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The map label for this gene is yahJ [H]

Identifier: 157368345

GI number: 157368345

Start: 101685

End: 103079

Strand: Reverse

Name: yahJ [H]

Synonym: Spro_0096

Alternate gene names: 157368345

Gene position: 103079-101685 (Counterclockwise)

Preceding gene: 157368346

Following gene: 157368344

Centisome position: 1.89

GC content: 60.07

Gene sequence:

>1395_bases
GTGGAAAAAAACCAACAACAAAGCCGCAGAGCTTTCCTCAGCCAAACCGGCAAAATCACCACTGCCTGCGCGGTGATCGG
CCTGACCGGCGGCGTGGCGCAGGCCGCCGTCCCCACTGGCAGCCCTTGTTTACCGGAGGCCCAACCCATGACCCTGACCG
ACAGCCACTACTGGCTGAGCGATGTGCGGCTGGAAGAGGGTTTCGAGTACGATGGCGACACGGTGATCGGCACCCGCACC
GCGCTCTATCAGCTTGAAATCAAAGACGGCAAGATTGCGGCCATCCACCCGAAGGATGCCGCGGCCCCCGCTGGCGTACC
GCGCTATCAAGCACAGGGCCAGTTACTGTTACCGGCATTTCGCGACATGCATATCCATCTGGATAAAACCTTTTACAGCG
GCCCATGGCAGGCACCGCGCCCGCGCCAGGGCAAAACCATCATGGATATGATCGCGCTGGAACAAACATTAATCCCCAAA
CTGTTGCCCACCTCGCAACAGCGCGCAGAAAACCTGATCGCCCTGCTGCAATCCAAAGGCAGCACAGTGGCGCGCAGCCA
CTGCAATATCGATCCGGTCAGCGGGCTGAAAAGCCTGGAACACCTGCAGCGCGCACTGGAAAATCACCGGGCAGATTTTA
GCTGTGAAATCGTCGCCTTCCCGCAGCACGGGCTGCTGCATTCCAAAGTCGACGGCTTGATGCGCGAAGCCATGCAGATG
GGAGTGCAATACGTTGGCGGGCTGGATCCGACCAATGTCGACGGGGCGATGGAGCAGTCGCTGGATGCCATGTTCCAGAT
TGCGCTCGATACCGGCAAAGGCGTCGATATCCACCTGCACGAAACCAGCCCGGCCGGGGTGGCAGCCATCAACTACATGA
TTACCACCGTAGAAAAGAACCCTTCGCTACGCGGCAAAGTCACCATCAGCCATGCCTTTGCCCTGACCGCGCTGAACCCG
AATGAATTAGAGGAAACCGCCACCCGACTGGCGGCGCAGCAAATCACCATCGCCTCGACGGTGCCGATCGGTGGGTTGAT
GATGCCACTGCCGCAGCTCAGTGAAAAAGGGGTATTTGTGATGACCGGAACCGACAGCGTGATCGACCATTGGTCACCGT
TCGGCACCGGCGATATTCTGGAAAAAGCCAACCTTTACGCCCAGCTCTATCGGGGTTCCGACGAGTTCCATCTGTCGCGC
GCCATGGCGATTTCCACCGGCGGCGTGCTGCCGCTGAATGACAAAGGCCAACGGGTGTGGCCCAAAGCCGGGGACAGCGC
GGAGTTCGTGTTGATCGACGCCAGTTGCTCCGCCGAAGCGGTAGCCCGTCTGCCAACGCGCCGCACCACCTTCCATCAAG
GGCGGCTGGTGGCCGGCCAGGTTGGCAAAGCCTGA

Upstream 100 bases:

>100_bases
ATAGTCGCCAGTGGCAAATGTCACTGCCAACCCGCCAGCTCCTCTCCTAAATTGGTGGCTGTCTTTTGACGCACTTCACC
TCTGGATTAAGGAACTGAAC

Downstream 100 bases:

>100_bases
TGCTGGTCCGCTAATGCCACCATGATGGCCGTTTTTGGCCTTCTCCCTTGCAGAATAACGGCTCAGTATGGCGTTATACC
TAATTGGCGGAGGGCCGAAA

Product: putative deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MEKNQQQSRRAFLSQTGKITTACAVIGLTGGVAQAAVPTGSPCLPEAQPMTLTDSHYWLSDVRLEEGFEYDGDTVIGTRT
ALYQLEIKDGKIAAIHPKDAAAPAGVPRYQAQGQLLLPAFRDMHIHLDKTFYSGPWQAPRPRQGKTIMDMIALEQTLIPK
LLPTSQQRAENLIALLQSKGSTVARSHCNIDPVSGLKSLEHLQRALENHRADFSCEIVAFPQHGLLHSKVDGLMREAMQM
GVQYVGGLDPTNVDGAMEQSLDAMFQIALDTGKGVDIHLHETSPAGVAAINYMITTVEKNPSLRGKVTISHAFALTALNP
NELEETATRLAAQQITIASTVPIGGLMMPLPQLSEKGVFVMTGTDSVIDHWSPFGTGDILEKANLYAQLYRGSDEFHLSR
AMAISTGGVLPLNDKGQRVWPKAGDSAEFVLIDASCSAEAVARLPTRRTTFHQGRLVAGQVGKA

Sequences:

>Translated_464_residues
MEKNQQQSRRAFLSQTGKITTACAVIGLTGGVAQAAVPTGSPCLPEAQPMTLTDSHYWLSDVRLEEGFEYDGDTVIGTRT
ALYQLEIKDGKIAAIHPKDAAAPAGVPRYQAQGQLLLPAFRDMHIHLDKTFYSGPWQAPRPRQGKTIMDMIALEQTLIPK
LLPTSQQRAENLIALLQSKGSTVARSHCNIDPVSGLKSLEHLQRALENHRADFSCEIVAFPQHGLLHSKVDGLMREAMQM
GVQYVGGLDPTNVDGAMEQSLDAMFQIALDTGKGVDIHLHETSPAGVAAINYMITTVEKNPSLRGKVTISHAFALTALNP
NELEETATRLAAQQITIASTVPIGGLMMPLPQLSEKGVFVMTGTDSVIDHWSPFGTGDILEKANLYAQLYRGSDEFHLSR
AMAISTGGVLPLNDKGQRVWPKAGDSAEFVLIDASCSAEAVARLPTRRTTFHQGRLVAGQVGKA
>Mature_464_residues
MEKNQQQSRRAFLSQTGKITTACAVIGLTGGVAQAAVPTGSPCLPEAQPMTLTDSHYWLSDVRLEEGFEYDGDTVIGTRT
ALYQLEIKDGKIAAIHPKDAAAPAGVPRYQAQGQLLLPAFRDMHIHLDKTFYSGPWQAPRPRQGKTIMDMIALEQTLIPK
LLPTSQQRAENLIALLQSKGSTVARSHCNIDPVSGLKSLEHLQRALENHRADFSCEIVAFPQHGLLHSKVDGLMREAMQM
GVQYVGGLDPTNVDGAMEQSLDAMFQIALDTGKGVDIHLHETSPAGVAAINYMITTVEKNPSLRGKVTISHAFALTALNP
NELEETATRLAAQQITIASTVPIGGLMMPLPQLSEKGVFVMTGTDSVIDHWSPFGTGDILEKANLYAQLYRGSDEFHLSR
AMAISTGGVLPLNDKGQRVWPKAGDSAEFVLIDASCSAEAVARLPTRRTTFHQGRLVAGQVGKA

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786517, Length=459, Percent_Identity=62.962962962963, Blast_Score=584, Evalue=1e-168,
Organism=Escherichia coli, GI1786531, Length=420, Percent_Identity=23.5714285714286, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50163; Mature: 50163

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNQQQSRRAFLSQTGKITTACAVIGLTGGVAQAAVPTGSPCLPEAQPMTLTDSHYWLS
CCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCEEECCCCEEE
DVRLEEGFEYDGDTVIGTRTALYQLEIKDGKIAAIHPKDAAAPAGVPRYQAQGQLLLPAF
HEEHHCCCCCCCCEEEECEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEECC
RDMHIHLDKTFYSGPWQAPRPRQGKTIMDMIALEQTLIPKLLPTSQQRAENLIALLQSKG
CCEEEEEECEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
STVARSHCNIDPVSGLKSLEHLQRALENHRADFSCEIVAFPQHGLLHSKVDGLMREAMQM
CEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
GVQYVGGLDPTNVDGAMEQSLDAMFQIALDTGKGVDIHLHETSPAGVAAINYMITTVEKN
HHHHHCCCCCCCCCHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCEEEEEEEEEEECC
PSLRGKVTISHAFALTALNPNELEETATRLAAQQITIASTVPIGGLMMPLPQLSEKGVFV
CCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEE
MTGTDSVIDHWSPFGTGDILEKANLYAQLYRGSDEFHLSRAMAISTGGVLPLNDKGQRVW
EECCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCEEEECCCCCEEC
PKAGDSAEFVLIDASCSAEAVARLPTRRTTFHQGRLVAGQVGKA
CCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MEKNQQQSRRAFLSQTGKITTACAVIGLTGGVAQAAVPTGSPCLPEAQPMTLTDSHYWLS
CCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCEEECCCCEEE
DVRLEEGFEYDGDTVIGTRTALYQLEIKDGKIAAIHPKDAAAPAGVPRYQAQGQLLLPAF
HEEHHCCCCCCCCEEEECEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEECC
RDMHIHLDKTFYSGPWQAPRPRQGKTIMDMIALEQTLIPKLLPTSQQRAENLIALLQSKG
CCEEEEEECEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
STVARSHCNIDPVSGLKSLEHLQRALENHRADFSCEIVAFPQHGLLHSKVDGLMREAMQM
CEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
GVQYVGGLDPTNVDGAMEQSLDAMFQIALDTGKGVDIHLHETSPAGVAAINYMITTVEKN
HHHHHCCCCCCCCCHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCEEEEEEEEEEECC
PSLRGKVTISHAFALTALNPNELEETATRLAAQQITIASTVPIGGLMMPLPQLSEKGVFV
CCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEE
MTGTDSVIDHWSPFGTGDILEKANLYAQLYRGSDEFHLSRAMAISTGGVLPLNDKGQRVW
EECCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCEEEECCCCCEEC
PKAGDSAEFVLIDASCSAEAVARLPTRRTTFHQGRLVAGQVGKA
CCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]