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The map label for this gene is xylB [H]

Identifier: 157368346

GI number: 157368346

Start: 103226

End: 104677

Strand: Reverse

Name: xylB [H]

Synonym: Spro_0097

Alternate gene names: 157368346

Gene position: 104677-103226 (Counterclockwise)

Preceding gene: 157368347

Following gene: 157368345

Centisome position: 1.92

GC content: 64.67

Gene sequence:

>1452_bases
ATGTATATCGGCATCGACCTCGGCACGTCCGGCGTAAAAGTCATTTTGCTCAGTGAACAGGGCCAATTGCTCGCCAGCCA
CGGTGAGTCGCTGCCCATCTCCCGCCCTCATCCCTTATGGTCAGAGCAGGCCCCGCAGGACTGGTGGCACGCCACCGATC
GCGCCATGCTGGCGCTGGGCAAGCAACACAGCCTGCAACAGGTGAAGGCCATCGGTCTCAGCGGCCAGATGCACGGCGCC
ACGCTGTTGGACGCACGGCAACAGGTGCTACGCCCGGCCATTTTGTGGAATGACGGCAGAAGTGGCGCGCAATGCCTGGC
GCTGGAACAGGCGGTGCCGCAATCGCGGCAAATCACCGGTAACCTGATGATGCCGGGCTTCACCGCCCCTAAACTATTGT
GGGTGCAACAGCATGAACCCCAGGTGTTTGAGCGCATCGATAAGGTGCTGTTGCCCAAAGATTATTTACGCTGGTGCCTC
ACCGGCGACTTCGCCAGCGACATGTCGGACGCTGCCGGCACCGGCTGGCTAAACGTGGCGCAGCGCGACTGGAGCGCCGA
GATGCTGGCCGCCTGCGGCCTGACCCGCCGCCAGATGCCGCAACTGTTCGAGGGCAATCAGGTCACCGGGCAAACGCATA
CCGAACTGGCCCGGCGCTGGGGCATGTCCCCGGTACCTGTGGTGGCCGGTGGCGGCGATAATGCCGCCGGGGCGATCGGT
GTCGGGCTGTATCAGGCCGGGCAGGCGATGCTGTCGCTCGGTACCTCAGGGGTTTATTTTGCCGTCAGCGACGGCTTCCT
CAGCAACCCGGCCAGCGCGGTGCACAGTTTCTGCCATGCGCTGCCCGACACCTGGCACCTGATGTCGGTGACGCTCAGCG
CCGCCTCCTGTCTGGACTGGGTTTGCAAACTGACTAACGTCGAAGACGTCGCCACCCTGCTGCGCAATGTCGAACAGGCC
CCCCCGGCGGCGGCTCCGCTGTGGTTCCTGCCCTACCTGTCCGGCGAACGGACGCCGCATAACAATCCGAACGCCAAGGG
GGCATTCTGGGGCCTCACCCACCAACATGGCCCGAACGATCTGGCGCGTGCGGTGCTGGAAGGCGTCGGTTTTGCCCTGG
CAGAAGGCATGGATGTGCTGCACGCCAGCGGCCTGCAGCCCACCAGCATCACCCTGATTGGCGGTGGCGCACGTAGCCCG
TTCTGGCGGCAAATGCTGGCGGATATCAGTGGCCAGCGGCTGGAATACCGCACCGGCGGCGACGTCGGCCCGGCGCTGGG
GGCCGCGCGGCTGGCCCAAATCGCACTGAACCCGCAGCGCCCACTCGGCGAACTGCTGCCTGAGTTGCCGCTGGAGCAGG
TGCATACCCCTAATGCCGAGCGCCATCAGCAGTACGCCGAACAGCGCAGCACCTTCCGCGAACTCTATACTCGCTTGTTG
CCGCTGATGTAA

Upstream 100 bases:

>100_bases
CGTCAGCGGCCGCCAGGAACAGCTTGAAAACCTGATGAACCGCTATCTGTTCGGCTAACTGACCCCGCGCGGCACTCGCC
GCGCCTTTAAGGATCTTTCC

Downstream 100 bases:

>100_bases
AACCAGTGGGGGCATTAGCCCTGCCCCCTTATTATTGCCAAATCGAATAGTCGCCAGTGGCAAATGTCACTGCCAACCCG
CCAGCTCCTCTCCTAAATTG

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MYIGIDLGTSGVKVILLSEQGQLLASHGESLPISRPHPLWSEQAPQDWWHATDRAMLALGKQHSLQQVKAIGLSGQMHGA
TLLDARQQVLRPAILWNDGRSGAQCLALEQAVPQSRQITGNLMMPGFTAPKLLWVQQHEPQVFERIDKVLLPKDYLRWCL
TGDFASDMSDAAGTGWLNVAQRDWSAEMLAACGLTRRQMPQLFEGNQVTGQTHTELARRWGMSPVPVVAGGGDNAAGAIG
VGLYQAGQAMLSLGTSGVYFAVSDGFLSNPASAVHSFCHALPDTWHLMSVTLSAASCLDWVCKLTNVEDVATLLRNVEQA
PPAAAPLWFLPYLSGERTPHNNPNAKGAFWGLTHQHGPNDLARAVLEGVGFALAEGMDVLHASGLQPTSITLIGGGARSP
FWRQMLADISGQRLEYRTGGDVGPALGAARLAQIALNPQRPLGELLPELPLEQVHTPNAERHQQYAEQRSTFRELYTRLL
PLM

Sequences:

>Translated_483_residues
MYIGIDLGTSGVKVILLSEQGQLLASHGESLPISRPHPLWSEQAPQDWWHATDRAMLALGKQHSLQQVKAIGLSGQMHGA
TLLDARQQVLRPAILWNDGRSGAQCLALEQAVPQSRQITGNLMMPGFTAPKLLWVQQHEPQVFERIDKVLLPKDYLRWCL
TGDFASDMSDAAGTGWLNVAQRDWSAEMLAACGLTRRQMPQLFEGNQVTGQTHTELARRWGMSPVPVVAGGGDNAAGAIG
VGLYQAGQAMLSLGTSGVYFAVSDGFLSNPASAVHSFCHALPDTWHLMSVTLSAASCLDWVCKLTNVEDVATLLRNVEQA
PPAAAPLWFLPYLSGERTPHNNPNAKGAFWGLTHQHGPNDLARAVLEGVGFALAEGMDVLHASGLQPTSITLIGGGARSP
FWRQMLADISGQRLEYRTGGDVGPALGAARLAQIALNPQRPLGELLPELPLEQVHTPNAERHQQYAEQRSTFRELYTRLL
PLM
>Mature_483_residues
MYIGIDLGTSGVKVILLSEQGQLLASHGESLPISRPHPLWSEQAPQDWWHATDRAMLALGKQHSLQQVKAIGLSGQMHGA
TLLDARQQVLRPAILWNDGRSGAQCLALEQAVPQSRQITGNLMMPGFTAPKLLWVQQHEPQVFERIDKVLLPKDYLRWCL
TGDFASDMSDAAGTGWLNVAQRDWSAEMLAACGLTRRQMPQLFEGNQVTGQTHTELARRWGMSPVPVVAGGGDNAAGAIG
VGLYQAGQAMLSLGTSGVYFAVSDGFLSNPASAVHSFCHALPDTWHLMSVTLSAASCLDWVCKLTNVEDVATLLRNVEQA
PPAAAPLWFLPYLSGERTPHNNPNAKGAFWGLTHQHGPNDLARAVLEGVGFALAEGMDVLHASGLQPTSITLIGGGARSP
FWRQMLADISGQRLEYRTGGDVGPALGAARLAQIALNPQRPLGELLPELPLEQVHTPNAERHQQYAEQRSTFRELYTRLL
PLM

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI4504007, Length=434, Percent_Identity=23.5023041474654, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI189409120, Length=434, Percent_Identity=23.5023041474654, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI42794763, Length=436, Percent_Identity=23.394495412844, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI41393575, Length=429, Percent_Identity=22.3776223776224, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI164663828, Length=530, Percent_Identity=23.2075471698113, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI18860918, Length=469, Percent_Identity=26.0127931769723, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI164663830, Length=555, Percent_Identity=22.5225225225225, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1789987, Length=483, Percent_Identity=73.4989648033126, Blast_Score=713, Evalue=0.0,
Organism=Escherichia coli, GI1790005, Length=480, Percent_Identity=23.9583333333333, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1790361, Length=495, Percent_Identity=24.6464646464646, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1787789, Length=372, Percent_Identity=25.2688172043011, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1789168, Length=415, Percent_Identity=24.578313253012, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17535599, Length=447, Percent_Identity=24.3847874720358, Blast_Score=95, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6321633, Length=335, Percent_Identity=22.6865671641791, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI17864214, Length=472, Percent_Identity=22.2457627118644, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24655555, Length=505, Percent_Identity=22.5742574257426, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24655560, Length=505, Percent_Identity=22.5742574257426, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24655570, Length=505, Percent_Identity=22.5742574257426, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24655574, Length=505, Percent_Identity=22.5742574257426, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24655565, Length=505, Percent_Identity=22.5742574257426, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24654573, Length=413, Percent_Identity=23.0024213075061, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21357867, Length=535, Percent_Identity=22.6168224299065, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI19920476, Length=509, Percent_Identity=24.3614931237721, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24656367, Length=524, Percent_Identity=22.5190839694656, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21356607, Length=552, Percent_Identity=23.0072463768116, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24656372, Length=405, Percent_Identity=23.7037037037037, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 52400; Mature: 52400

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIGIDLGTSGVKVILLSEQGQLLASHGESLPISRPHPLWSEQAPQDWWHATDRAMLALG
CEEEEEECCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
KQHSLQQVKAIGLSGQMHGATLLDARQQVLRPAILWNDGRSGAQCLALEQAVPQSRQITG
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCC
NLMMPGFTAPKLLWVQQHEPQVFERIDKVLLPKDYLRWCLTGDFASDMSDAAGTGWLNVA
CEECCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCHHHH
QRDWSAEMLAACGLTRRQMPQLFEGNQVTGQTHTELARRWGMSPVPVVAGGGDNAAGAIG
HCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCHHH
VGLYQAGQAMLSLGTSGVYFAVSDGFLSNPASAVHSFCHALPDTWHLMSVTLSAASCLDW
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VCKLTNVEDVATLLRNVEQAPPAAAPLWFLPYLSGERTPHNNPNAKGAFWGLTHQHGPND
HHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHH
LARAVLEGVGFALAEGMDVLHASGLQPTSITLIGGGARSPFWRQMLADISGQRLEYRTGG
HHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCC
DVGPALGAARLAQIALNPQRPLGELLPELPLEQVHTPNAERHQQYAEQRSTFRELYTRLL
CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
PLM
CCC
>Mature Secondary Structure
MYIGIDLGTSGVKVILLSEQGQLLASHGESLPISRPHPLWSEQAPQDWWHATDRAMLALG
CEEEEEECCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
KQHSLQQVKAIGLSGQMHGATLLDARQQVLRPAILWNDGRSGAQCLALEQAVPQSRQITG
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCC
NLMMPGFTAPKLLWVQQHEPQVFERIDKVLLPKDYLRWCLTGDFASDMSDAAGTGWLNVA
CEECCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCHHHH
QRDWSAEMLAACGLTRRQMPQLFEGNQVTGQTHTELARRWGMSPVPVVAGGGDNAAGAIG
HCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCHHH
VGLYQAGQAMLSLGTSGVYFAVSDGFLSNPASAVHSFCHALPDTWHLMSVTLSAASCLDW
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VCKLTNVEDVATLLRNVEQAPPAAAPLWFLPYLSGERTPHNNPNAKGAFWGLTHQHGPND
HHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHH
LARAVLEGVGFALAEGMDVLHASGLQPTSITLIGGGARSPFWRQMLADISGQRLEYRTGG
HHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCC
DVGPALGAARLAQIALNPQRPLGELLPELPLEQVHTPNAERHQQYAEQRSTFRELYTRLL
CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
PLM
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]