| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ascG [H]
Identifier: 157368822
GI number: 157368822
Start: 641536
End: 642570
Strand: Direct
Name: ascG [H]
Synonym: Spro_0577
Alternate gene names: 157368822
Gene position: 641536-642570 (Clockwise)
Preceding gene: 157368813
Following gene: 157368824
Centisome position: 11.77
GC content: 59.32
Gene sequence:
>1035_bases ATGGCAACAATACTTGAGGTAGCGAACAGGGCGGGCGTGTCGAAAGCGACGGTGTCCCGCGTGTTGTCAGGCAGCGGCTA CGTCAGCCCGGAGAAGCGTGAACGGGTGGATAAAGCCATCGCCGAAACGGGTTACCGGCCCAATCTGCTGGCGCGCAATC TGGCGACCAAAACCACCCAGACCATCGGGCTGGTGGTGACCAACACGCTGTACAGCGGTAACTACTTCAGCGAGCTGATG TTTCAGTCGGCGCGCATCATGGAAGAGCACGGCCGCCAACTGATTTTGGCGGACGGCAAGCACACCGCCGCAGAAGAAAA AGCCGCCATTGAATACCTGCTGGATATGCGCTGCGACGGCGTGATCATCTACCCGCGTTTTCTGTCGATTAGCGAAATGG ACGAGATCATCTCCCGGCACAAGCAGCCGATCCTGGTCATCAACCGTCGGCTCAGGCTGAACGACAGCTACTGCATTTTC AGCGATCAACACGCCGCCAGCGTGACGGCGGTGCAGCAGCTGATCGAGCGGGGGCATCGCGATATCGCTTTTATCACCGG CTCGCTGGATTCCCCTACCGGGCTGGAGCGGCTCTCAGGCTACAAATCTGCGCTGGCGGAACATGATATTGGCGTAAAAG ACGCGCTGATTGTCGAAGGGAAGTGGAACGCGCAAAGCGGCATGGCGGCGGTCGATAAGCTGTTGGCCGGCGGCCACGCC TTTAGCGCGATTGTTGCCAGCAACGACGAGATGGCCATCGGCGCCATCAAGCGGCTGACGGAATGCCAAATCCCGGTGCC GTCCGCCGTGTCGGTGATAGGTTTTGATGATATTCCGCTGGCCCCTTATACCATTCCCTCACTCTCCAGCGTGAAAATGC CGGTGTCCGAAATGATTAAGGAAACCATCCATCGGCTGGTATCGATGCTGGACGGCGGCGAACTGAGCAAGCGCCCCAGC TTCCCGGCCAGCCTGATGCTGCGTGATTCGGTGGCGGCGGGGCCTTATTGGTTGGCAGAGAAGGCGCGCGGTTAA
Upstream 100 bases:
>100_bases TTTGGTTCAAGGGTGGCGACGGGAGCGGGCGTGAAAACATTTCAAACCGGGGGCGTCTTGGGTAGACTGCGCTGACTCAA TCGACTTTGACGGCGCAGAG
Downstream 100 bases:
>100_bases CGGCGGATCAGCATATAGGCGCGCGGCGAACTGCCGGTCATATTTTTAAAGAAGGTTGAGAAGGCGCTGTCGCTGGAGAA TTCAAGCTTACCGGCGATAT
Product: LacI family transcription regulator
Products: NA
Alternate protein names: Cryptic asc operon repressor [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MATILEVANRAGVSKATVSRVLSGSGYVSPEKRERVDKAIAETGYRPNLLARNLATKTTQTIGLVVTNTLYSGNYFSELM FQSARIMEEHGRQLILADGKHTAAEEKAAIEYLLDMRCDGVIIYPRFLSISEMDEIISRHKQPILVINRRLRLNDSYCIF SDQHAASVTAVQQLIERGHRDIAFITGSLDSPTGLERLSGYKSALAEHDIGVKDALIVEGKWNAQSGMAAVDKLLAGGHA FSAIVASNDEMAIGAIKRLTECQIPVPSAVSVIGFDDIPLAPYTIPSLSSVKMPVSEMIKETIHRLVSMLDGGELSKRPS FPASLMLRDSVAAGPYWLAEKARG
Sequences:
>Translated_344_residues MATILEVANRAGVSKATVSRVLSGSGYVSPEKRERVDKAIAETGYRPNLLARNLATKTTQTIGLVVTNTLYSGNYFSELM FQSARIMEEHGRQLILADGKHTAAEEKAAIEYLLDMRCDGVIIYPRFLSISEMDEIISRHKQPILVINRRLRLNDSYCIF SDQHAASVTAVQQLIERGHRDIAFITGSLDSPTGLERLSGYKSALAEHDIGVKDALIVEGKWNAQSGMAAVDKLLAGGHA FSAIVASNDEMAIGAIKRLTECQIPVPSAVSVIGFDDIPLAPYTIPSLSSVKMPVSEMIKETIHRLVSMLDGGELSKRPS FPASLMLRDSVAAGPYWLAEKARG >Mature_343_residues ATILEVANRAGVSKATVSRVLSGSGYVSPEKRERVDKAIAETGYRPNLLARNLATKTTQTIGLVVTNTLYSGNYFSELMF QSARIMEEHGRQLILADGKHTAAEEKAAIEYLLDMRCDGVIIYPRFLSISEMDEIISRHKQPILVINRRLRLNDSYCIFS DQHAASVTAVQQLIERGHRDIAFITGSLDSPTGLERLSGYKSALAEHDIGVKDALIVEGKWNAQSGMAAVDKLLAGGHAF SAIVASNDEMAIGAIKRLTECQIPVPSAVSVIGFDDIPLAPYTIPSLSSVKMPVSEMIKETIHRLVSMLDGGELSKRPSF PASLMLRDSVAAGPYWLAEKARG
Specific function: Repressor of the asc operon. The cryptic operon is activated by the insertion of IS186 into the ascG gene [H]
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789068, Length=333, Percent_Identity=62.4624624624625, Blast_Score=436, Evalue=1e-124, Organism=Escherichia coli, GI1788474, Length=334, Percent_Identity=35.9281437125749, Blast_Score=182, Evalue=2e-47, Organism=Escherichia coli, GI1789202, Length=333, Percent_Identity=32.7327327327327, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1787948, Length=341, Percent_Identity=30.791788856305, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1790194, Length=317, Percent_Identity=32.1766561514196, Blast_Score=148, Evalue=4e-37, Organism=Escherichia coli, GI1790369, Length=339, Percent_Identity=30.0884955752212, Blast_Score=137, Evalue=8e-34, Organism=Escherichia coli, GI1787580, Length=319, Percent_Identity=29.7805642633229, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1786540, Length=336, Percent_Identity=30.3571428571429, Blast_Score=131, Evalue=8e-32, Organism=Escherichia coli, GI1787906, Length=302, Percent_Identity=28.1456953642384, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI48994940, Length=322, Percent_Identity=26.0869565217391, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1790715, Length=302, Percent_Identity=23.841059602649, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790689, Length=325, Percent_Identity=24.9230769230769, Blast_Score=78, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37460; Mature: 37328
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATILEVANRAGVSKATVSRVLSGSGYVSPEKRERVDKAIAETGYRPNLLARNLATKTTQ CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TIGLVVTNTLYSGNYFSELMFQSARIMEEHGRQLILADGKHTAAEEKAAIEYLLDMRCDG HEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC VIIYPRFLSISEMDEIISRHKQPILVINRRLRLNDSYCIFSDQHAASVTAVQQLIERGHR EEEEECCCCHHHHHHHHHHCCCCEEEEECEEEECCCEEEECCCHHHHHHHHHHHHHCCCC DIAFITGSLDSPTGLERLSGYKSALAEHDIGVKDALIVEGKWNAQSGMAAVDKLLAGGHA EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCH FSAIVASNDEMAIGAIKRLTECQIPVPSAVSVIGFDDIPLAPYTIPSLSSVKMPVSEMIK HEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH ETIHRLVSMLDGGELSKRPSFPASLMLRDSVAAGPYWLAEKARG HHHHHHHHHHCCCCCCCCCCCCHHHEEHHCCCCCCHHHHHCCCC >Mature Secondary Structure ATILEVANRAGVSKATVSRVLSGSGYVSPEKRERVDKAIAETGYRPNLLARNLATKTTQ CHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TIGLVVTNTLYSGNYFSELMFQSARIMEEHGRQLILADGKHTAAEEKAAIEYLLDMRCDG HEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC VIIYPRFLSISEMDEIISRHKQPILVINRRLRLNDSYCIFSDQHAASVTAVQQLIERGHR EEEEECCCCHHHHHHHHHHCCCCEEEEECEEEECCCEEEECCCHHHHHHHHHHHHHCCCC DIAFITGSLDSPTGLERLSGYKSALAEHDIGVKDALIVEGKWNAQSGMAAVDKLLAGGHA EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCH FSAIVASNDEMAIGAIKRLTECQIPVPSAVSVIGFDDIPLAPYTIPSLSSVKMPVSEMIK HEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH ETIHRLVSMLDGGELSKRPSFPASLMLRDSVAAGPYWLAEKARG HHHHHHHHHHCCCCCCCCCCCCHHHEEHHCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1630307; 9278503 [H]