| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yjjJ [H]
Identifier: 157368909
GI number: 157368909
Start: 729982
End: 731325
Strand: Direct
Name: yjjJ [H]
Synonym: Spro_0664
Alternate gene names: 157368909
Gene position: 729982-731325 (Clockwise)
Preceding gene: 157368908
Following gene: 157368911
Centisome position: 13.4
GC content: 54.09
Gene sequence:
>1344_bases ATGACGGGCATCGAGCAATTACTACGTAATGGCCCAGCGACATCTACAGCACTTACTGAAGCGCTGGGTATCAGTCAACC GACATTATCGCGCCGTATTCGCAATTTGGCAGGAAGCGTACTGGTGATGGGCAAAGGCCGGGCCACCCGCTATGCGTTGC TCAGAAGCGTGGCAGGTGAAGGGCATTTTCCGCTGTATCAGGTGGATGAGCAGGGTAAGGCACATAAGTTTGCCACGCTT TATCCTGTCTATCCGGCTGAAGGATGCGCGGTACAAAATGAGCAAAATGGTGAATGGCAACTTTATGATGGTCTGCCTTG GTATCTTAACGATCTGCGGCCGATAGGTTTTCTTAGCCGGGCATGGGGGAAGGCGGTTTCTCAAGTATTGCGCCTGCCGG AAGATACTCTGCTTTGGAACGAAGAGCAGCGACTGTGGGCGCTTTGTCACTTTGGTGACGACATGAGCGGTAACCTGCTG CCTGGCAACGGCAGCTATCAACGCTGGCTGGTACATGACCTGGAGCAGGCAGTGCCGATGGCGGAAAAAACAGCCCGTTA CGCAGAGCTGGCTGAGAAGGCGCTTGCAGGGGAACTGGTCGGGTCTTCTGCCGGTGGTGAGCAACCCAAGTTTATTGCTT ATGCTGAACTGAGGGACGAGCGACAAGGTCATGTATTGGTTAAATTCAGTACGGCCCCGGAAAACCCCAATGCGCAGCGT TGGAGTGATTTGCTGATCGCAGAGTCACTGGCGTTACAGGTCGTGGCGGAAGCGGGGTTGCCTGCGGCACGAAGTGAAAT CTTGTTGGGTGAAAATCAGCAGTGTTTTCTGGAAATTGAACGGTTCGATCGCATCGGCCCGTTTGGCCGGGTGGCGATGG TTTCACTCGAAGCATTGGATGCCGAGTTTAGCGGTAGCGGCAATGCCAATTGGGTTACGGCGGCGCAAGGGTTATTGCAG CATGGTGTGATAGACAACCCCACCTGTCAGAGAATGGCTCTGTATTGGGCATTCGGCAGGTTGATTGCCAATAGCGATAT GCATCAGGGGAACTTGTCGTTTCTGCACCCCGAACAGCGACCGGTGGTTTTAGCCCCTTTGTATGACATGTTGCCGATGG CATTTGCGCCAACCAGCAGCGGTAATATGCGCCATCAAGCGTTGGAAATCCGATTGGGTCATGAAGTCAGCGGTGCCGTT TGGCGGCAGGCGGAATTGATGGCGCTGGAGTTTTGGCAACGTGTGGCACGGCATACACTTATCAGCGAAGATTTTCGCGT TATCGCCGACCAGATGCTGGCACAGGTTCAGGGGCTGAACGAGCGTATTCAGCGAATGGCTTAA
Upstream 100 bases:
>100_bases TCTATTCACCTTCCCTAAATCATTTCCTGAAAATACTTTACCTGACAGCTAATTAGCGCTATTACTCTATTCATAAATCT ATTCACGAATCTATTCATCT
Downstream 100 bases:
>100_bases GAACCGCTCTCGGGCTTCTTCTCTTCTTCTTTATTCGCATCCGGCCGCGCGTCGTCATCGTCATTTTCTACCGTGTTACC TTCTTCCAATGGCGTATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MTGIEQLLRNGPATSTALTEALGISQPTLSRRIRNLAGSVLVMGKGRATRYALLRSVAGEGHFPLYQVDEQGKAHKFATL YPVYPAEGCAVQNEQNGEWQLYDGLPWYLNDLRPIGFLSRAWGKAVSQVLRLPEDTLLWNEEQRLWALCHFGDDMSGNLL PGNGSYQRWLVHDLEQAVPMAEKTARYAELAEKALAGELVGSSAGGEQPKFIAYAELRDERQGHVLVKFSTAPENPNAQR WSDLLIAESLALQVVAEAGLPAARSEILLGENQQCFLEIERFDRIGPFGRVAMVSLEALDAEFSGSGNANWVTAAQGLLQ HGVIDNPTCQRMALYWAFGRLIANSDMHQGNLSFLHPEQRPVVLAPLYDMLPMAFAPTSSGNMRHQALEIRLGHEVSGAV WRQAELMALEFWQRVARHTLISEDFRVIADQMLAQVQGLNERIQRMA
Sequences:
>Translated_447_residues MTGIEQLLRNGPATSTALTEALGISQPTLSRRIRNLAGSVLVMGKGRATRYALLRSVAGEGHFPLYQVDEQGKAHKFATL YPVYPAEGCAVQNEQNGEWQLYDGLPWYLNDLRPIGFLSRAWGKAVSQVLRLPEDTLLWNEEQRLWALCHFGDDMSGNLL PGNGSYQRWLVHDLEQAVPMAEKTARYAELAEKALAGELVGSSAGGEQPKFIAYAELRDERQGHVLVKFSTAPENPNAQR WSDLLIAESLALQVVAEAGLPAARSEILLGENQQCFLEIERFDRIGPFGRVAMVSLEALDAEFSGSGNANWVTAAQGLLQ HGVIDNPTCQRMALYWAFGRLIANSDMHQGNLSFLHPEQRPVVLAPLYDMLPMAFAPTSSGNMRHQALEIRLGHEVSGAV WRQAELMALEFWQRVARHTLISEDFRVIADQMLAQVQGLNERIQRMA >Mature_446_residues TGIEQLLRNGPATSTALTEALGISQPTLSRRIRNLAGSVLVMGKGRATRYALLRSVAGEGHFPLYQVDEQGKAHKFATLY PVYPAEGCAVQNEQNGEWQLYDGLPWYLNDLRPIGFLSRAWGKAVSQVLRLPEDTLLWNEEQRLWALCHFGDDMSGNLLP GNGSYQRWLVHDLEQAVPMAEKTARYAELAEKALAGELVGSSAGGEQPKFIAYAELRDERQGHVLVKFSTAPENPNAQRW SDLLIAESLALQVVAEAGLPAARSEILLGENQQCFLEIERFDRIGPFGRVAMVSLEALDAEFSGSGNANWVTAAQGLLQH GVIDNPTCQRMALYWAFGRLIANSDMHQGNLSFLHPEQRPVVLAPLYDMLPMAFAPTSSGNMRHQALEIRLGHEVSGAVW RQAELMALEFWQRVARHTLISEDFRVIADQMLAQVQGLNERIQRMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790845, Length=446, Percent_Identity=45.7399103139013, Blast_Score=378, Evalue=1e-106,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012893 - InterPro: IPR012894 [H]
Pfam domain/function: PF07804 HipA_C; PF07805 HipA_N [H]
EC number: NA
Molecular weight: Translated: 49641; Mature: 49510
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIEQLLRNGPATSTALTEALGISQPTLSRRIRNLAGSVLVMGKGRATRYALLRSVAGE CCCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCC GHFPLYQVDEQGKAHKFATLYPVYPAEGCAVQNEQNGEWQLYDGLPWYLNDLRPIGFLSR CCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHHH AWGKAVSQVLRLPEDTLLWNEEQRLWALCHFGDDMSGNLLPGNGSYQRWLVHDLEQAVPM HHHHHHHHHHHCCCHHEEECCCCCEEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHCCH AEKTARYAELAEKALAGELVGSSAGGEQPKFIAYAELRDERQGHVLVKFSTAPENPNAQR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCCCEEEEEEECCCCCCCHHH WSDLLIAESLALQVVAEAGLPAARSEILLGENQQCFLEIERFDRIGPFGRVAMVSLEALD HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEHHHHCCCCCCHHHHEEHHHHC AEFSGSGNANWVTAAQGLLQHGVIDNPTCQRMALYWAFGRLIANSDMHQGNLSFLHPEQR CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC PVVLAPLYDMLPMAFAPTSSGNMRHQALEIRLGHEVSGAVWRQAELMALEFWQRVARHTL CEEEECHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH ISEDFRVIADQMLAQVQGLNERIQRMA HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGIEQLLRNGPATSTALTEALGISQPTLSRRIRNLAGSVLVMGKGRATRYALLRSVAGE CCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCC GHFPLYQVDEQGKAHKFATLYPVYPAEGCAVQNEQNGEWQLYDGLPWYLNDLRPIGFLSR CCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHHH AWGKAVSQVLRLPEDTLLWNEEQRLWALCHFGDDMSGNLLPGNGSYQRWLVHDLEQAVPM HHHHHHHHHHHCCCHHEEECCCCCEEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHCCH AEKTARYAELAEKALAGELVGSSAGGEQPKFIAYAELRDERQGHVLVKFSTAPENPNAQR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCCCEEEEEEECCCCCCCHHH WSDLLIAESLALQVVAEAGLPAARSEILLGENQQCFLEIERFDRIGPFGRVAMVSLEALD HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEHHHHCCCCCCHHHHEEHHHHC AEFSGSGNANWVTAAQGLLQHGVIDNPTCQRMALYWAFGRLIANSDMHQGNLSFLHPEQR CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC PVVLAPLYDMLPMAFAPTSSGNMRHQALEIRLGHEVSGAVWRQAELMALEFWQRVARHTL CEEEECHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH ISEDFRVIADQMLAQVQGLNERIQRMA HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 3299264 [H]