| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is leuO [H]
Identifier: 157368991
GI number: 157368991
Start: 831312
End: 832259
Strand: Direct
Name: leuO [H]
Synonym: Spro_0746
Alternate gene names: 157368991
Gene position: 831312-832259 (Clockwise)
Preceding gene: 157368986
Following gene: 157368992
Centisome position: 15.26
GC content: 47.36
Gene sequence:
>948_bases ATGTCGGAATGTAATTCAGGAGTTGTTATCGATAAAGAAACCAGCGAACTGCATTTGCGCAGCGTCGATCTGAATTTGCT CACCGTGTTTGATGCCGTTATGCAGATGCAGAATATTACCCGGGCAGCGAGCTTTTTGGGGATGTCGCAGCCGGCGGTGA GCAACGCCGTTGCACGTTTAAAGCTGATGTTTAATGACGAGCTGTTCGTCCGCTGTGGGCGTGGGATCCAGCCTACGGTG CGGGCTAAGCAGCTGTTTGGCCCGGTTAGGCAGGCGTTGCAGTTGGTGCAAAATGAGTTGCCCGGAGCGGAGTTTGAACC CTTTAGCAGTGAGCGAGCTTTCTCTATCGCCATTTGCAGTCCGCTTGATTTGCGTTTGGGGGCTACCATAATCAATCACA TGAGGGAAATAGCGCCTCATACCCATTTGAAAATAAAGTCATATATAACCAATAACATCGATAACCAATTACGCTACCAG GAGGTTGAGTTCGTTGTTGGCTATGCCAGCTTTGAGTCTTCAGAGTTTAAAAGTATGGCGCTTTTTGATGACGAGCTGGT GCTGGTATTTTCCAGGAAACATCCGAGGATAGAAAAATCCATTACGCCGGAACAAATCCTGGCGGAGCAACACGCGGTGG TTTCACTCGAGAGTTTTTATTCTTTCAGTAAACCCTACTATATAGAAGAAGCTATGCAACGAGTCGTGGATCAACAATGT ACTGATTTATACAGCGTGCTGAATATAGTATCCAGTACTGACATGATTGCCATTGTTCCGGCCTGGCTGGCTCGACAGCA GGCTGAATCCTTAAAGCTGCGTTTTATTCCTTTACCCTGGAATGAAAACAAGGTGACCTGTTATCTGTCCTGGCATGAGT CGGCTGAACGGGATAAGGGACATCAATGGATGAAACTGATGCTTGGCCAGTCTGAGTTGACTGAATAA
Upstream 100 bases:
>100_bases GAGAGATAACTAATTCTACCGTGTGAAATCAAGATGGCGCTGTTTTGTCATTTTTATTGCGCGTGGGGAATTATCTACAC AGGACTTAGTGGAGTGGGAT
Downstream 100 bases:
>100_bases ATCAGCCTATTATTACCCCCCCCGAGGTGGTGGTTTTCCATAGGGGGAATAATTTTCCCGTGCTTTGGTTAAGAATTATC TTGGGTTTATCTAAGATATA
Product: leucine transcriptional activator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSECNSGVVIDKETSELHLRSVDLNLLTVFDAVMQMQNITRAASFLGMSQPAVSNAVARLKLMFNDELFVRCGRGIQPTV RAKQLFGPVRQALQLVQNELPGAEFEPFSSERAFSIAICSPLDLRLGATIINHMREIAPHTHLKIKSYITNNIDNQLRYQ EVEFVVGYASFESSEFKSMALFDDELVLVFSRKHPRIEKSITPEQILAEQHAVVSLESFYSFSKPYYIEEAMQRVVDQQC TDLYSVLNIVSSTDMIAIVPAWLARQQAESLKLRFIPLPWNENKVTCYLSWHESAERDKGHQWMKLMLGQSELTE
Sequences:
>Translated_315_residues MSECNSGVVIDKETSELHLRSVDLNLLTVFDAVMQMQNITRAASFLGMSQPAVSNAVARLKLMFNDELFVRCGRGIQPTV RAKQLFGPVRQALQLVQNELPGAEFEPFSSERAFSIAICSPLDLRLGATIINHMREIAPHTHLKIKSYITNNIDNQLRYQ EVEFVVGYASFESSEFKSMALFDDELVLVFSRKHPRIEKSITPEQILAEQHAVVSLESFYSFSKPYYIEEAMQRVVDQQC TDLYSVLNIVSSTDMIAIVPAWLARQQAESLKLRFIPLPWNENKVTCYLSWHESAERDKGHQWMKLMLGQSELTE >Mature_314_residues SECNSGVVIDKETSELHLRSVDLNLLTVFDAVMQMQNITRAASFLGMSQPAVSNAVARLKLMFNDELFVRCGRGIQPTVR AKQLFGPVRQALQLVQNELPGAEFEPFSSERAFSIAICSPLDLRLGATIINHMREIAPHTHLKIKSYITNNIDNQLRYQE VEFVVGYASFESSEFKSMALFDDELVLVFSRKHPRIEKSITPEQILAEQHAVVSLESFYSFSKPYYIEEAMQRVVDQQCT DLYSVLNIVSSTDMIAIVPAWLARQQAESLKLRFIPLPWNENKVTCYLSWHESAERDKGHQWMKLMLGQSELTE
Specific function: Unknown
COG id: COG0583
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87081684, Length=296, Percent_Identity=61.1486486486487, Blast_Score=364, Evalue=1e-102, Organism=Escherichia coli, GI1786820, Length=285, Percent_Identity=27.0175438596491, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87081766, Length=285, Percent_Identity=24.9122807017544, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788887, Length=279, Percent_Identity=24.3727598566308, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 35927; Mature: 35795
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSECNSGVVIDKETSELHLRSVDLNLLTVFDAVMQMQNITRAASFLGMSQPAVSNAVARL CCCCCCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH KLMFNDELFVRCGRGIQPTVRAKQLFGPVRQALQLVQNELPGAEFEPFSSERAFSIAICS HHEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC PLDLRLGATIINHMREIAPHTHLKIKSYITNNIDNQLRYQEVEFVVGYASFESSEFKSMA CCCHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCHHHHHHHEEEEEEEECCCCCCCCEEE LFDDELVLVFSRKHPRIEKSITPEQILAEQHAVVSLESFYSFSKPYYIEEAMQRVVDQQC EECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEEHHHHHCCCCCHHHHHHHHHHHHHHH TDLYSVLNIVSSTDMIAIVPAWLARQQAESLKLRFIPLPWNENKVTCYLSWHESAERDKG HHHHHHHHHHCCCCHHEEHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCCCCCH HQWMKLMLGQSELTE HHHHHHHHCHHHCCC >Mature Secondary Structure SECNSGVVIDKETSELHLRSVDLNLLTVFDAVMQMQNITRAASFLGMSQPAVSNAVARL CCCCCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH KLMFNDELFVRCGRGIQPTVRAKQLFGPVRQALQLVQNELPGAEFEPFSSERAFSIAICS HHEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC PLDLRLGATIINHMREIAPHTHLKIKSYITNNIDNQLRYQEVEFVVGYASFESSEFKSMA CCCHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCHHHHHHHEEEEEEEECCCCCCCCEEE LFDDELVLVFSRKHPRIEKSITPEQILAEQHAVVSLESFYSFSKPYYIEEAMQRVVDQQC EECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEEHHHHHCCCCCHHHHHHHHHHHHHHH TDLYSVLNIVSSTDMIAIVPAWLARQQAESLKLRFIPLPWNENKVTCYLSWHESAERDKG HHHHHHHHHHCCCCHHEEHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCCCCCH HQWMKLMLGQSELTE HHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3413113; 1630901; 9278503; 3519576 [H]