| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is wecC [H]
Identifier: 157368413
GI number: 157368413
Start: 185533
End: 186795
Strand: Direct
Name: wecC [H]
Synonym: Spro_0164
Alternate gene names: 157368413
Gene position: 185533-186795 (Clockwise)
Preceding gene: 157368412
Following gene: 157368414
Centisome position: 3.4
GC content: 56.61
Gene sequence:
>1263_bases ATGAGTTTTAACACTATTTCGGTTATCGGCCTGGGTTACATCGGTCTGCCAACGGCGGCGGCGTTTGCCTCCCGCAAGAA AAAAGTGGTGGGCGTAGATGTTAACCAACATGCGGTGGATACCATTAATCGCGGCGCGATCCACATCGTTGAACCCGATC TGGATAAAGTGGTGAAAGACGCGGTCGACGGCGGCTACCTGCAGGCGGTGACCCAACCCCTGGCTGCGGACGCTTTCCTG ATCGCGGTGCCAACGCCGTTTAAAGGTGACCATGAGCCGGATCTGGCCTATGTAGAAGCTGCGGCCAAATCTCTGGCACC GGTGCTCAAAAAGGGCGATCTGGTTATCCTGGAATCCACCTCTCCGGTCGGCGCCACCGAGCAGATGGCGCAGTGGCTGG CCGAGGCGCGCAGCGATCTCAGCTTCCCGCAGCAGGCGGGTGAAGCCGCTGATGTGAATATCGCTTATTGCCCAGAGCGC GTTCTGCCAGGGCAGGTGATGGTTGAGCTGATTCAGAACGACCGCGTTATTGGCGGCATGACGCCAAAATGTTCGGAGCG CGCCAGCGCGTTGTACAAGATTTTCCTCGAAGGCGAGTGCGTCATTACCAATTCACGTACTGCAGAGATGTGCAAACTCA CCGAAAATAGCTTCCGCGACGTGAATATCGCCTTTGCCAACGAACTGTCGTTGATTTGCGCCGATCAGGGCATCAATGTC TGGGAGCTTATTCGCTTGGCCAACCGCCATCCGCGGGTGAATATCCTGCAGCCAGGCCCTGGCGTTGGTGGCCACTGTAT CGCGGTCGACCCTTGGTTTATCGTGTCGCAAAACCCGCAGCAGGCACGTTTGATTCATACTGCGCGTCTGGTGAATGACG GAAAACCTTTGTGGGTAGTGGATCGCGTGAAAGCGGCCGTTGCCGACTGTCTGGCGGCGACCGACAAGCGCGCTTCAGAA GTGAAAATTGCCTGTTTCGGCCTGGCCTTCAAGCCAAATATCGACGATCTGCGTGAAAGTCCGGCGGTGGAAGTGGCCCA TCTGATTGCCGATTGGCACGTGGGAGAAACGCTGGTCGTTGAGCCGAACGTGGAACAGTTGCCGAAATCGTTGGTAGGCC ACGTGACGCTGAAAGCGTTGCCAGAAGCGCTGCAGCAGGCGGATGTGATCGTGATGCTGGTCGATCATAAGCAATTCAAG GCGATCAAGCCGGAAGAAATTACGCAGTCCTGGATCGTGGATACCAAAGGGGTTTGGCGTTGA
Upstream 100 bases:
>100_bases AAGACGAATATCACGCCATGAGCCGGGCGCATAACCCTTACGGTGACGGGCATGCCTGCCAGCGTATTCTCGAAGCTTTG AAGAATCATCAGGTGACACT
Downstream 100 bases:
>100_bases AACGTATTTTAGTCACTGGAGGCGCCGGCTTTATTGGCTCCGCAGTCGTGAGGCATATTATCGAAGCCACGCAGGACAGT GTCCTGGTGCTGGATAAGCT
Product: UDP-N-acetyl-D-mannosamine dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSFNTISVIGLGYIGLPTAAAFASRKKKVVGVDVNQHAVDTINRGAIHIVEPDLDKVVKDAVDGGYLQAVTQPLAADAFL IAVPTPFKGDHEPDLAYVEAAAKSLAPVLKKGDLVILESTSPVGATEQMAQWLAEARSDLSFPQQAGEAADVNIAYCPER VLPGQVMVELIQNDRVIGGMTPKCSERASALYKIFLEGECVITNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQQARLIHTARLVNDGKPLWVVDRVKAAVADCLAATDKRASE VKIACFGLAFKPNIDDLRESPAVEVAHLIADWHVGETLVVEPNVEQLPKSLVGHVTLKALPEALQQADVIVMLVDHKQFK AIKPEEITQSWIVDTKGVWR
Sequences:
>Translated_420_residues MSFNTISVIGLGYIGLPTAAAFASRKKKVVGVDVNQHAVDTINRGAIHIVEPDLDKVVKDAVDGGYLQAVTQPLAADAFL IAVPTPFKGDHEPDLAYVEAAAKSLAPVLKKGDLVILESTSPVGATEQMAQWLAEARSDLSFPQQAGEAADVNIAYCPER VLPGQVMVELIQNDRVIGGMTPKCSERASALYKIFLEGECVITNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQQARLIHTARLVNDGKPLWVVDRVKAAVADCLAATDKRASE VKIACFGLAFKPNIDDLRESPAVEVAHLIADWHVGETLVVEPNVEQLPKSLVGHVTLKALPEALQQADVIVMLVDHKQFK AIKPEEITQSWIVDTKGVWR >Mature_419_residues SFNTISVIGLGYIGLPTAAAFASRKKKVVGVDVNQHAVDTINRGAIHIVEPDLDKVVKDAVDGGYLQAVTQPLAADAFLI AVPTPFKGDHEPDLAYVEAAAKSLAPVLKKGDLVILESTSPVGATEQMAQWLAEARSDLSFPQQAGEAADVNIAYCPERV LPGQVMVELIQNDRVIGGMTPKCSERASALYKIFLEGECVITNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINVW ELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQQARLIHTARLVNDGKPLWVVDRVKAAVADCLAATDKRASEV KIACFGLAFKPNIDDLRESPAVEVAHLIADWHVGETLVVEPNVEQLPKSLVGHVTLKALPEALQQADVIVMLVDHKQFKA IKPEEITQSWIVDTKGVWR
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=445, Percent_Identity=26.7415730337079, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI296040438, Length=347, Percent_Identity=25.9365994236311, Blast_Score=72, Evalue=8e-13, Organism=Escherichia coli, GI48994968, Length=420, Percent_Identity=82.6190476190476, Blast_Score=725, Evalue=0.0, Organism=Escherichia coli, GI1788340, Length=406, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17560350, Length=381, Percent_Identity=29.9212598425197, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI17136908, Length=409, Percent_Identity=28.6063569682152, Blast_Score=108, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 45583; Mature: 45452
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNTISVIGLGYIGLPTAAAFASRKKKVVGVDVNQHAVDTINRGAIHIVEPDLDKVVKD CCCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHH AVDGGYLQAVTQPLAADAFLIAVPTPFKGDHEPDLAYVEAAAKSLAPVLKKGDLVILEST HCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC SPVGATEQMAQWLAEARSDLSFPQQAGEAADVNIAYCPERVLPGQVMVELIQNDRVIGGM CCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEECC TPKCSERASALYKIFLEGECVITNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV CCCHHHHHHHHEEEEECCEEEEECCCCHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCH WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQQARLIHTARLVNDGKPLWVV HHHHHHHCCCCCEEEECCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHCCCCCEEEH DRVKAAVADCLAATDKRASEVKIACFGLAFKPNIDDLRESPAVEVAHLIADWHVGETLVV HHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCEEEE EPNVEQLPKSLVGHVTLKALPEALQQADVIVMLVDHKQFKAIKPEEITQSWIVDTKGVWR CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHHHEECCCCCCC >Mature Secondary Structure SFNTISVIGLGYIGLPTAAAFASRKKKVVGVDVNQHAVDTINRGAIHIVEPDLDKVVKD CCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHH AVDGGYLQAVTQPLAADAFLIAVPTPFKGDHEPDLAYVEAAAKSLAPVLKKGDLVILEST HCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC SPVGATEQMAQWLAEARSDLSFPQQAGEAADVNIAYCPERVLPGQVMVELIQNDRVIGGM CCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEECC TPKCSERASALYKIFLEGECVITNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV CCCHHHHHHHHEEEEECCEEEEECCCCHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCH WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQQARLIHTARLVNDGKPLWVV HHHHHHHCCCCCEEEECCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHCCCCCEEEH DRVKAAVADCLAATDKRASEVKIACFGLAFKPNIDDLRESPAVEVAHLIADWHVGETLVV HHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCEEEE EPNVEQLPKSLVGHVTLKALPEALQQADVIVMLVDHKQFKAIKPEEITQSWIVDTKGVWR CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]