| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368373
Identifier: 157368373
GI number: 157368373
Start: 133243
End: 134691
Strand: Direct
Name: 157368373
Synonym: Spro_0124
Alternate gene names: NA
Gene position: 133243-134691 (Clockwise)
Preceding gene: 157368367
Following gene: 157368376
Centisome position: 2.45
GC content: 59.63
Gene sequence:
>1449_bases ATGCCTTCCAGGGCGATAATTAAATGGACCAAACGGCTGACGATTGTGGCTGTCACCGTATTGCTCACGCTGTTTGCGGT GCGCGTTTACGATACTCAGAGCGGTCCGGCGCTGGAGCCGTGGCATACCTTTGTGCCACACGAGCTGTCGGCCGCCGAAA TGGACAACACCGACTGGCAGGGTTATCTGGCCGCAGAGAGCCGGGTGTTTGATGAGGTGAAGGTCAACGTCACGGACAAA CTCTCCGCCAGCGAACGTATTCCGCTTAATCGCTATTTTGACGGCAGTCCGGTGTATCCGGAGCACTTTACCCGTGACTG GAACCGTTCCTATGAGCTGATGCCAGAGGGCGAACCGCGTGGGGCGGTGGTGCTGTTACATGGCCTGACCGATTCCCCTT ACAGCCTGCGGCACATTGCCGAGAACTACCGTCAGCATGGTTATGTGGCGGTCGGCATTCGCCTGCCGGCACACGGCACG GTGCCGGGCGCCCTGACCGATATTGAATGGCAAGACTGGTTGGCGGCAACGCGGCTAGCGGTACGTGAGGCGCGCAGTAA GGCCGGGGGCGACAAGCCGCTGCATATCGTGGGCTTTTCCAACGGCGGTGCGCTGGCGATGAAGTACGCGCTGGATGCAT TGGACGATCCGCAGTTGGCGGCACCGCAGCGGTTGATCCTGATCTCACCGATGATTGGCGTCACCAGTTTTGCCCGTTTC GCCGGTATTGCCGGTTGGCCTGCGGTGTTCCCGGCGTTTGCCAAGGCCGCGTGGCTCGGCGTCTTGCCGGAATTTAACCC TTTCAAATACAACTCGTTCCCGGTGAACGGAGCGCGTCAGTCTTATCTGCTCAGTAATGGTCTGCAACAGCAAATCGCCC GTGCGGCGCGTGATGGCAGGCTGGATAAATTAGCGCCGGTGCTGACCTTCCAGTCGGTGATGGATTCTACCGTCAGCACC CGGGCGGTGATCCGCGCGTTATACAACGAATTGCCGGCTAACGGCAGCGAACTGGTGCTGTTTGACGTCAATCGTACGGT CAACTTCGGCCCGCTGCTGCGACCAAACGCGGCGGCGGCAGTCAGCCAATTGCTGCCTGCGCCCCCACGCCGCTACCAGA CCACGGTGATTGCCAACGCCTCACCGGATAGCAGTGAGGCGATCGCCAGCGTAACGCCAGCCGGGGCAACGACGGTAAGT GAGCAGCCGCTGGGCATGACTTACCCAGCGGATATTTATTCGTTGTCGCATGTGGCGTTGCCATTCCCGGTAAGCGATTC GCTTTATGGTCGTTTCCCGGTGCAGCGTGGCGAGTTTGGTATTAGCCTCGGCACGCTTGCTGCGCGTGGTGAACGCTCGG TGCTGGTGGTGGACCTCGATTCGCTAATGCGCATCGCCTCCAACCCGTTTTTCCCTTATCTGCTGCAGCGCATTGATAGC AAACTTTAG
Upstream 100 bases:
>100_bases CTAAAAATCGGTGGGTCACGCCCGGCGATCGTCGAGCTGCCCCTGCGGGCATTTAACTTCTATAATCGCTGCTGGGATAA CCGTGAATTCAGGAGTGGGC
Downstream 100 bases:
>100_bases CCGAAACCGAGGATGCTAAACGCGTCGTCCTGTGGGTAGTAACCCAGCAGTTGGCTGGTTTCCTCCAGCGACAGCCGCTT ATAGCGGTTGTTGGAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MPSRAIIKWTKRLTIVAVTVLLTLFAVRVYDTQSGPALEPWHTFVPHELSAAEMDNTDWQGYLAAESRVFDEVKVNVTDK LSASERIPLNRYFDGSPVYPEHFTRDWNRSYELMPEGEPRGAVVLLHGLTDSPYSLRHIAENYRQHGYVAVGIRLPAHGT VPGALTDIEWQDWLAATRLAVREARSKAGGDKPLHIVGFSNGGALAMKYALDALDDPQLAAPQRLILISPMIGVTSFARF AGIAGWPAVFPAFAKAAWLGVLPEFNPFKYNSFPVNGARQSYLLSNGLQQQIARAARDGRLDKLAPVLTFQSVMDSTVST RAVIRALYNELPANGSELVLFDVNRTVNFGPLLRPNAAAAVSQLLPAPPRRYQTTVIANASPDSSEAIASVTPAGATTVS EQPLGMTYPADIYSLSHVALPFPVSDSLYGRFPVQRGEFGISLGTLAARGERSVLVVDLDSLMRIASNPFFPYLLQRIDS KL
Sequences:
>Translated_482_residues MPSRAIIKWTKRLTIVAVTVLLTLFAVRVYDTQSGPALEPWHTFVPHELSAAEMDNTDWQGYLAAESRVFDEVKVNVTDK LSASERIPLNRYFDGSPVYPEHFTRDWNRSYELMPEGEPRGAVVLLHGLTDSPYSLRHIAENYRQHGYVAVGIRLPAHGT VPGALTDIEWQDWLAATRLAVREARSKAGGDKPLHIVGFSNGGALAMKYALDALDDPQLAAPQRLILISPMIGVTSFARF AGIAGWPAVFPAFAKAAWLGVLPEFNPFKYNSFPVNGARQSYLLSNGLQQQIARAARDGRLDKLAPVLTFQSVMDSTVST RAVIRALYNELPANGSELVLFDVNRTVNFGPLLRPNAAAAVSQLLPAPPRRYQTTVIANASPDSSEAIASVTPAGATTVS EQPLGMTYPADIYSLSHVALPFPVSDSLYGRFPVQRGEFGISLGTLAARGERSVLVVDLDSLMRIASNPFFPYLLQRIDS KL >Mature_481_residues PSRAIIKWTKRLTIVAVTVLLTLFAVRVYDTQSGPALEPWHTFVPHELSAAEMDNTDWQGYLAAESRVFDEVKVNVTDKL SASERIPLNRYFDGSPVYPEHFTRDWNRSYELMPEGEPRGAVVLLHGLTDSPYSLRHIAENYRQHGYVAVGIRLPAHGTV PGALTDIEWQDWLAATRLAVREARSKAGGDKPLHIVGFSNGGALAMKYALDALDDPQLAAPQRLILISPMIGVTSFARFA GIAGWPAVFPAFAKAAWLGVLPEFNPFKYNSFPVNGARQSYLLSNGLQQQIARAARDGRLDKLAPVLTFQSVMDSTVSTR AVIRALYNELPANGSELVLFDVNRTVNFGPLLRPNAAAAVSQLLPAPPRRYQTTVIANASPDSSEAIASVTPAGATTVSE QPLGMTYPADIYSLSHVALPFPVSDSLYGRFPVQRGEFGISLGTLAARGERSVLVVDLDSLMRIASNPFFPYLLQRIDSK L
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52758; Mature: 52627
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRAIIKWTKRLTIVAVTVLLTLFAVRVYDTQSGPALEPWHTFVPHELSAAEMDNTDWQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHCCCCCCCHHHCCCCCCC GYLAAESRVFDEVKVNVTDKLSASERIPLNRYFDGSPVYPEHFTRDWNRSYELMPEGEPR EEEEHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEECCCCCCC GAVVLLHGLTDSPYSLRHIAENYRQHGYVAVGIRLPAHGTVPGALTDIEWQDWLAATRLA CEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH VREARSKAGGDKPLHIVGFSNGGALAMKYALDALDDPQLAAPQRLILISPMIGVTSFARF HHHHHHHCCCCCCEEEEEECCCCEEEEEEHHHCCCCCCCCCCCEEEEEECHHHHHHHHHH AGIAGWPAVFPAFAKAAWLGVLPEFNPFKYNSFPVNGARQSYLLSNGLQQQIARAARDGR HCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC LDKLAPVLTFQSVMDSTVSTRAVIRALYNELPANGSELVLFDVNRTVNFGPLLRPNAAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHH VSQLLPAPPRRYQTTVIANASPDSSEAIASVTPAGATTVSEQPLGMTYPADIYSLSHVAL HHHHCCCCCCCEEEEEEEECCCCCCCHHEEECCCCCCCCCCCCCCCCCCHHHHHHCCEEE PFPVSDSLYGRFPVQRGEFGISLGTLAARGERSVLVVDLDSLMRIASNPFFPYLLQRIDS CCCCCCCCCCCCCCCCCCCCEEHHHHHCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHC KL CC >Mature Secondary Structure PSRAIIKWTKRLTIVAVTVLLTLFAVRVYDTQSGPALEPWHTFVPHELSAAEMDNTDWQ CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHCCCCCCCHHHCCCCCCC GYLAAESRVFDEVKVNVTDKLSASERIPLNRYFDGSPVYPEHFTRDWNRSYELMPEGEPR EEEEHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEECCCCCCC GAVVLLHGLTDSPYSLRHIAENYRQHGYVAVGIRLPAHGTVPGALTDIEWQDWLAATRLA CEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH VREARSKAGGDKPLHIVGFSNGGALAMKYALDALDDPQLAAPQRLILISPMIGVTSFARF HHHHHHHCCCCCCEEEEEECCCCEEEEEEHHHCCCCCCCCCCCEEEEEECHHHHHHHHHH AGIAGWPAVFPAFAKAAWLGVLPEFNPFKYNSFPVNGARQSYLLSNGLQQQIARAARDGR HCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC LDKLAPVLTFQSVMDSTVSTRAVIRALYNELPANGSELVLFDVNRTVNFGPLLRPNAAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHH VSQLLPAPPRRYQTTVIANASPDSSEAIASVTPAGATTVSEQPLGMTYPADIYSLSHVAL HHHHCCCCCCCEEEEEEEECCCCCCCHHEEECCCCCCCCCCCCCCCCCCHHHHHHCCEEE PFPVSDSLYGRFPVQRGEFGISLGTLAARGERSVLVVDLDSLMRIASNPFFPYLLQRIDS CCCCCCCCCCCCCCCCCCCCEEHHHHHCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHC KL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA