| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ampE [H]
Identifier: 157369025
GI number: 157369025
Start: 869452
End: 870306
Strand: Direct
Name: ampE [H]
Synonym: Spro_0780
Alternate gene names: 157369025
Gene position: 869452-870306 (Clockwise)
Preceding gene: 157369020
Following gene: 157369027
Centisome position: 15.96
GC content: 58.25
Gene sequence:
>855_bases ATGACGCTGTTTACGCTGTTACTGGTTCTGGCGTGGGAACGTTTGTTCAAGCTGGGTGAGCATTGGCAGTTGGACCATCG GCTGGAGGTGGTGTTTCATCGGCTGCATCGGTTCTCGCTGGCGCAGACGTTGCTGATGACCCTGGCCTGGATGGTGGTGG TCGGGGGCATTCTGTGGCTGTCTCAAGGGCTGTTTTTCGGCGTAGTGACGCTGTTGCTGTGGATTATCATTGATTTGCTG TGTGTGGGTGCGGGCATCAAGCGTAAACACTATCGCGCCTATCTGAAAGCGGCGCGGCAGGGAGATGCTCATGCCAGCGA CCAGATGGCGGAGGAGCTGGCACTGATCCACGGTTTGCCGGTGGATTGCAGCGAAGAGCTGCGTCTGCGTGAACTGCAAA ATGCGTTGCTGTGGATTAACTTCCGTTATTATCTGGCACCGCTGTTCTGGTTCGTGGTCTGCGGGCCTTATGGGCCGATT GCGCTGGCGGGCTACTCCTTCCTGCGTGCTTACCAGACCTGGTTGGCGCGCCATAATACCCCGCTGGAGCGTTCGCAGTC GGGCATCGATCATCTGTTGAACTGGCTGGACTGGATCCCGGTGCGTCTGGCCGGTGTGGCTTACGCCCTGTTTGGACATG GTGAGAGAGCACTGCCGGCATGGTTTGCATCGCTGGGCGATCTCCATTCTTCGCAGTATCAGGTGCTGACGCGGCTGGCA CAGTTCTCACTGGCGCGTGATCCCCATATGGATCCGGTGCAGACCCCGCGGGCGGCGGTAACCCTGGCACGTAAGGTGAC GATGATTATCGTGGTGGTGGTAGCCCTGCTGACGATTTACGGTACTTTGCTCTGA
Upstream 100 bases:
>100_bases CGGCGATATTTTACCGGGATTTAAATCTGGCATCTCTGGAACAACCCGGCAAGCCCGATGACGCTATGCTTGGAACAATG GAAAGGGAGAGGAGTCGCTA
Downstream 100 bases:
>100_bases CGGCGAAATTTGGAAATAAAAACGGGCGCTGAGCGCCCGTTTTTATTGGATAGCCGAAACTTACAGTTTGGCGAAGCAGC GGCGCGCGGCATCTATAGTG
Product: regulatory protein AmpE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTLFTLLLVLAWERLFKLGEHWQLDHRLEVVFHRLHRFSLAQTLLMTLAWMVVVGGILWLSQGLFFGVVTLLLWIIIDLL CVGAGIKRKHYRAYLKAARQGDAHASDQMAEELALIHGLPVDCSEELRLRELQNALLWINFRYYLAPLFWFVVCGPYGPI ALAGYSFLRAYQTWLARHNTPLERSQSGIDHLLNWLDWIPVRLAGVAYALFGHGERALPAWFASLGDLHSSQYQVLTRLA QFSLARDPHMDPVQTPRAAVTLARKVTMIIVVVVALLTIYGTLL
Sequences:
>Translated_284_residues MTLFTLLLVLAWERLFKLGEHWQLDHRLEVVFHRLHRFSLAQTLLMTLAWMVVVGGILWLSQGLFFGVVTLLLWIIIDLL CVGAGIKRKHYRAYLKAARQGDAHASDQMAEELALIHGLPVDCSEELRLRELQNALLWINFRYYLAPLFWFVVCGPYGPI ALAGYSFLRAYQTWLARHNTPLERSQSGIDHLLNWLDWIPVRLAGVAYALFGHGERALPAWFASLGDLHSSQYQVLTRLA QFSLARDPHMDPVQTPRAAVTLARKVTMIIVVVVALLTIYGTLL >Mature_283_residues TLFTLLLVLAWERLFKLGEHWQLDHRLEVVFHRLHRFSLAQTLLMTLAWMVVVGGILWLSQGLFFGVVTLLLWIIIDLLC VGAGIKRKHYRAYLKAARQGDAHASDQMAEELALIHGLPVDCSEELRLRELQNALLWINFRYYLAPLFWFVVCGPYGPIA LAGYSFLRAYQTWLARHNTPLERSQSGIDHLLNWLDWIPVRLAGVAYALFGHGERALPAWFASLGDLHSSQYQVLTRLAQ FSLARDPHMDPVQTPRAAVTLARKVTMIIVVVVALLTIYGTLL
Specific function: Putative signaling protein in beta-lactamase regulation. AmpE seems not to act as a direct sensor for beta-lactams [H]
COG id: COG3725
COG function: function code V; Membrane protein required for beta-lactamase induction
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786301, Length=284, Percent_Identity=65.8450704225352, Blast_Score=365, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004485 [H]
Pfam domain/function: PF03186 CobD_Cbib [H]
EC number: NA
Molecular weight: Translated: 32380; Mature: 32248
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFTLLLVLAWERLFKLGEHWQLDHRLEVVFHRLHRFSLAQTLLMTLAWMVVVGGILWL CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQGLFFGVVTLLLWIIIDLLCVGAGIKRKHYRAYLKAARQGDAHASDQMAEELALIHGLP HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC VDCSEELRLRELQNALLWINFRYYLAPLFWFVVCGPYGPIALAGYSFLRAYQTWLARHNT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC PLERSQSGIDHLLNWLDWIPVRLAGVAYALFGHGERALPAWFASLGDLHSSQYQVLTRLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHH QFSLARDPHMDPVQTPRAAVTLARKVTMIIVVVVALLTIYGTLL HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLFTLLLVLAWERLFKLGEHWQLDHRLEVVFHRLHRFSLAQTLLMTLAWMVVVGGILWL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQGLFFGVVTLLLWIIIDLLCVGAGIKRKHYRAYLKAARQGDAHASDQMAEELALIHGLP HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC VDCSEELRLRELQNALLWINFRYYLAPLFWFVVCGPYGPIALAGYSFLRAYQTWLARHNT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC PLERSQSGIDHLLNWLDWIPVRLAGVAYALFGHGERALPAWFASLGDLHSSQYQVLTRLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHH QFSLARDPHMDPVQTPRAAVTLARKVTMIIVVVVALLTIYGTLL HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2691840; 2607970; 9278503 [H]