| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is cysJ
Identifier: 157369055
GI number: 157369055
Start: 905347
End: 907146
Strand: Direct
Name: cysJ
Synonym: Spro_0810
Alternate gene names: 157369055
Gene position: 905347-907146 (Clockwise)
Preceding gene: 157369053
Following gene: 157369056
Centisome position: 16.62
GC content: 58.89
Gene sequence:
>1800_bases ATGACGACTCAGGCACCTCCAACATCTTTGCTCCCGCTGACGCCCGAACAGCTGGCGCGCCTGCAGGCGGCGATTGGTGA ATATTCACCAACGCAGCTGGCGTGGCTGTCAGGTTATTTCTGGGGAATGGTTAATCAACAGCCTGGCAGCGTTGCCATTG CGCCGGTGGCTTCCGCTGCCGCCAGCATCACGGTGATCTCTGCTTCACAGACTGGCAATGCACGTCGCCTGGCGGAACAG CTGCGCGACGATCTGTTGGCCGCCAAGCTGAGCGTCACCCTGGTGAATGCCGGTGACTACAAGTTCAAGCAGATTGCCCA GGAACGCTTGCTGGTGATCGTTGCCTCCACACAGGGGGAAGGCGAGCCGGCGGAAGAGGCGGTTGCGCTGCATAAATTCC TGTTCTCGAAGAAGGCACCCAAGCTTAACGAAACCGCGTTTGCGGTCTTCGGGCTGGGGGATACTTCCTACGAAAACTTC TGTCAGTCGGGCAAAGACTTCGACGGCAAGCTGGCCGAACTGGGTGCCGAGCGCCTGGTCGAGCGGGTAGATGCCGACGT GGAATATCAGGAACTGGCCACGGCCTGGCGTAAACAGGTAGTGGAAGTGCTGAAAGCCCGTGCGCCGGCGGAAAATGCCG CACCGGGCGTGTTGGCCAGCGGCGCGGTTGACCTGCTCGATAGCAGCCCATACAGCAAAGAACAGCCGCTGACCGCGCAA CTGGCGGTGAAGCAAAAAATTACCGGCCGTGCGTCAGATAAAGACGTGCGCCATATCGAGATTGATCTGGGCGATTCGGG TCTGCGCTACCGACCGGGTGACGCGCTGGGCGTCTGGTTCGATAACGATCCTGCGCTGGTGGACGAACTGGTGCAACTGC TGTGGTTGAAAGGCGACGAGCCGGTAGAGGTCGAAGGTAAAACTCTGCCGCTGGCGCAAGCGTTGCGCAGCCATTTCGAA TTGACGCAGAACACTACGCCGATCGTCGACAAATACGCGGCGCTGTCGCGCGACGAGAAATTGATTGGCCTACTGGCAGA TAAAGCCGCGCTGCAGCATTACGCGCACAACACGCCGATTGTCGACATGGTGCGTCAGGCACCGGCCGATCTCAATGCCG AACAGTTGATTGGCCTGTTGCGCCCTCTGACGCCGCGCCTGTATTCCATCGCTTCGTCGCAGGCTGAGAACGAAAACGAA GTGCACGTTACCGTCGGCGTGGTGCGCTACGACATTGACGGTCGCGCTCGTGCCGGTGGCGCTTCCAGCTTCCTGGCCGA TCGCCTGGAAGAGGACGGTGATGTGCGGGTGTTCATCGAGCACAACGACAACTTCCGCCTGCCGGCCAACCCGGAAACGC CGGTGATCATGATTGGCCCTGGCACCGGCATTGCGCCGTTCCGCGCCTTTATGCAGCAACGTGACGCTGATGGCGCCGGC GGTAAGAATTGGCTGTTCTTCGGCAACCCGCACTTTACCGAAGATTTCCTGTATCAGGTCGAATGGCAGCGCTATGTGAA GGATGGCCTGCTGACTCGTATCGATCTGGCCTGGTCACGCGATCAACAACATAAAGTCTATGTTCAAGACAAACTGCGCG AACAGGGCGCGGAAGTGTGGCGTTGGATCCAGGAAGGCGCGCATATTTACGTCTGTGGCGATGCCAACCGCATGGCGAAG GACGTGGAAAACACATTACTGGAACTGGTGGCCGAGCACGGTGGTATGGATACCGAGCTGGCGGATGAATTTTTAAGTGA GCTGCGCCTTGAGCGCCGTTATCAGCGAGATGTTTACTGA
Upstream 100 bases:
>100_bases TCCTGATCTTTTCAGGACCGCAGACCGAACGAAAAAATAGCGGCTGACACTGGCGAGCACCTGGCTGGATAGGTGCCATG TATAGGAAATAAGTACTGCA
Downstream 100 bases:
>100_bases TGAGTGATAAACACCCGGGGCCTCTGGTGGTTGAAGGCAAATTGGCCGATGCCGAGCGTTTGAAGAAAGAAAGCAACTTC CTGCGCGGCACCATCGCTGA
Product: sulfite reductase subunit alpha
Products: NA
Alternate protein names: SiR-FP
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MTTQAPPTSLLPLTPEQLARLQAAIGEYSPTQLAWLSGYFWGMVNQQPGSVAIAPVASAAASITVISASQTGNARRLAEQ LRDDLLAAKLSVTLVNAGDYKFKQIAQERLLVIVASTQGEGEPAEEAVALHKFLFSKKAPKLNETAFAVFGLGDTSYENF CQSGKDFDGKLAELGAERLVERVDADVEYQELATAWRKQVVEVLKARAPAENAAPGVLASGAVDLLDSSPYSKEQPLTAQ LAVKQKITGRASDKDVRHIEIDLGDSGLRYRPGDALGVWFDNDPALVDELVQLLWLKGDEPVEVEGKTLPLAQALRSHFE LTQNTTPIVDKYAALSRDEKLIGLLADKAALQHYAHNTPIVDMVRQAPADLNAEQLIGLLRPLTPRLYSIASSQAENENE VHVTVGVVRYDIDGRARAGGASSFLADRLEEDGDVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRDADGAG GKNWLFFGNPHFTEDFLYQVEWQRYVKDGLLTRIDLAWSRDQQHKVYVQDKLREQGAEVWRWIQEGAHIYVCGDANRMAK DVENTLLELVAEHGGMDTELADEFLSELRLERRYQRDVY
Sequences:
>Translated_599_residues MTTQAPPTSLLPLTPEQLARLQAAIGEYSPTQLAWLSGYFWGMVNQQPGSVAIAPVASAAASITVISASQTGNARRLAEQ LRDDLLAAKLSVTLVNAGDYKFKQIAQERLLVIVASTQGEGEPAEEAVALHKFLFSKKAPKLNETAFAVFGLGDTSYENF CQSGKDFDGKLAELGAERLVERVDADVEYQELATAWRKQVVEVLKARAPAENAAPGVLASGAVDLLDSSPYSKEQPLTAQ LAVKQKITGRASDKDVRHIEIDLGDSGLRYRPGDALGVWFDNDPALVDELVQLLWLKGDEPVEVEGKTLPLAQALRSHFE LTQNTTPIVDKYAALSRDEKLIGLLADKAALQHYAHNTPIVDMVRQAPADLNAEQLIGLLRPLTPRLYSIASSQAENENE VHVTVGVVRYDIDGRARAGGASSFLADRLEEDGDVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRDADGAG GKNWLFFGNPHFTEDFLYQVEWQRYVKDGLLTRIDLAWSRDQQHKVYVQDKLREQGAEVWRWIQEGAHIYVCGDANRMAK DVENTLLELVAEHGGMDTELADEFLSELRLERRYQRDVY >Mature_598_residues TTQAPPTSLLPLTPEQLARLQAAIGEYSPTQLAWLSGYFWGMVNQQPGSVAIAPVASAAASITVISASQTGNARRLAEQL RDDLLAAKLSVTLVNAGDYKFKQIAQERLLVIVASTQGEGEPAEEAVALHKFLFSKKAPKLNETAFAVFGLGDTSYENFC QSGKDFDGKLAELGAERLVERVDADVEYQELATAWRKQVVEVLKARAPAENAAPGVLASGAVDLLDSSPYSKEQPLTAQL AVKQKITGRASDKDVRHIEIDLGDSGLRYRPGDALGVWFDNDPALVDELVQLLWLKGDEPVEVEGKTLPLAQALRSHFEL TQNTTPIVDKYAALSRDEKLIGLLADKAALQHYAHNTPIVDMVRQAPADLNAEQLIGLLRPLTPRLYSIASSQAENENEV HVTVGVVRYDIDGRARAGGASSFLADRLEEDGDVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRDADGAGG KNWLFFGNPHFTEDFLYQVEWQRYVKDGLLTRIDLAWSRDQQHKVYVQDKLREQGAEVWRWIQEGAHIYVCGDANRMAKD VENTLLELVAEHGGMDTELADEFLSELRLERRYQRDVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain
Homologues:
Organism=Homo sapiens, GI127139033, Length=613, Percent_Identity=30.8319738988581, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI24041029, Length=596, Percent_Identity=32.2147651006711, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI7657393, Length=597, Percent_Identity=30.6532663316583, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI221316709, Length=597, Percent_Identity=30.6532663316583, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI221316705, Length=606, Percent_Identity=30.1980198019802, Blast_Score=217, Evalue=3e-56, Organism=Homo sapiens, GI10835173, Length=645, Percent_Identity=28.6821705426357, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI221316707, Length=531, Percent_Identity=30.8851224105461, Blast_Score=196, Evalue=7e-50, Organism=Homo sapiens, GI40254422, Length=656, Percent_Identity=28.0487804878049, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI169790956, Length=437, Percent_Identity=28.8329519450801, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI169790958, Length=437, Percent_Identity=28.8329519450801, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1789123, Length=601, Percent_Identity=78.5357737104825, Blast_Score=960, Evalue=0.0, Organism=Caenorhabditis elegans, GI17554134, Length=636, Percent_Identity=30.0314465408805, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17566446, Length=576, Percent_Identity=24.6527777777778, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17531441, Length=397, Percent_Identity=27.455919395466, Blast_Score=91, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321832, Length=632, Percent_Identity=30.2215189873418, Blast_Score=206, Evalue=8e-54, Organism=Saccharomyces cerevisiae, GI6321143, Length=412, Percent_Identity=29.6116504854369, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6325305, Length=635, Percent_Identity=23.7795275590551, Blast_Score=129, Evalue=1e-30, Organism=Drosophila melanogaster, GI17137192, Length=609, Percent_Identity=29.3924466338259, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI24582192, Length=510, Percent_Identity=30.7843137254902, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI78706872, Length=524, Percent_Identity=32.824427480916, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24583543, Length=524, Percent_Identity=32.6335877862595, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI78706876, Length=524, Percent_Identity=32.6335877862595, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24660907, Length=598, Percent_Identity=26.9230769230769, Blast_Score=149, Evalue=8e-36, Organism=Drosophila melanogaster, GI24660903, Length=598, Percent_Identity=26.9230769230769, Blast_Score=149, Evalue=8e-36, Organism=Drosophila melanogaster, GI24647438, Length=427, Percent_Identity=22.9508196721311, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSJ_SERP5 (A8G9X6)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001477044.1 - ProteinModelPortal: A8G9X6 - SMR: A8G9X6 - STRING: A8G9X6 - GeneID: 5603583 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0810 - eggNOG: COG0369 - HOGENOM: HBG736048 - OMA: HVEIDLG - ProtClustDB: PRK10953 - BioCyc: SPRO399741:SPRO_0810-MONOMER - GO: GO:0006810 - HAMAP: MF_01541 - InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 - Gene3D: G3DSA:1.20.990.10 - PIRSF: PIRSF000207 - PRINTS: PR00369 - PRINTS: PR00371 - TIGRFAMs: TIGR01931
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1; SSF63380 Riboflavin_synthase_like_b-brl
EC number: =1.8.1.2
Molecular weight: Translated: 66202; Mature: 66071
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS51384 FAD_FR; PS50902 FLAVODOXIN_LIKE
Important sites: BINDING 489-489
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQAPPTSLLPLTPEQLARLQAAIGEYSPTQLAWLSGYFWGMVNQQPGSVAIAPVASAA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHCC ASITVISASQTGNARRLAEQLRDDLLAAKLSVTLVNAGDYKFKQIAQERLLVIVASTQGE EEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHCCEEEEEEECCCC GEPAEEAVALHKFLFSKKAPKLNETAFAVFGLGDTSYENFCQSGKDFDGKLAELGAERLV CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHH ERVDADVEYQELATAWRKQVVEVLKARAPAENAAPGVLASGAVDLLDSSPYSKEQPLTAQ HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHH LAVKQKITGRASDKDVRHIEIDLGDSGLRYRPGDALGVWFDNDPALVDELVQLLWLKGDE HHHHHHHCCCCCCCCCEEEEEEECCCCCEECCCCEEEEEECCCHHHHHHHHHHHHCCCCC PVEVEGKTLPLAQALRSHFELTQNTTPIVDKYAALSRDEKLIGLLADKAALQHYAHNTPI CEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH VDMVRQAPADLNAEQLIGLLRPLTPRLYSIASSQAENENEVHVTVGVVRYDIDGRARAGG HHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCC ASSFLADRLEEDGDVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRDADGAG HHHHHHHHHCCCCCEEEEEEECCCEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC GKNWLFFGNPHFTEDFLYQVEWQRYVKDGLLTRIDLAWSRDQQHKVYVQDKLREQGAEVW CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHH RWIQEGAHIYVCGDANRMAKDVENTLLELVAEHGGMDTELADEFLSELRLERRYQRDVY HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTQAPPTSLLPLTPEQLARLQAAIGEYSPTQLAWLSGYFWGMVNQQPGSVAIAPVASAA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHCC ASITVISASQTGNARRLAEQLRDDLLAAKLSVTLVNAGDYKFKQIAQERLLVIVASTQGE EEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHCCEEEEEEECCCC GEPAEEAVALHKFLFSKKAPKLNETAFAVFGLGDTSYENFCQSGKDFDGKLAELGAERLV CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHH ERVDADVEYQELATAWRKQVVEVLKARAPAENAAPGVLASGAVDLLDSSPYSKEQPLTAQ HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHH LAVKQKITGRASDKDVRHIEIDLGDSGLRYRPGDALGVWFDNDPALVDELVQLLWLKGDE HHHHHHHCCCCCCCCCEEEEEEECCCCCEECCCCEEEEEECCCHHHHHHHHHHHHCCCCC PVEVEGKTLPLAQALRSHFELTQNTTPIVDKYAALSRDEKLIGLLADKAALQHYAHNTPI CEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH VDMVRQAPADLNAEQLIGLLRPLTPRLYSIASSQAENENEVHVTVGVVRYDIDGRARAGG HHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCC ASSFLADRLEEDGDVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRDADGAG HHHHHHHHHCCCCCEEEEEEECCCEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC GKNWLFFGNPHFTEDFLYQVEWQRYVKDGLLTRIDLAWSRDQQHKVYVQDKLREQGAEVW CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHH RWIQEGAHIYVCGDANRMAKDVENTLLELVAEHGGMDTELADEFLSELRLERRYQRDVY HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA