Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is 157369168

Identifier: 157369168

GI number: 157369168

Start: 1024689

End: 1025912

Strand: Direct

Name: 157369168

Synonym: Spro_0923

Alternate gene names: NA

Gene position: 1024689-1025912 (Clockwise)

Preceding gene: 157369161

Following gene: 157369169

Centisome position: 18.81

GC content: 59.97

Gene sequence:

>1224_bases
ATGCATATTTCTTCTCCCCCTAAATCACCGACAATTGGGAATACGTCTCCTTCCAACTGGCCACTGGCGCTTTGTGCCGG
GTTGTTGGGCATCGGGCAAAACGGCCTGCTGGTGGCATTGCCGGTATTGGTCAGCATGACTCATCTTTCGCTTTCCGTCT
GGGCCGGGTTACTCACGCTCGGCTCAATGCTGTTTCTGGTCGGCTCGCCGTGGTGGGGCAAGCAGTCCGAAGTTCGCGGC
TGCAAGTTTGTGGTCACCATGGCGTTAGCAGGGTATTTGTTCAGTTTTGCCTTGCTGGCACTGGCGGTTTGGGGGCTGGC
GGCAGGCTGGCTTTCGCCGATGACGGGATTGGGCGCGCTGATCGTGGCACGGATTATCTATGGTTTGACGGTGTCCGGCA
TGGTGCCTGCCAGTCAGACCTGGGCCCTGCAGCGGGCCGGTTATGAGCAACGTATGTCGGCGCTGGCGACCATCAGCTCC
GGGCTGAGCTGCGGGCGGCTGCTTGGCCCCCTGTGCGCCTCGTTGGCGTTGTCGATTCATCCGATGGCACCGCTGTGGCT
GATGGCGCTTGCGCCATTAATCGCCCTGCTGGTGATATGCCGTCAGCATAACGATCCGCCTTTGCCACCGGTGGCCCATC
AGCAAAACCGACTGCGCCTCAATATGGTGCCTTATTTGTTGTGTGCGGTGCTGTTGGCGGCTTCGGTCAGCCTGATGCAA
CTCGGGTTGGCACCGCATTTGAGCCGTTTATTCAGCCACTCTGCCACCAGCGTTAGCCATCATGTGGCGGTGCTGTTGAG
CGTAGCGGCGGGTTGTACCCTGTTGGCACAGTTTCTGGTGGTGCGCCCACAGCGCTTTAGCGCGTCACAACTGCTGCTGC
TTGCTGCGGTATTGATGGTGGTCGGATTGGGCCTGATGTGCGCTGAGCCGCTGGCGTTGTTCTATGCCGGTTGTGCGCTG
GCCTCCTTTGGCGCGGCTATGGCGACACCGGGCTACCAGCTATTGTTGAATGATAAATTGTCCACCGGCAAAGGGTCGGG
AGTCATCGCCACCAGCCACACGCTGGGTTACGGTCTGAGCGCGCTGATGGTGCCGGTGGTGGCCAGGTTTTATGGTGAGT
CGCAGCTGATTGCGGCGGCTCTGACGATGGCGGTCCTGTTGGGCGGTATCAGCGGCTGGCTGTGGTGCCAGCACCGTGTC
AGGGTAAATTCTGCGGGAGAGTAA

Upstream 100 bases:

>100_bases
TTATATCAATAATATTTATTGTTATCAATCATCCTATGATACAATTTTTCAATGAATTGAACATAACCTTATAATTTTAT
TAACGGTAAATTTACGTTTG

Downstream 100 bases:

>100_bases
CAGCTATGTCCGGCGCATCAAGCTACAGAGTTTTTGATATCACACTGAAAGTAAAAGAAAACGTATCGCCTTCCTTACTG
CGCTGCGTTTTCGAAGGACC

Product: major facilitator transporter

Products: NA

Alternate protein names: Permease; MFS Transporter; Transport Protein ShiF

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MHISSPPKSPTIGNTSPSNWPLALCAGLLGIGQNGLLVALPVLVSMTHLSLSVWAGLLTLGSMLFLVGSPWWGKQSEVRG
CKFVVTMALAGYLFSFALLALAVWGLAAGWLSPMTGLGALIVARIIYGLTVSGMVPASQTWALQRAGYEQRMSALATISS
GLSCGRLLGPLCASLALSIHPMAPLWLMALAPLIALLVICRQHNDPPLPPVAHQQNRLRLNMVPYLLCAVLLAASVSLMQ
LGLAPHLSRLFSHSATSVSHHVAVLLSVAAGCTLLAQFLVVRPQRFSASQLLLLAAVLMVVGLGLMCAEPLALFYAGCAL
ASFGAAMATPGYQLLLNDKLSTGKGSGVIATSHTLGYGLSALMVPVVARFYGESQLIAAALTMAVLLGGISGWLWCQHRV
RVNSAGE

Sequences:

>Translated_407_residues
MHISSPPKSPTIGNTSPSNWPLALCAGLLGIGQNGLLVALPVLVSMTHLSLSVWAGLLTLGSMLFLVGSPWWGKQSEVRG
CKFVVTMALAGYLFSFALLALAVWGLAAGWLSPMTGLGALIVARIIYGLTVSGMVPASQTWALQRAGYEQRMSALATISS
GLSCGRLLGPLCASLALSIHPMAPLWLMALAPLIALLVICRQHNDPPLPPVAHQQNRLRLNMVPYLLCAVLLAASVSLMQ
LGLAPHLSRLFSHSATSVSHHVAVLLSVAAGCTLLAQFLVVRPQRFSASQLLLLAAVLMVVGLGLMCAEPLALFYAGCAL
ASFGAAMATPGYQLLLNDKLSTGKGSGVIATSHTLGYGLSALMVPVVARFYGESQLIAAALTMAVLLGGISGWLWCQHRV
RVNSAGE
>Mature_407_residues
MHISSPPKSPTIGNTSPSNWPLALCAGLLGIGQNGLLVALPVLVSMTHLSLSVWAGLLTLGSMLFLVGSPWWGKQSEVRG
CKFVVTMALAGYLFSFALLALAVWGLAAGWLSPMTGLGALIVARIIYGLTVSGMVPASQTWALQRAGYEQRMSALATISS
GLSCGRLLGPLCASLALSIHPMAPLWLMALAPLIALLVICRQHNDPPLPPVAHQQNRLRLNMVPYLLCAVLLAASVSLMQ
LGLAPHLSRLFSHSATSVSHHVAVLLSVAAGCTLLAQFLVVRPQRFSASQLLLLAAVLMVVGLGLMCAEPLALFYAGCAL
ASFGAAMATPGYQLLLNDKLSTGKGSGVIATSHTLGYGLSALMVPVVARFYGESQLIAAALTMAVLLGGISGWLWCQHRV
RVNSAGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42586; Mature: 42586

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA