Click here to switch to the map view.

The map label for this gene is ygcA [C]

Identifier: 157369036

GI number: 157369036

Start: 882633

End: 882803

Strand: Direct

Name: ygcA [C]

Synonym: Spro_0791

Alternate gene names: 157369036

Gene position: 882633-882803 (Clockwise)

Preceding gene: 157369034

Following gene: 157369037

Centisome position: 16.2

GC content: 55.56

Gene sequence:

>171_bases
ATGGTGGGGCAGGCCCTTGAATGGTTCGCTATTAAACCCAATGATCGGGTATTGGATCTGTTCTGCGGTCAGGGCCATTC
TGCCCAGCCGTTGGCGCGACGCGCCGCTGGCATAGAGGTGTTGCCACACCGCGAGCGAATGGGCAATATAATGCACATAA
GAATAGGCTGA

Upstream 100 bases:

>100_bases
AAAACTGTGCGGTGAAACGCTGTATTATCAGGTCGACGGACTACGCTTAGACTGCCGTCCGTGTGACTTTATTCATATAA
ATAGCTTATTAAATCAGTCA

Downstream 100 bases:

>100_bases
GTTACGCCGGCTTCTTATCGTCTTGCGCGTGTGTGGATATTGGAGCGGTTTTCGCATACGGGGCATCTTGAGTCAATGGC
GCTGTTGATTAACGGTTTTG

Product: RNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MVGQALEWFAIKPNDRVLDLFCGQGHSAQPLARRAAGIEVLPHRERMGNIMHIRIG

Sequences:

>Translated_56_residues
MVGQALEWFAIKPNDRVLDLFCGQGHSAQPLARRAAGIEVLPHRERMGNIMHIRIG
>Mature_56_residues
MVGQALEWFAIKPNDRVLDLFCGQGHSAQPLARRAAGIEVLPHRERMGNIMHIRIG

Specific function: Could Be A 23s rRNA (Uracil-5-)-Methyltransferase. [C]

COG id: COG2265

COG function: function code J; SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6278; Mature: 6278

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGQALEWFAIKPNDRVLDLFCGQGHSAQPLARRAAGIEVLPHRERMGNIMHIRIG
CCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHCCCCEECCCHHHCCCEEEEEEC
>Mature Secondary Structure
MVGQALEWFAIKPNDRVLDLFCGQGHSAQPLARRAAGIEVLPHRERMGNIMHIRIG
CCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHCCCCEECCCHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA