| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is purH [H]
Identifier: 157368542
GI number: 157368542
Start: 334269
End: 335858
Strand: Reverse
Name: purH [H]
Synonym: Spro_0293
Alternate gene names: 157368542
Gene position: 335858-334269 (Counterclockwise)
Preceding gene: 157368544
Following gene: 157368541
Centisome position: 6.16
GC content: 58.99
Gene sequence:
>1590_bases ATGCAACAACCTCGTCCAATCCGCCGGGCCCTGCTCAGCGTCTCTGACAAAGCCGGTATCGTTGAATTCGCCGAAGCGCT GTCCCAGCGTGGCGTTGAACTGCTCTCCACCGGTGGCACCGCCCGCCTGCTGGCAGATGCCGGCCTGCCTGTTACCGAAG TTTCCGACTACACCGGCTTCCCGGAAATGATGGACGGACGAGTAAAGACCCTGCACCCCAAAGTACACGGCGGTATTCTC GGCCGCCGCGGCCAGGACGACGCCATCATGGGTCAGCATGACATCAAGCCGATCGACATGGTGGTGGTAAACCTCTATCC GTTCGCCCAGACCGTGGCGCGCCCGAACTGCTCACTGGAAGACGCGGTCGAGAACATCGACATCGGCGGCCCAACCATGG TGCGTTCCGCGGCCAAGAACCACAAAGACGTCGCCATCGTGGTAAAGAGCAGCGACTACGCCGCTATTATTACCGAGATG GATAACAACGACGGTTCACTGCAATACACCACCCGTTTCGATCTGGCCATCAAAGCCTTCGAGCACACCGCCGCTTACGA CAGCATGATCGCCAACTACTTCGGCGCGCTGGTTCCGGCCTACCACGGCGATACCGAACAACCTGCCGGTCGTTTCCCTC GCACCCTGAACCTCAACTATATAAAGAAGCAGGATATGCGCTACGGTGAGAACAGCCACCAGCAAGCAGCCTTCTATATA GAAGAGAACGTTCAGGAAGCCTCTGTCGCCACCGCGGAACAACTGCAAGGCAAAGCGCTGTCCTACAACAACATCGCCGA CACCGACGCCGCACTGGAATGTGTGAAGGAATTCGCCGAGCCGGCCTGCGTGATCGTCAAGCACGCCAACCCATGCGGTG TGGCGATCGGCGATGATATTCTGTCTGCCTATGAGCGCGCCTATCAAACCGACCCGACCTCTGCTTTCGGCGGCATCATC GCCTTTAACCGCGAACTGGACGCCGCTACCGCACAGGCCATTATCAGCCGTCAGTTTGTGGAAGTGATTATCGCGCCGAG CATCAGTCAGGAAGCTCGCTCCCTGTTGGCAGCCAAACAGAACGTGCGCGTACTGGCCTGCGGCCAATGGCAGCAACGTA TTGCCGCTCTCGACTTCAAACGTGTCAACGGTGGCCTGCTGGTGCAAGACCGCGATCTGGGTATGGTGAGCGAAGGCGAC CTGCGCGTGGTATCTGAACGTCAGCCGACCGCGCAGGAACTGCGTGATGCGCTGTTCTGTTGGAAAGTCGCCAAGTTCGT GAAGTCCAACGCTATCGTCTATGCACGTGACAACATGACCATCGGCATAGGCGCCGGGCAAATGAGCCGCGTTTACTCTG CCAAGATCGCCGGGATCAAAGCCGCGGACGAAGGCCTGGAAGTCAAAGGCTCCGCCATGGCGTCTGACGCTTTCTTCCCG TTCCGTGATGGCATCGATGCCGCCGCAGCGGTGGGCATCAGCTGCGTGATCCAGCCAGGCGGTTCGATCCGCGATGATGA AGTGATTGCCGCCGCCAATGAGCACGGCATCGCAATGATCTTCACCGACATGCGCCACTTCCGCCATTAA
Upstream 100 bases:
>100_bases TACCCCTTTATAGAGAGAAAAACCTTTCCTTATAAAGAGTAGAAGGTGGAAATTCACGTAACGCTCTTTTATTGCGACTC CAAAGCCAAGGGATAAAACC
Downstream 100 bases:
>100_bases TCCCTTTTGCCGCGTGCGCTACGGCGCACGCTCTGCGTGGAGCACCTGATGAATATTTTAATTATCGGCAACGGCGGGCG TGAACACGCGCTGGCCTGGA
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MQQPRPIRRALLSVSDKAGIVEFAEALSQRGVELLSTGGTARLLADAGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGIL GRRGQDDAIMGQHDIKPIDMVVVNLYPFAQTVARPNCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYAAIITEM DNNDGSLQYTTRFDLAIKAFEHTAAYDSMIANYFGALVPAYHGDTEQPAGRFPRTLNLNYIKKQDMRYGENSHQQAAFYI EENVQEASVATAEQLQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGDDILSAYERAYQTDPTSAFGGII AFNRELDAATAQAIISRQFVEVIIAPSISQEARSLLAAKQNVRVLACGQWQQRIAALDFKRVNGGLLVQDRDLGMVSEGD LRVVSERQPTAQELRDALFCWKVAKFVKSNAIVYARDNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSAMASDAFFP FRDGIDAAAAVGISCVIQPGGSIRDDEVIAAANEHGIAMIFTDMRHFRH
Sequences:
>Translated_529_residues MQQPRPIRRALLSVSDKAGIVEFAEALSQRGVELLSTGGTARLLADAGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGIL GRRGQDDAIMGQHDIKPIDMVVVNLYPFAQTVARPNCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYAAIITEM DNNDGSLQYTTRFDLAIKAFEHTAAYDSMIANYFGALVPAYHGDTEQPAGRFPRTLNLNYIKKQDMRYGENSHQQAAFYI EENVQEASVATAEQLQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGDDILSAYERAYQTDPTSAFGGII AFNRELDAATAQAIISRQFVEVIIAPSISQEARSLLAAKQNVRVLACGQWQQRIAALDFKRVNGGLLVQDRDLGMVSEGD LRVVSERQPTAQELRDALFCWKVAKFVKSNAIVYARDNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSAMASDAFFP FRDGIDAAAAVGISCVIQPGGSIRDDEVIAAANEHGIAMIFTDMRHFRH >Mature_529_residues MQQPRPIRRALLSVSDKAGIVEFAEALSQRGVELLSTGGTARLLADAGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGIL GRRGQDDAIMGQHDIKPIDMVVVNLYPFAQTVARPNCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYAAIITEM DNNDGSLQYTTRFDLAIKAFEHTAAYDSMIANYFGALVPAYHGDTEQPAGRFPRTLNLNYIKKQDMRYGENSHQQAAFYI EENVQEASVATAEQLQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGDDILSAYERAYQTDPTSAFGGII AFNRELDAATAQAIISRQFVEVIIAPSISQEARSLLAAKQNVRVLACGQWQQRIAALDFKRVNGGLLVQDRDLGMVSEGD LRVVSERQPTAQELRDALFCWKVAKFVKSNAIVYARDNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSAMASDAFFP FRDGIDAAAAVGISCVIQPGGSIRDDEVIAAANEHGIAMIFTDMRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=488, Percent_Identity=38.9344262295082, Blast_Score=280, Evalue=3e-75, Organism=Escherichia coli, GI1790439, Length=529, Percent_Identity=87.7126654064272, Blast_Score=965, Evalue=0.0, Organism=Caenorhabditis elegans, GI71985564, Length=614, Percent_Identity=33.5504885993485, Blast_Score=280, Evalue=1e-75, Organism=Caenorhabditis elegans, GI71985574, Length=352, Percent_Identity=27.8409090909091, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71985556, Length=115, Percent_Identity=37.3913043478261, Blast_Score=77, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323768, Length=485, Percent_Identity=35.4639175257732, Blast_Score=261, Evalue=3e-70, Organism=Saccharomyces cerevisiae, GI6323056, Length=497, Percent_Identity=34.20523138833, Blast_Score=255, Evalue=1e-68, Organism=Drosophila melanogaster, GI24649832, Length=611, Percent_Identity=34.860883797054, Blast_Score=301, Evalue=1e-81,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 57336; Mature: 57336
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQPRPIRRALLSVSDKAGIVEFAEALSQRGVELLSTGGTARLLADAGLPVTEVSDYTGF CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCEEEEECCCCCHHCCCCCCCC PEMMDGRVKTLHPKVHGGILGRRGQDDAIMGQHDIKPIDMVVVNLYPFAQTVARPNCSLE HHHHCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCHH DAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYAAIITEMDNNDGSLQYTTRFDLAIKAF HHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEEEEEHHH EHTAAYDSMIANYFGALVPAYHGDTEQPAGRFPRTLNLNYIKKQDMRYGENSHQQAAFYI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCEEEEE EENVQEASVATAEQLQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGDDI ECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEECHHH LSAYERAYQTDPTSAFGGIIAFNRELDAATAQAIISRQFVEVIIAPSISQEARSLLAAKQ HHHHHHHHCCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC NVRVLACGQWQQRIAALDFKRVNGGLLVQDRDLGMVSEGDLRVVSERQPTAQELRDALFC CCEEEEECCHHHHHHHHHHEECCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHH WKVAKFVKSNAIVYARDNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSAMASDAFFP HHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHCCCEECCCCCEECCCEEECCCCCC FRDGIDAAAAVGISCVIQPGGSIRDDEVIAAANEHGIAMIFTDMRHFRH CCCCCCHHHHCCEEEEECCCCCCCCCCEEEECCCCCEEEEEECHHHHCC >Mature Secondary Structure MQQPRPIRRALLSVSDKAGIVEFAEALSQRGVELLSTGGTARLLADAGLPVTEVSDYTGF CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCEEEEECCCCCHHCCCCCCCC PEMMDGRVKTLHPKVHGGILGRRGQDDAIMGQHDIKPIDMVVVNLYPFAQTVARPNCSLE HHHHCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCHH DAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYAAIITEMDNNDGSLQYTTRFDLAIKAF HHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEEEEEHHH EHTAAYDSMIANYFGALVPAYHGDTEQPAGRFPRTLNLNYIKKQDMRYGENSHQQAAFYI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCEEEEE EENVQEASVATAEQLQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGDDI ECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEECHHH LSAYERAYQTDPTSAFGGIIAFNRELDAATAQAIISRQFVEVIIAPSISQEARSLLAAKQ HHHHHHHHCCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC NVRVLACGQWQQRIAALDFKRVNGGLLVQDRDLGMVSEGDLRVVSERQPTAQELRDALFC CCEEEEECCHHHHHHHHHHEECCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHH WKVAKFVKSNAIVYARDNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSAMASDAFFP HHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHCCCEECCCCCEECCCEEECCCCCC FRDGIDAAAAVGISCVIQPGGSIRDDEVIAAANEHGIAMIFTDMRHFRH CCCCCCHHHHCCEEEEECCCCCCCCCCEEEECCCCCEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA