKITLLQQPLVWRDGEANLRHFDELLAPLSGRDLIVLPEMFTTGFAMDAGESALPEQ
CCEEEEEECCCCEEECCCCHHHHHHHHHCCCCCCCEEEECHHHHCCCCCCCCCCCCCHH
QVVNWLHGWASKSNTLVGGSVALKTAEGAVNRFLLVEPNGRVHAYDKRHLFRMAGEHLHY
HHHHHHHHHCCCCCEEECCEEEEEECCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHEE
QAGKKREIFEWRGWRILPQICYDLRFPVWSRYQQDYDLALYVANWPAPRSKHWQTLLAAR
CCCCCCCHHHCCCCEEHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
AIENQVYVAGCNRVGEDGNGLNYSGDSLILSPQGETLAQVEPGAAARLDAELSLENLQSY
HHCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEECHHHHHHHHHHH
RSAFPAWRDADSFLRHD
HHHCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]