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The map label for this gene is ydiY [H]

Identifier: 157369123

GI number: 157369123

Start: 971892

End: 972656

Strand: Reverse

Name: ydiY [H]

Synonym: Spro_0878

Alternate gene names: 157369123

Gene position: 972656-971892 (Counterclockwise)

Preceding gene: 157369126

Following gene: 157369121

Centisome position: 17.85

GC content: 55.69

Gene sequence:

>765_bases
ATGCTCTCTTTACGCGCTCGCCGCGCTATTCCGCTGTTCATTAGCTGCTTAACGACTTTCACCAGTGTTTCAGCCCTTGC
CGACAATACGCTTTTCACCGCGATGGACGATCCGGCCACCGCTAAAAAGCCGTTTGAAGGCAACGTCCAGGCCGGCTACA
ACTCGCAGTCTGGTAACTCACAAAGCTCGACCCTGCTGGCCAACACCAGCATGACCTGGTTCAACAGCGATGCCGCCTAC
AGCCTGTGGGGAGCCGCCAACAACACCACCTCCTCTAACGTGCGCTCGTCTGAAAAGTATCAGGCCGGTGGCCGTACCCG
TTATAACCTGTCCGATCGCAACTACCTGTTCGGTCAGGCAAGTTGGCTTAGTGACCGCTTCAACGGTTATGACTCCCGTT
CCACGCTGACCGGCGGTTATGGTCGCCAAATCCTCAACGGGCCGCTCAGCGACCTGCGAGTTGAATTTGGTCCCGGCGTA
CGTCACGATGAATATCATGGCGGTGGTCGCTCCACCAAAGCGCTGGCTTACGGCGCAGCCAACTATTCGTATCAGTTGAC
CGACAATACCAAGTTCTCCGAAGGTGTTTCCGCACTGGCTAACGAAGAAACCACCTTGAACTCCGAAACCGCGCTAAGCG
TCGCGATTAACGAAAGATTCGCACTGCGTCTGGCTTATAACGTGACTTACAACAGCAAGCCGCCAGCGTCAGCACCGAAG
AACACCGACACCACCACTTCCATCAGCCTGGTGTACGGTCTGTAA

Upstream 100 bases:

>100_bases
ATTAAAAACTTAAGCTAATCGTAGCTATTTTGGTCGCCATGACGAACCGATATAATGTGACTGACATCACTTATAATCAC
TCTTAACAACTGGATCCAAA

Downstream 100 bases:

>100_bases
TCTTTTCGGTTCCGCATTTCTTATACGACTAAGCCCATTATTAATGGGCTTTTTTTATGCCTGAGGCGTCAGAGTCAACC
AGACCATGCCCAAGGCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLSLRARRAIPLFISCLTTFTSVSALADNTLFTAMDDPATAKKPFEGNVQAGYNSQSGNSQSSTLLANTSMTWFNSDAAY
SLWGAANNTTSSNVRSSEKYQAGGRTRYNLSDRNYLFGQASWLSDRFNGYDSRSTLTGGYGRQILNGPLSDLRVEFGPGV
RHDEYHGGGRSTKALAYGAANYSYQLTDNTKFSEGVSALANEETTLNSETALSVAINERFALRLAYNVTYNSKPPASAPK
NTDTTTSISLVYGL

Sequences:

>Translated_254_residues
MLSLRARRAIPLFISCLTTFTSVSALADNTLFTAMDDPATAKKPFEGNVQAGYNSQSGNSQSSTLLANTSMTWFNSDAAY
SLWGAANNTTSSNVRSSEKYQAGGRTRYNLSDRNYLFGQASWLSDRFNGYDSRSTLTGGYGRQILNGPLSDLRVEFGPGV
RHDEYHGGGRSTKALAYGAANYSYQLTDNTKFSEGVSALANEETTLNSETALSVAINERFALRLAYNVTYNSKPPASAPK
NTDTTTSISLVYGL
>Mature_254_residues
MLSLRARRAIPLFISCLTTFTSVSALADNTLFTAMDDPATAKKPFEGNVQAGYNSQSGNSQSSTLLANTSMTWFNSDAAY
SLWGAANNTTSSNVRSSEKYQAGGRTRYNLSDRNYLFGQASWLSDRFNGYDSRSTLTGGYGRQILNGPLSDLRVEFGPGV
RHDEYHGGGRSTKALAYGAANYSYQLTDNTKFSEGVSALANEETTLNSETALSVAINERFALRLAYNVTYNSKPPASAPK
NTDTTTSISLVYGL

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=254, Percent_Identity=57.4803149606299, Blast_Score=306, Evalue=7e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 27503; Mature: 27503

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLRARRAIPLFISCLTTFTSVSALADNTLFTAMDDPATAKKPFEGNVQAGYNSQSGNS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCC
QSSTLLANTSMTWFNSDAAYSLWGAANNTTSSNVRSSEKYQAGGRTRYNLSDRNYLFGQA
CCCEEEEECEEEEECCCCCEEEECCCCCCCCCCCCCCHHHCCCCCEEEECCCCCEEEECH
SWLSDRFNGYDSRSTLTGGYGRQILNGPLSDLRVEFGPGVRHDEYHGGGRSTKALAYGAA
HHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHEEEEECCCCCCCCCCCCCCCCEEEEEECC
NYSYQLTDNTKFSEGVSALANEETTLNSETALSVAINERFALRLAYNVTYNSKPPASAPK
CCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEEEEEEECCCCCCCCCC
NTDTTTSISLVYGL
CCCCCEEEEEEEEC
>Mature Secondary Structure
MLSLRARRAIPLFISCLTTFTSVSALADNTLFTAMDDPATAKKPFEGNVQAGYNSQSGNS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCC
QSSTLLANTSMTWFNSDAAYSLWGAANNTTSSNVRSSEKYQAGGRTRYNLSDRNYLFGQA
CCCEEEEECEEEEECCCCCEEEECCCCCCCCCCCCCCHHHCCCCCEEEECCCCCEEEECH
SWLSDRFNGYDSRSTLTGGYGRQILNGPLSDLRVEFGPGVRHDEYHGGGRSTKALAYGAA
HHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHEEEEECCCCCCCCCCCCCCCCEEEEEECC
NYSYQLTDNTKFSEGVSALANEETTLNSETALSVAINERFALRLAYNVTYNSKPPASAPK
CCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEEEEEEECCCCCCCCCC
NTDTTTSISLVYGL
CCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]