| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is proP [H]
Identifier: 157368935
GI number: 157368935
Start: 760211
End: 761518
Strand: Direct
Name: proP [H]
Synonym: Spro_0690
Alternate gene names: 157368935
Gene position: 760211-761518 (Clockwise)
Preceding gene: 157368934
Following gene: 157368937
Centisome position: 13.95
GC content: 57.8
Gene sequence:
>1308_bases ATGCCTCACGATAATAATCGCCGGTTAAACCGGCAAGACTACAAAACTCTGACGTTAGCTGCCCTGGGCGGTGCGCTGGA GTTCTATGATTTCATCATTTTTGTCTTCTTTGCGGCGGTGATGGGCGAGCTGTTTTTCCCGGCGGATATGCCGGAATGGC TACGTCAGGTACAAACCTTCGGCATTTTTGCCGCCGGTTATCTGGCCCGCCCGCTGGGCGGCATTGTGATGGCGCACTTC GGCGATCTGGTCGGCCGCAAAAAAATGTTCAGCCTGAGTATTTTGCTGATGGCGTTGCCGACATTGGCGATGGGTCTGTT ACCGACCTATGCCAGCATCGGCATTGCCGCACCGCTGTTGCTGCTGCTGATGCGTGTGCTGCAAGGGGCGGCGATCGGCG GCGAGGTGCCGGGGGCCTGGGTGTTTGTGGCTGAACACGTGCCGCGTCGGCGCATCGGTTTTGCCTGCGGCACGCTGACT GCCGGCCTGACCGTCGGCATCCTGCTGGGCTCGCTGGTGGCGACGGTAATCAACACCACGCTTAGTCAACAGACCATTAT TGACGGTGGCTGGCGTATCCCGTTCCTGCTGGGTGGCATTTTCGGCCTGGTGGCGATGTACCTGCGCCGCTGGCTGCAGG AAACACCGATCTTCATCGAGATGCAGGCGCGTAAGGCCTTGGCAGAAGAGCTGCCGTTGAAATCGGTGGTGCTCAATCAT CGCAAGGAAGTGGTGGTGTCGATGCTGCTGACCTGGCTATTGTCCGCCGGTATTGTGGTGGTGATCCTGATGACCCCGAC CTACCTGCAAAAACAGTTTGCTATCGCCCCGGCGTTATCGCTGCAGGCCAATAGCATCGCCACCATCATGCTGATCGCCG GTTGCATCATCGCCGGCTTGTCGGCGGATCGCTTTGGCGCCAGCAAAACCTTTATCGTCGGCAGCCTGCTGCTGGCCGGT TGCAGTTGGCTATTTTATCGGACGGTGGGCGAACACCCGGAAATGTTGTTTGCCTGCTACGCGCTGGTGGGTTTCAGCGT AGGCGTAGTGGGCGCGGTCCCCTACGTGATGGTGCGGGCTTTTCCGGCGGAAGTGCGATTTACCGGGATTTCGTTCTCAT ATAATGTCGCATACGCCATTTTTGGCGGTTTAACCCCAATATTTGTGACGTTGATCATGAAGTTAACCCCGTTAGCGCCC GCTTACTATGTGCTGGCGCTGTCGGGCATCGGATTGCTGCTGGGGATTTATCTGCATCGCGATCTGAACAGCGAAACCAA GGCACAGCGCGCCGGTTCCTACAGCTGA
Upstream 100 bases:
>100_bases GCTAGCCGATCTGGTGTGAAAATAATTTGCCGTTATAGTAAGGATTCGTTTACAGAAAGCCGCTGGCTTTTATTTTCACA GTTTCCTCCGACGGTACCCT
Downstream 100 bases:
>100_bases AAAAAAAGCCCTGCAATCAACCGCAGGGCTTCTTGTTTCAGGCCAGTGGCGTTTATGCCACTGCCCGAATTGGTTCTACA TTGTCGACTGTTGGCTCGCC
Product: major facilitator transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MPHDNNRRLNRQDYKTLTLAALGGALEFYDFIIFVFFAAVMGELFFPADMPEWLRQVQTFGIFAAGYLARPLGGIVMAHF GDLVGRKKMFSLSILLMALPTLAMGLLPTYASIGIAAPLLLLLMRVLQGAAIGGEVPGAWVFVAEHVPRRRIGFACGTLT AGLTVGILLGSLVATVINTTLSQQTIIDGGWRIPFLLGGIFGLVAMYLRRWLQETPIFIEMQARKALAEELPLKSVVLNH RKEVVVSMLLTWLLSAGIVVVILMTPTYLQKQFAIAPALSLQANSIATIMLIAGCIIAGLSADRFGASKTFIVGSLLLAG CSWLFYRTVGEHPEMLFACYALVGFSVGVVGAVPYVMVRAFPAEVRFTGISFSYNVAYAIFGGLTPIFVTLIMKLTPLAP AYYVLALSGIGLLLGIYLHRDLNSETKAQRAGSYS
Sequences:
>Translated_435_residues MPHDNNRRLNRQDYKTLTLAALGGALEFYDFIIFVFFAAVMGELFFPADMPEWLRQVQTFGIFAAGYLARPLGGIVMAHF GDLVGRKKMFSLSILLMALPTLAMGLLPTYASIGIAAPLLLLLMRVLQGAAIGGEVPGAWVFVAEHVPRRRIGFACGTLT AGLTVGILLGSLVATVINTTLSQQTIIDGGWRIPFLLGGIFGLVAMYLRRWLQETPIFIEMQARKALAEELPLKSVVLNH RKEVVVSMLLTWLLSAGIVVVILMTPTYLQKQFAIAPALSLQANSIATIMLIAGCIIAGLSADRFGASKTFIVGSLLLAG CSWLFYRTVGEHPEMLFACYALVGFSVGVVGAVPYVMVRAFPAEVRFTGISFSYNVAYAIFGGLTPIFVTLIMKLTPLAP AYYVLALSGIGLLLGIYLHRDLNSETKAQRAGSYS >Mature_434_residues PHDNNRRLNRQDYKTLTLAALGGALEFYDFIIFVFFAAVMGELFFPADMPEWLRQVQTFGIFAAGYLARPLGGIVMAHFG DLVGRKKMFSLSILLMALPTLAMGLLPTYASIGIAAPLLLLLMRVLQGAAIGGEVPGAWVFVAEHVPRRRIGFACGTLTA GLTVGILLGSLVATVINTTLSQQTIIDGGWRIPFLLGGIFGLVAMYLRRWLQETPIFIEMQARKALAEELPLKSVVLNHR KEVVVSMLLTWLLSAGIVVVILMTPTYLQKQFAIAPALSLQANSIATIMLIAGCIIAGLSADRFGASKTFIVGSLLLAGC SWLFYRTVGEHPEMLFACYALVGFSVGVVGAVPYVMVRAFPAEVRFTGISFSYNVAYAIFGGLTPIFVTLIMKLTPLAPA YYVLALSGIGLLLGIYLHRDLNSETKAQRAGSYS
Specific function: May be a proton symporter invoved in the uptake of osmolytes such as proline and glycine betaine [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=429, Percent_Identity=28.6713286713287, Blast_Score=192, Evalue=4e-50, Organism=Escherichia coli, GI1788292, Length=409, Percent_Identity=29.8288508557457, Blast_Score=161, Evalue=9e-41, Organism=Escherichia coli, GI1789941, Length=444, Percent_Identity=31.7567567567568, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1788942, Length=438, Percent_Identity=31.0502283105023, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI87082231, Length=502, Percent_Identity=23.9043824701195, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI87082404, Length=422, Percent_Identity=24.1706161137441, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47155; Mature: 47024
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHDNNRRLNRQDYKTLTLAALGGALEFYDFIIFVFFAAVMGELFFPADMPEWLRQVQTF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GIFAAGYLARPLGGIVMAHFGDLVGRKKMFSLSILLMALPTLAMGLLPTYASIGIAAPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLMRVLQGAAIGGEVPGAWVFVAEHVPRRRIGFACGTLTAGLTVGILLGSLVATVINTT HHHHHHHCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQQTIIDGGWRIPFLLGGIFGLVAMYLRRWLQETPIFIEMQARKALAEELPLKSVVLNH HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCHHHHHHHH RKEVVVSMLLTWLLSAGIVVVILMTPTYLQKQFAIAPALSLQANSIATIMLIAGCIIAGL HHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCC SADRFGASKTFIVGSLLLAGCSWLFYRTVGEHPEMLFACYALVGFSVGVVGAVPYVMVRA CCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPAEVRFTGISFSYNVAYAIFGGLTPIFVTLIMKLTPLAPAYYVLALSGIGLLLGIYLHR CCCCEEEEEEEEEHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC DLNSETKAQRAGSYS CCCCHHHHHHCCCCC >Mature Secondary Structure PHDNNRRLNRQDYKTLTLAALGGALEFYDFIIFVFFAAVMGELFFPADMPEWLRQVQTF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GIFAAGYLARPLGGIVMAHFGDLVGRKKMFSLSILLMALPTLAMGLLPTYASIGIAAPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLMRVLQGAAIGGEVPGAWVFVAEHVPRRRIGFACGTLTAGLTVGILLGSLVATVINTT HHHHHHHCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQQTIIDGGWRIPFLLGGIFGLVAMYLRRWLQETPIFIEMQARKALAEELPLKSVVLNH HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCHHHHHHHH RKEVVVSMLLTWLLSAGIVVVILMTPTYLQKQFAIAPALSLQANSIATIMLIAGCIIAGL HHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCC SADRFGASKTFIVGSLLLAGCSWLFYRTVGEHPEMLFACYALVGFSVGVVGAVPYVMVRA CCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPAEVRFTGISFSYNVAYAIFGGLTPIFVTLIMKLTPLAPAYYVLALSGIGLLLGIYLHR CCCCEEEEEEEEEHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC DLNSETKAQRAGSYS CCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA