| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369108
Identifier: 157369108
GI number: 157369108
Start: 957347
End: 958516
Strand: Reverse
Name: 157369108
Synonym: Spro_0863
Alternate gene names: NA
Gene position: 958516-957347 (Counterclockwise)
Preceding gene: 157369109
Following gene: 157369107
Centisome position: 17.59
GC content: 57.09
Gene sequence:
>1170_bases ATGGGTGATTATCACCACGGCGTGCGTGTCCTCGAAATCAATGAAGGCACCCGCGTAATTTCCACCGTCTCGACGGCGAT TATTGGCATGGTTTGTACTGCAGAAGATGCCGATGCAAGCCTGTTCCCTCTCAACACTCCAGTGTTGATCACTGACGTTC TGGCCGCCAGTGGCAAGGCCGGCAAAAATGGCACCCTGGCACGCTCGCTGCTGGCGATTGCCGAGCAGGCCAAACCGGTC ACCGTCGTGGTACGTGTGGCAGAAGGCAAAGACGAGGCCGAAACCACCTCCAATATCATTGGCGGCGCCGATGAAAACGG TAAATATACCGGTATGAAAGCCTTGCTGGCGGCACAGGCCGAACTGGGCGTGAAGCCGCGTATTCTGGGTGTGCCAGGCC ACGACAATCTGGAGGTGGCAACCGCACTGGCCGGTATCTGCCAACAACTGCGTGCCTTTGGTTATATCAGCGCTTACGGC TGCAAGACCGTCTCCGACGCCATCAAGTACCGCGCAGGCTTTAGCCAACGCGAACTGATGTTGATCTGGCCAGACTTTGT TAACTGGAACACCACCACCAACAGCAGCGACATCGCATACGCCACCGCTCGTGCGCTGGGTCTGCGCGCCAAGATTGACC AGGAGACTGGCTGGCATAAGACCCTGTCCAACGTCGGCGTCAACGGCGTCAGCGGTATTTCAGCCAGCGTATTTTGGGAT CTGCAAACCGTCGGTACCGATGCTGACCTGCTGAACGAAGCCTGCGTCACCACCCTGATCCGCAAAGATGGCTTCAAGTT TTGGGGCTCACGCACCTGTTCCGACGATCCATTATTCCAGTTCGAAAACTATACCCGCACCGCGCAGGTATTGGCTGACA CCATGGCCGAAGCTCATCTGTGGGCAGTTGACCGCCCGGTTACACCAACGCTGATCCGCGACATGATCGACGGCATCAAA GCCAAGTTCCGCGAGCTGAAATCCGCCGGGCTGATCATTGACGGCGACTGCTGGTACGACGAAAGCGCCAACGATAAAGA AACCCTGAAGGCCGGCAAACTGTTTATCGATTATGACTACACCCCGGTACCGCCGCTGGAAGATTTAACCCTGCGCCAGC GCATCACCGACCGTTACCTGGCGAACTTCGCCGCGTCCGTGAACAGCTAA
Upstream 100 bases:
>100_bases TTTTCCTGCTGTTGTATCAGTTCTCATACATACCCAATGAGATGCGCGGCCCCATCGCGAAGGGCATTCTGTTGTTACCA ACCACAAACGGAGTAATGCT
Downstream 100 bases:
>100_bases GGAGACCTGAATAATGGCACTGCCAAAAAAACTGAAATATCTGAACCTGTTTAACGACGGCTTCAACTACATGGGCGTGG TCTCCGCCATGACCCTGCCA
Product: tail sheath protein
Products: NA
Alternate protein names: Phage Tail Sheath Protein; Bacteriophage Tail Sheath Protein; Phage Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Tail Sheath Protein Bacteriophage; Bacteriophage Tail Sheath Protein; Phage-Related Tail Protein; Bacteriophage P2 Tail Sheath Protein GPFI; Pyocin R2_PP Tail Sheath Protein GpFI; Phage TAIL SHEATH PROTEIN; Pyocin R2_PP Tail Sheath Protein; Phage Tail Sheath-Like Protein; Prophage; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Bacteriophage Contractile Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MGDYHHGVRVLEINEGTRVISTVSTAIIGMVCTAEDADASLFPLNTPVLITDVLAASGKAGKNGTLARSLLAIAEQAKPV TVVVRVAEGKDEAETTSNIIGGADENGKYTGMKALLAAQAELGVKPRILGVPGHDNLEVATALAGICQQLRAFGYISAYG CKTVSDAIKYRAGFSQRELMLIWPDFVNWNTTTNSSDIAYATARALGLRAKIDQETGWHKTLSNVGVNGVSGISASVFWD LQTVGTDADLLNEACVTTLIRKDGFKFWGSRTCSDDPLFQFENYTRTAQVLADTMAEAHLWAVDRPVTPTLIRDMIDGIK AKFRELKSAGLIIDGDCWYDESANDKETLKAGKLFIDYDYTPVPPLEDLTLRQRITDRYLANFAASVNS
Sequences:
>Translated_389_residues MGDYHHGVRVLEINEGTRVISTVSTAIIGMVCTAEDADASLFPLNTPVLITDVLAASGKAGKNGTLARSLLAIAEQAKPV TVVVRVAEGKDEAETTSNIIGGADENGKYTGMKALLAAQAELGVKPRILGVPGHDNLEVATALAGICQQLRAFGYISAYG CKTVSDAIKYRAGFSQRELMLIWPDFVNWNTTTNSSDIAYATARALGLRAKIDQETGWHKTLSNVGVNGVSGISASVFWD LQTVGTDADLLNEACVTTLIRKDGFKFWGSRTCSDDPLFQFENYTRTAQVLADTMAEAHLWAVDRPVTPTLIRDMIDGIK AKFRELKSAGLIIDGDCWYDESANDKETLKAGKLFIDYDYTPVPPLEDLTLRQRITDRYLANFAASVNS >Mature_388_residues GDYHHGVRVLEINEGTRVISTVSTAIIGMVCTAEDADASLFPLNTPVLITDVLAASGKAGKNGTLARSLLAIAEQAKPVT VVVRVAEGKDEAETTSNIIGGADENGKYTGMKALLAAQAELGVKPRILGVPGHDNLEVATALAGICQQLRAFGYISAYGC KTVSDAIKYRAGFSQRELMLIWPDFVNWNTTTNSSDIAYATARALGLRAKIDQETGWHKTLSNVGVNGVSGISASVFWDL QTVGTDADLLNEACVTTLIRKDGFKFWGSRTCSDDPLFQFENYTRTAQVLADTMAEAHLWAVDRPVTPTLIRDMIDGIKA KFRELKSAGLIIDGDCWYDESANDKETLKAGKLFIDYDYTPVPPLEDLTLRQRITDRYLANFAASVNS
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42138; Mature: 42007
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDYHHGVRVLEINEGTRVISTVSTAIIGMVCTAEDADASLFPLNTPVLITDVLAASGKA CCCCCCCEEEEEECCCCHHHHHHHHHHHHEEEECCCCCCEEEECCCCHHHHHHHHHCCCC GKNGTLARSLLAIAEQAKPVTVVVRVAEGKDEAETTSNIIGGADENGKYTGMKALLAAQA CCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH ELGVKPRILGVPGHDNLEVATALAGICQQLRAFGYISAYGCKTVSDAIKYRAGFSQRELM HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCEEE LIWPDFVNWNTTTNSSDIAYATARALGLRAKIDQETGWHKTLSNVGVNGVSGISASVFWD EEECCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCCEEEEEE LQTVGTDADLLNEACVTTLIRKDGFKFWGSRTCSDDPLFQFENYTRTAQVLADTMAEAHL HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHE WAVDRPVTPTLIRDMIDGIKAKFRELKSAGLIIDGDCWYDESANDKETLKAGKLFIDYDY EECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHCCEEEEECC TPVPPLEDLTLRQRITDRYLANFAASVNS CCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GDYHHGVRVLEINEGTRVISTVSTAIIGMVCTAEDADASLFPLNTPVLITDVLAASGKA CCCCCCEEEEEECCCCHHHHHHHHHHHHEEEECCCCCCEEEECCCCHHHHHHHHHCCCC GKNGTLARSLLAIAEQAKPVTVVVRVAEGKDEAETTSNIIGGADENGKYTGMKALLAAQA CCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH ELGVKPRILGVPGHDNLEVATALAGICQQLRAFGYISAYGCKTVSDAIKYRAGFSQRELM HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCEEE LIWPDFVNWNTTTNSSDIAYATARALGLRAKIDQETGWHKTLSNVGVNGVSGISASVFWD EEECCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCCEEEEEE LQTVGTDADLLNEACVTTLIRKDGFKFWGSRTCSDDPLFQFENYTRTAQVLADTMAEAHL HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHE WAVDRPVTPTLIRDMIDGIKAKFRELKSAGLIIDGDCWYDESANDKETLKAGKLFIDYDY EECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHCCEEEEECC TPVPPLEDLTLRQRITDRYLANFAASVNS CCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA