| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is nhaA [H]
Identifier: 157368939
GI number: 157368939
Start: 765849
End: 767045
Strand: Direct
Name: nhaA [H]
Synonym: Spro_0694
Alternate gene names: 157368939
Gene position: 765849-767045 (Clockwise)
Preceding gene: 157368938
Following gene: 157368940
Centisome position: 14.06
GC content: 56.22
Gene sequence:
>1197_bases GTGCCTTGCGCTGCTCTGGAGAGACGTATTGTGACCAACATCATTCGTCAATTTTTACGTCAGGAAGCCGCGGGCGGCAT TATCCTGATCGTAGCCGCGATTATCGCGTTGATCATGGCCAATACCCCAGCCCAGGGGATTTATCACGCCTTCCTCAATT TGCCTGTGATGGTGAAAGTGTCCTCACTGGAGATTGCCAAGCCACTGCTGTTGTGGATTAACGACGGCCTGATGGCGATC TTTTTCCTGGTGGTCGGGCTGGAGGTCAAGCGCGAGCTGATGCAAGGTTCATTGGCCGGGCGTGACAAGGCCGTGTTCCC GGCGATCGCCGCACTGGGCGGCATGCTGGCACCGGCATTGATTTACCTGATGTTCAACGGGGCGGACGAGGTTACTCGTC AGGGATGGGCGATCCCGGCGGCAACCGATATTGCCTTTGCCCTCGGAGTGATGGCGCTATTGGGTAACCGCGTGCCGACC AGCCTGAAGGTGTTCCTGTTGGCGCTGGCGATCATCGATGACCTGGGTGTCATCGTGATTATCGCATTGTTCTATACCCA CGAAGTCTCGATGGCGGCATTGGGCGTGGCAGCAGCCTCTATTGCCGTGCTGGCGTTTATGAACTGGCGCGGTGTGGGCA AAACCTCGCTTTATATGATTGTCGGTCTGGTACTGTGGGTGGCTATCCTCAAGTCCGGGGTACATGCGACGCTGGCCGGG GTTATTATCGGCTTTATGATCCCGCTGAACGTGAAGAAAGGGCCGTCGCCGTCAGAGACGCTGGAGCATGAACTGCATCC GTGGGTGGCATTCCTGATACTGCCGCTGTTTGCCTTTGCCAACGCCGGGGTTTCATTACAAGGCGTGTCACTGAGCGGGC TGACCTCCCTGTTGCCGGTGGGCATTGCGGCAGGCCTGTTTATCGGTAAGCCGTTGGGCATCTTCACCTTTAGCCTGTTG GCAGTGAAGCTGGGCATTGCGAGGCTACCTGAAGGAATTGGTTTCAAACAGGTGTTTGCCGTTTCCGTGCTCTGTGGTAT TGGTTTCACCATGTCGATATTTATCGCTTCGCTGGCCTTTGGCGATGCGGATGTTGTACTGAGCACCTATTCGCGACTGG GGATCCTGATTGGGTCAACCACGGCGGCGGTGGTCGGGTATGGTCTGTTACGCATGTCGTTACCACGAGTTAGATAA
Upstream 100 bases:
>100_bases ATAGATCGGTTTTTACGATGTTTTAAGCATTTATAAACGTATTTTATCGAAGTGATTCGGCGTCTATACTCATTCCATTA CTTTGTCTGCAGGGCCGTCT
Downstream 100 bases:
>100_bases CTCTTTTAGGGGATCCCCTGTTCGTGGGGACTCACTACAATACAATAGCTGGTCGGAGCTGCGCAGGATAAAATATGCGC AGCTTCGGCCATTCTGTTTG
Product: pH-dependent sodium/proton antiporter
Products: Na (I) [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: Sodium/proton antiporter nhaA [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MPCAALERRIVTNIIRQFLRQEAAGGIILIVAAIIALIMANTPAQGIYHAFLNLPVMVKVSSLEIAKPLLLWINDGLMAI FFLVVGLEVKRELMQGSLAGRDKAVFPAIAALGGMLAPALIYLMFNGADEVTRQGWAIPAATDIAFALGVMALLGNRVPT SLKVFLLALAIIDDLGVIVIIALFYTHEVSMAALGVAAASIAVLAFMNWRGVGKTSLYMIVGLVLWVAILKSGVHATLAG VIIGFMIPLNVKKGPSPSETLEHELHPWVAFLILPLFAFANAGVSLQGVSLSGLTSLLPVGIAAGLFIGKPLGIFTFSLL AVKLGIARLPEGIGFKQVFAVSVLCGIGFTMSIFIASLAFGDADVVLSTYSRLGILIGSTTAAVVGYGLLRMSLPRVR
Sequences:
>Translated_398_residues MPCAALERRIVTNIIRQFLRQEAAGGIILIVAAIIALIMANTPAQGIYHAFLNLPVMVKVSSLEIAKPLLLWINDGLMAI FFLVVGLEVKRELMQGSLAGRDKAVFPAIAALGGMLAPALIYLMFNGADEVTRQGWAIPAATDIAFALGVMALLGNRVPT SLKVFLLALAIIDDLGVIVIIALFYTHEVSMAALGVAAASIAVLAFMNWRGVGKTSLYMIVGLVLWVAILKSGVHATLAG VIIGFMIPLNVKKGPSPSETLEHELHPWVAFLILPLFAFANAGVSLQGVSLSGLTSLLPVGIAAGLFIGKPLGIFTFSLL AVKLGIARLPEGIGFKQVFAVSVLCGIGFTMSIFIASLAFGDADVVLSTYSRLGILIGSTTAAVVGYGLLRMSLPRVR >Mature_397_residues PCAALERRIVTNIIRQFLRQEAAGGIILIVAAIIALIMANTPAQGIYHAFLNLPVMVKVSSLEIAKPLLLWINDGLMAIF FLVVGLEVKRELMQGSLAGRDKAVFPAIAALGGMLAPALIYLMFNGADEVTRQGWAIPAATDIAFALGVMALLGNRVPTS LKVFLLALAIIDDLGVIVIIALFYTHEVSMAALGVAAASIAVLAFMNWRGVGKTSLYMIVGLVLWVAILKSGVHATLAGV IIGFMIPLNVKKGPSPSETLEHELHPWVAFLILPLFAFANAGVSLQGVSLSGLTSLLPVGIAAGLFIGKPLGIFTFSLLA VKLGIARLPEGIGFKQVFAVSVLCGIGFTMSIFIASLAFGDADVVLSTYSRLGILIGSTTAAVVGYGLLRMSLPRVR
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG3004
COG function: function code P; Na+/H+ antiporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nhaA Na(+)/H(+) (TC 2.A.33) antiporter family [H]
Homologues:
Organism=Escherichia coli, GI1786201, Length=381, Percent_Identity=67.1916010498688, Blast_Score=465, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023171 - InterPro: IPR004670 [H]
Pfam domain/function: PF06965 Na_H_antiport_1 [H]
EC number: NA
Molecular weight: Translated: 41930; Mature: 41799
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCAALERRIVTNIIRQFLRQEAAGGIILIVAAIIALIMANTPAQGIYHAFLNLPVMVKV CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEE SSLEIAKPLLLWINDGLMAIFFLVVGLEVKRELMQGSLAGRDKAVFPAIAALGGMLAPAL CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH IYLMFNGADEVTRQGWAIPAATDIAFALGVMALLGNRVPTSLKVFLLALAIIDDLGVIVI HHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IALFYTHEVSMAALGVAAASIAVLAFMNWRGVGKTSLYMIVGLVLWVAILKSGVHATLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH VIIGFMIPLNVKKGPSPSETLEHELHPWVAFLILPLFAFANAGVSLQGVSLSGLTSLLPV HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHH GIAAGLFIGKPLGIFTFSLLAVKLGIARLPEGIGFKQVFAVSVLCGIGFTMSIFIASLAF HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GDADVVLSTYSRLGILIGSTTAAVVGYGLLRMSLPRVR CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PCAALERRIVTNIIRQFLRQEAAGGIILIVAAIIALIMANTPAQGIYHAFLNLPVMVKV CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEE SSLEIAKPLLLWINDGLMAIFFLVVGLEVKRELMQGSLAGRDKAVFPAIAALGGMLAPAL CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH IYLMFNGADEVTRQGWAIPAATDIAFALGVMALLGNRVPTSLKVFLLALAIIDDLGVIVI HHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IALFYTHEVSMAALGVAAASIAVLAFMNWRGVGKTSLYMIVGLVLWVAILKSGVHATLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH VIIGFMIPLNVKKGPSPSETLEHELHPWVAFLILPLFAFANAGVSLQGVSLSGLTSLLPV HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHH GIAAGLFIGKPLGIFTFSLLAVKLGIARLPEGIGFKQVFAVSVLCGIGFTMSIFIASLAF HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GDADVVLSTYSRLGILIGSTTAAVVGYGLLRMSLPRVR CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: Na (I) [Cytoplasm] + 2 Proton [Periplasm] = Na (I) [Periplasm] + 2 Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA