| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yflS [H]
Identifier: 157368986
GI number: 157368986
Start: 824227
End: 825699
Strand: Direct
Name: yflS [H]
Synonym: Spro_0741
Alternate gene names: 157368986
Gene position: 824227-825699 (Clockwise)
Preceding gene: 157368985
Following gene: 157368991
Centisome position: 15.13
GC content: 57.98
Gene sequence:
>1473_bases ATGGATAAACTAACGCCGCTCAAGCCCGTCCCTTCTCTGTGTGCCGTCGCCGCTGCTTTACTCATCTGGTTTGTGATCCC GGTGCCTGAAGGCGTGGCACCCAATGCCTGGCATTTGCTGGCGCTGTTTATCGGCACCATCATCGCCATCATCGGCAAAG CGATGCCGATTGGTGCCGTTTCGGTGGTGGCGATCGCGCTGGTGGCGGTAACCGGCGTCACCAATCCCGGCAAACCCGGT GCTGCGCTCAATGACGCGCTCAGCGGATTTTCCAACCAGTTGATCTGGCTGATTGGTTTTTCGATCATGATCTCACTCAG CCTGAACAAAACCGGGCTGGGGGCGCGCATCGGTTATTACTTCATCTCGCTGTTTGGTAAAAAGACGCTGGGCATTGCTT ATGCATTGACGCTGGCGGAAACTACCCTGGCGCCGGTGACCCCAAGTAATACCGCGCGTGGCGGCGGGATTATCCACCCG ATCATGAAGTCGATTGCCGACAGCTTCGGCTCCAAACCCGAGCTCAATACCTCCGGCAAGATTGGCCGCTATCTGTCGCT GGTCAATTACAATATCAACCCGATCACTTCGGCGATGTTTATCACCGCTACCGCGCCGAACCCGTTGATCGTCAGCCTGA TTGCCAAGGGCACTCATGGCAACTTTGAGCTGTCCTGGTCCATGTGGGCGGTGGCGGCACTGGTGCCTGGGCTGTGTTCG CTGATTGTCATGCCCTTGGTGATTTATCTGCTCTACCCGCCAGAGGTGAAAAGCACCCCGGACGCGCCGCGTTTCGCTCG TGAAAAGCTGCAGGCTCTGGGGCCGGTAACGCTGCCGGAGAAAATCACGCTGGCGGTGTTTGCCCTGCTGTTGGTGCTGT GGGCTGGTATTCCGGCGATGATCTTCGGCCCGGCACTGGCGGTTAACCCAACCACGGCGGCGCTGATTGGTCTGGCGGTG TTGCTCGCAACCGGGGTATTGAGCTGGGAAGATGTGCTCAGGCACAAGGGGGCCTGGGACACGGTGGTGTGGTTCTCCGC GTTGGTGATGATGGCCAGCTTCCTCGGCAAGTTGGGGCTGATTGGTTGGCTGTCGCAAACCGTGGGCAACGGTATTGATC ATATGGGAATGAGTTGGGTTGGCGGCACCATCCTGTTGACCCTTATCTATCTGTATTCGCATTACTTCTTTGCCAGCACC ACCGCACACGTTACCGCCATGTTTGCCGCGTTCTTTGCCGCCGGCATTGCGCTGGGTGCTCCACCCGCGTTGCTGGGCTT GATCCTGGCGTTCTCTTCCTCGCTGATGATGTCGCTGACCCACTACGGTACCGGCACGGCACCGATTGTCTTTGGCTCCG GCTATGCGACCTTGGGTGAGTGGTGGAAAGCCGGTTTTGTGATGAGCGTGGTCAACCTGCTGATTTGGATATTGATTGGT GGAGCGTGGTGGAAGTGGCTGGGCTACTGGTAA
Upstream 100 bases:
>100_bases TACGCCCGCCCCCCAAGCTGAACGGACCCGGAACGCGATAAGTGCGTTCCCGCCCATCTTGCTGCCAAGATGCCGATCCG TTTAGAAAAGTGGGTATGTT
Downstream 100 bases:
>100_bases GCGGTTATTAATAATAAAAAAACACCCGCCAGGTGGCGGGTGATTAATATCAGTTCAGGAAGGCGGGTTGCTGCGCCTCG TAGCGGGAAATATCCGCTTC
Product: anion transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MDKLTPLKPVPSLCAVAAALLIWFVIPVPEGVAPNAWHLLALFIGTIIAIIGKAMPIGAVSVVAIALVAVTGVTNPGKPG AALNDALSGFSNQLIWLIGFSIMISLSLNKTGLGARIGYYFISLFGKKTLGIAYALTLAETTLAPVTPSNTARGGGIIHP IMKSIADSFGSKPELNTSGKIGRYLSLVNYNINPITSAMFITATAPNPLIVSLIAKGTHGNFELSWSMWAVAALVPGLCS LIVMPLVIYLLYPPEVKSTPDAPRFAREKLQALGPVTLPEKITLAVFALLLVLWAGIPAMIFGPALAVNPTTAALIGLAV LLATGVLSWEDVLRHKGAWDTVVWFSALVMMASFLGKLGLIGWLSQTVGNGIDHMGMSWVGGTILLTLIYLYSHYFFAST TAHVTAMFAAFFAAGIALGAPPALLGLILAFSSSLMMSLTHYGTGTAPIVFGSGYATLGEWWKAGFVMSVVNLLIWILIG GAWWKWLGYW
Sequences:
>Translated_490_residues MDKLTPLKPVPSLCAVAAALLIWFVIPVPEGVAPNAWHLLALFIGTIIAIIGKAMPIGAVSVVAIALVAVTGVTNPGKPG AALNDALSGFSNQLIWLIGFSIMISLSLNKTGLGARIGYYFISLFGKKTLGIAYALTLAETTLAPVTPSNTARGGGIIHP IMKSIADSFGSKPELNTSGKIGRYLSLVNYNINPITSAMFITATAPNPLIVSLIAKGTHGNFELSWSMWAVAALVPGLCS LIVMPLVIYLLYPPEVKSTPDAPRFAREKLQALGPVTLPEKITLAVFALLLVLWAGIPAMIFGPALAVNPTTAALIGLAV LLATGVLSWEDVLRHKGAWDTVVWFSALVMMASFLGKLGLIGWLSQTVGNGIDHMGMSWVGGTILLTLIYLYSHYFFAST TAHVTAMFAAFFAAGIALGAPPALLGLILAFSSSLMMSLTHYGTGTAPIVFGSGYATLGEWWKAGFVMSVVNLLIWILIG GAWWKWLGYW >Mature_490_residues MDKLTPLKPVPSLCAVAAALLIWFVIPVPEGVAPNAWHLLALFIGTIIAIIGKAMPIGAVSVVAIALVAVTGVTNPGKPG AALNDALSGFSNQLIWLIGFSIMISLSLNKTGLGARIGYYFISLFGKKTLGIAYALTLAETTLAPVTPSNTARGGGIIHP IMKSIADSFGSKPELNTSGKIGRYLSLVNYNINPITSAMFITATAPNPLIVSLIAKGTHGNFELSWSMWAVAALVPGLCS LIVMPLVIYLLYPPEVKSTPDAPRFAREKLQALGPVTLPEKITLAVFALLLVLWAGIPAMIFGPALAVNPTTAALIGLAV LLATGVLSWEDVLRHKGAWDTVVWFSALVMMASFLGKLGLIGWLSQTVGNGIDHMGMSWVGGTILLTLIYLYSHYFFAST TAHVTAMFAAFFAAGIALGAPPALLGLILAFSSSLMMSLTHYGTGTAPIVFGSGYATLGEWWKAGFVMSVVNLLIWILIG GAWWKWLGYW
Specific function: Might be a malate transporter [H]
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family [H]
Homologues:
Organism=Escherichia coli, GI1786986, Length=467, Percent_Identity=36.6167023554604, Blast_Score=285, Evalue=4e-78, Organism=Escherichia coli, GI1786829, Length=479, Percent_Identity=31.9415448851775, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI1789444, Length=474, Percent_Identity=33.3333333333333, Blast_Score=243, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001898 [H]
Pfam domain/function: PF00939 Na_sulph_symp [H]
EC number: NA
Molecular weight: Translated: 51824; Mature: 51824
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLTPLKPVPSLCAVAAALLIWFVIPVPEGVAPNAWHLLALFIGTIIAIIGKAMPIGAV CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH SVVAIALVAVTGVTNPGKPGAALNDALSGFSNQLIWLIGFSIMISLSLNKTGLGARIGYY HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH FISLFGKKTLGIAYALTLAETTLAPVTPSNTARGGGIIHPIMKSIADSFGSKPELNTSGK HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC IGRYLSLVNYNINPITSAMFITATAPNPLIVSLIAKGTHGNFELSWSMWAVAALVPGLCS HHHHHHHHCCCCCCCCCEEEEEECCCCCEEEHEECCCCCCCEEEHHHHHHHHHHHHHHHH LIVMPLVIYLLYPPEVKSTPDAPRFAREKLQALGPVTLPEKITLAVFALLLVLWAGIPAM HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHH IFGPALAVNPTTAALIGLAVLLATGVLSWEDVLRHKGAWDTVVWFSALVMMASFLGKLGL HHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IGWLSQTVGNGIDHMGMSWVGGTILLTLIYLYSHYFFASTTAHVTAMFAAFFAAGIALGA HHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPALLGLILAFSSSLMMSLTHYGTGTAPIVFGSGYATLGEWWKAGFVMSVVNLLIWILIG CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH GAWWKWLGYW HHHHHHHCCC >Mature Secondary Structure MDKLTPLKPVPSLCAVAAALLIWFVIPVPEGVAPNAWHLLALFIGTIIAIIGKAMPIGAV CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH SVVAIALVAVTGVTNPGKPGAALNDALSGFSNQLIWLIGFSIMISLSLNKTGLGARIGYY HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH FISLFGKKTLGIAYALTLAETTLAPVTPSNTARGGGIIHPIMKSIADSFGSKPELNTSGK HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC IGRYLSLVNYNINPITSAMFITATAPNPLIVSLIAKGTHGNFELSWSMWAVAALVPGLCS HHHHHHHHCCCCCCCCCEEEEEECCCCCEEEHEECCCCCCCEEEHHHHHHHHHHHHHHHH LIVMPLVIYLLYPPEVKSTPDAPRFAREKLQALGPVTLPEKITLAVFALLLVLWAGIPAM HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHH IFGPALAVNPTTAALIGLAVLLATGVLSWEDVLRHKGAWDTVVWFSALVMMASFLGKLGL HHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IGWLSQTVGNGIDHMGMSWVGGTILLTLIYLYSHYFFASTTAHVTAMFAAFFAAGIALGA HHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPALLGLILAFSSSLMMSLTHYGTGTAPIVFGSGYATLGEWWKAGFVMSVVNLLIWILIG CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH GAWWKWLGYW HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377; 12949159 [H]