| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369161
Identifier: 157369161
GI number: 157369161
Start: 1015058
End: 1015996
Strand: Direct
Name: 157369161
Synonym: Spro_0916
Alternate gene names: NA
Gene position: 1015058-1015996 (Clockwise)
Preceding gene: 157369160
Following gene: 157369168
Centisome position: 18.63
GC content: 54.42
Gene sequence:
>939_bases ATGGGTGAGTTCCAGTTCAATCAAGATTATCCCCGAGATTTAATCGGCTACGGTGGTCGTCCGCCGCACGCTGGTTGGCC TGGTCAGGCGCGAATCGCGGTGCAGTTTGTTCTCAACTACGAAGAGGGCGCGGAAAATAACGTGCTGCACGGCGACGCCG GTTCGGAACAATTTCTTTCCGATATCATTGGTGCTGCCAGTTATCCCGAACGGCATATGTCGATGGATTCCTTGTACGAA TATGGTTCACGTGCTGGTTTCTGGCGCATTCATAATGAGTTTCAGCGCCGTGGTCTGCCGTTGACGGTGTTTGGCGTGGC AATGGCACTGGCGCGTAATCCGTTGGTGGTTGAAGCGATTAAAAACGCCGATTACGACGTAGTCAGCCATGGTTGGCGCT GGATCCACTATCAACATATGGATGAAGCGACCGAACGGCAGCATATGCAGCAGGCCATCACAGTACTACGCGATCTGTTC GGCAAGGCACCGCTCGGCTGGTATACCGGTCGCGATAGCCCGAATACTCGTCGGTTGGTGGTGGAACAAGGAGGTTTACT GTACGACAGCGACTATTACGGCGACGACCTGCCGTTCTGGACCGAGGTGCAGTGCGCCAATGGCCAGAAGAAACCGCATT TGATCGTGCCTTATACGTTAGAAGCTAATGACATGCGTTTCGCTTCGCCGCAGGGGTTTAACACCGGCGAGCAGTTCTTT ACCTATCTTAAAGACAGTTTTGACGTGCTGTATGCCGAAGGGGCAGAGTCGCCGAAGATGCTGTCGATCGGCATGCATTG TCGCTTGCTGGGGCGTCCTGGCAAGTTTCGCGCATTGCAGCGCTTTCTGGATTATATCGAGCAACACGATCGGGTTTGGG TATGCCGGCGGCAGGATATCGCCGAGCACTGGGTCGCGCAGCACCCGTTCAAGAAATGA
Upstream 100 bases:
>100_bases TGAGCACCAGCAAACACGGCGATCTGGATTTTCCGCGGGCAAAACCCTTGTCCGGTATGTTTGGCAGTTTTAGTGGGTAA TCAGTAAAGGGGAAACAGCG
Downstream 100 bases:
>100_bases AGAAAGGGCCGAAGTGGCCCTGGATTTTTATGCCACCGAAAGGGTTCGATGACCAACGGGATCCTGGCTCGGCCTGACGA TAATTTCAATGTCATAGCCA
Product: chitin deacetylase
Products: NA
Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Family; Uricase; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Allantoinase; Deacetylase
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MGEFQFNQDYPRDLIGYGGRPPHAGWPGQARIAVQFVLNYEEGAENNVLHGDAGSEQFLSDIIGAASYPERHMSMDSLYE YGSRAGFWRIHNEFQRRGLPLTVFGVAMALARNPLVVEAIKNADYDVVSHGWRWIHYQHMDEATERQHMQQAITVLRDLF GKAPLGWYTGRDSPNTRRLVVEQGGLLYDSDYYGDDLPFWTEVQCANGQKKPHLIVPYTLEANDMRFASPQGFNTGEQFF TYLKDSFDVLYAEGAESPKMLSIGMHCRLLGRPGKFRALQRFLDYIEQHDRVWVCRRQDIAEHWVAQHPFKK
Sequences:
>Translated_312_residues MGEFQFNQDYPRDLIGYGGRPPHAGWPGQARIAVQFVLNYEEGAENNVLHGDAGSEQFLSDIIGAASYPERHMSMDSLYE YGSRAGFWRIHNEFQRRGLPLTVFGVAMALARNPLVVEAIKNADYDVVSHGWRWIHYQHMDEATERQHMQQAITVLRDLF GKAPLGWYTGRDSPNTRRLVVEQGGLLYDSDYYGDDLPFWTEVQCANGQKKPHLIVPYTLEANDMRFASPQGFNTGEQFF TYLKDSFDVLYAEGAESPKMLSIGMHCRLLGRPGKFRALQRFLDYIEQHDRVWVCRRQDIAEHWVAQHPFKK >Mature_311_residues GEFQFNQDYPRDLIGYGGRPPHAGWPGQARIAVQFVLNYEEGAENNVLHGDAGSEQFLSDIIGAASYPERHMSMDSLYEY GSRAGFWRIHNEFQRRGLPLTVFGVAMALARNPLVVEAIKNADYDVVSHGWRWIHYQHMDEATERQHMQQAITVLRDLFG KAPLGWYTGRDSPNTRRLVVEQGGLLYDSDYYGDDLPFWTEVQCANGQKKPHLIVPYTLEANDMRFASPQGFNTGEQFFT YLKDSFDVLYAEGAESPKMLSIGMHCRLLGRPGKFRALQRFLDYIEQHDRVWVCRRQDIAEHWVAQHPFKK
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35955; Mature: 35824
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEFQFNQDYPRDLIGYGGRPPHAGWPGQARIAVQFVLNYEEGAENNVLHGDAGSEQFLS CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCCHHHHHH DIIGAASYPERHMSMDSLYEYGSRAGFWRIHNEFQRRGLPLTVFGVAMALARNPLVVEAI HHHHCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEH KNADYDVVSHGWRWIHYQHMDEATERQHMQQAITVLRDLFGKAPLGWYTGRDSPNTRRLV HCCCCHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEE VEQGGLLYDSDYYGDDLPFWTEVQCANGQKKPHLIVPYTLEANDMRFASPQGFNTGEQFF EECCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEECCCCCCCCHHHHH TYLKDSFDVLYAEGAESPKMLSIGMHCRLLGRPGKFRALQRFLDYIEQHDRVWVCRRQDI HHHHHHHHEEEECCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECHHHH AEHWVAQHPFKK HHHHHHCCCCCC >Mature Secondary Structure GEFQFNQDYPRDLIGYGGRPPHAGWPGQARIAVQFVLNYEEGAENNVLHGDAGSEQFLS CCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCCHHHHHH DIIGAASYPERHMSMDSLYEYGSRAGFWRIHNEFQRRGLPLTVFGVAMALARNPLVVEAI HHHHCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEH KNADYDVVSHGWRWIHYQHMDEATERQHMQQAITVLRDLFGKAPLGWYTGRDSPNTRRLV HCCCCHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEE VEQGGLLYDSDYYGDDLPFWTEVQCANGQKKPHLIVPYTLEANDMRFASPQGFNTGEQFF EECCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEECCCCCCCCHHHHH TYLKDSFDVLYAEGAESPKMLSIGMHCRLLGRPGKFRALQRFLDYIEQHDRVWVCRRQDI HHHHHHHHEEEECCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECHHHH AEHWVAQHPFKK HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA