Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is yigB [H]

Identifier: 157368434

GI number: 157368434

Start: 208348

End: 209064

Strand: Direct

Name: yigB [H]

Synonym: Spro_0185

Alternate gene names: 157368434

Gene position: 208348-209064 (Clockwise)

Preceding gene: 157368433

Following gene: 157368435

Centisome position: 3.82

GC content: 60.95

Gene sequence:

>717_bases
ATGCATTTTTATCGTCCGCTGCGACCGCTGGCGGCGCTGACTTTTGATCTGGACGACACGCTGTATGACAATCGGCCGGT
GATCAAACAGACCGAGCTGCAGTCGGTGGCGTTTTTGCAGAACTACCATCCCGGGCTGAACCACTTCCAGTCGGCGGATT
TTCATCGCCTGCGCCAGGAGCTGCGCGAACAGGATCCGGAGATTTATCACGATGTCACCCAGTGGCGCTGGCGCGCTATC
CATTTGGCGCTGAGCCGTCAGGGGCTGCGTGACGCCGAAGCCGCCGACGGCGCCGATGCGGCGATGCAGAACTTTGCGCT
GTGGCGCAGCCGCATCGAGGTACCGGAAGCAACCCATACCACCCTGAAAGCGCTGGGTGAACGTTTCCCGCTGGTGGCGA
TCACCAACGGCAATGCCGATCCGGCACTGTGCGGGCTGGATGGTTACTTCCAGTTTGTGCTGCGTTCCGGGCCGGATGGC
CGCGCCAAGCCCTATCAGGACATGTATCAACTGGCCGCCGAGCGGTTAGGGGTGGCCCCGGAACGCATTCTTCACGTGGG
TGATGATTTGACCACCGACGTCGCCGGGGCATTGCGTTCCGGTCTGCAGGCCTGTTGGATCAACGACCGCCAGCGCAGCC
TGATGCAGGCCGCCGACAGCCGGTTGCTGCCACATATTGAGATTTCGCAGTTGGCATCGCTGACAGCATTGTTATAA

Upstream 100 bases:

>100_bases
CCAATCTGACCACCACTCAAATCTACACCCACCTCGACTTTCAACATCTGGCGAACGTGTACGATGCTGCGCATCCACGC
GCCAAACGGGGGAAATCCTG

Downstream 100 bases:

>100_bases
TCCCTGCCAGAACTCTGTATAAATTCCCAGTGGAATCGCGTCTCTGACGCGCTTTCCCTTACCAATTAATGGTGCCTATG
GACGTTTCCGATCTGCTCGA

Product: flavin mononucleotide phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MHFYRPLRPLAALTFDLDDTLYDNRPVIKQTELQSVAFLQNYHPGLNHFQSADFHRLRQELREQDPEIYHDVTQWRWRAI
HLALSRQGLRDAEAADGADAAMQNFALWRSRIEVPEATHTTLKALGERFPLVAITNGNADPALCGLDGYFQFVLRSGPDG
RAKPYQDMYQLAAERLGVAPERILHVGDDLTTDVAGALRSGLQACWINDRQRSLMQAADSRLLPHIEISQLASLTALL

Sequences:

>Translated_238_residues
MHFYRPLRPLAALTFDLDDTLYDNRPVIKQTELQSVAFLQNYHPGLNHFQSADFHRLRQELREQDPEIYHDVTQWRWRAI
HLALSRQGLRDAEAADGADAAMQNFALWRSRIEVPEATHTTLKALGERFPLVAITNGNADPALCGLDGYFQFVLRSGPDG
RAKPYQDMYQLAAERLGVAPERILHVGDDLTTDVAGALRSGLQACWINDRQRSLMQAADSRLLPHIEISQLASLTALL
>Mature_238_residues
MHFYRPLRPLAALTFDLDDTLYDNRPVIKQTELQSVAFLQNYHPGLNHFQSADFHRLRQELREQDPEIYHDVTQWRWRAI
HLALSRQGLRDAEAADGADAAMQNFALWRSRIEVPEATHTTLKALGERFPLVAITNGNADPALCGLDGYFQFVLRSGPDG
RAKPYQDMYQLAAERLGVAPERILHVGDDLTTDVAGALRSGLQACWINDRQRSLMQAADSRLLPHIEISQLASLTALL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Escherichia coli, GI2367295, Length=238, Percent_Identity=65.1260504201681, Blast_Score=319, Evalue=1e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26912; Mature: 26912

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFYRPLRPLAALTFDLDDTLYDNRPVIKQTELQSVAFLQNYHPGLNHFQSADFHRLRQE
CCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHH
LREQDPEIYHDVTQWRWRAIHLALSRQGLRDAEAADGADAAMQNFALWRSRIEVPEATHT
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
TLKALGERFPLVAITNGNADPALCGLDGYFQFVLRSGPDGRAKPYQDMYQLAAERLGVAP
HHHHHHHHCCEEEEECCCCCCCEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCH
ERILHVGDDLTTDVAGALRSGLQACWINDRQRSLMQAADSRLLPHIEISQLASLTALL
HHHHHCCCCHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MHFYRPLRPLAALTFDLDDTLYDNRPVIKQTELQSVAFLQNYHPGLNHFQSADFHRLRQE
CCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHH
LREQDPEIYHDVTQWRWRAIHLALSRQGLRDAEAADGADAAMQNFALWRSRIEVPEATHT
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
TLKALGERFPLVAITNGNADPALCGLDGYFQFVLRSGPDGRAKPYQDMYQLAAERLGVAP
HHHHHHHHCCEEEEECCCCCCCEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCH
ERILHVGDDLTTDVAGALRSGLQACWINDRQRSLMQAADSRLLPHIEISQLASLTALL
HHHHHCCCCHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]