| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368344
Identifier: 157368344
GI number: 157368344
Start: 101033
End: 101584
Strand: Reverse
Name: 157368344
Synonym: Spro_0095
Alternate gene names: NA
Gene position: 101584-101033 (Counterclockwise)
Preceding gene: 157368345
Following gene: 157368343
Centisome position: 1.86
GC content: 57.07
Gene sequence:
>552_bases ATGTCACATAGCGCGTTATTGATCATCGATGTTCAACAATCATTTCAGCATCGTCCATTCTGGCAAGAGCAGGATCTCCC CGCTTTCCAACAGGCGCTGACGCGGCTGATTGAAGGCTGCCGCCAGCAGGGCGTAGCGCTGGTTGATGTATTTCATGTAT CGCCAGAGGGGCCATTTTCGTTGGCGTCCGGCTGGGTAAAGCGCCTGCCGTTCCTCGACCATCAGGCCGATGTCACCGTA CACAAACAGGTGCACAACGCGCTGACCGAATCCGGCCTGGATGCCTGGCTGCTGGAGCGACACATCAAGCATTTGATTAT TTGCGGCATTCGTACCGAACAGTGCTGTGAAACCACCACCCGGGTGGCGGCCGATCTCGGCTATCAGGTGACTTTCGTGA CCGAGGCCACGCTGACTTTCCCGATGCAGCATCCCGATGGAGAAGTCTTTACCACCGAACAACTCAAGCGGCATACTGAG ACGGTGCTGGTCGACCGCTTCGCCCGCATCGCCAGCGTGGATGAGGCTCTGGCGCAACTCTCACAGGAGTAA
Upstream 100 bases:
>100_bases TGCTGGTCCGCTAATGCCACCATGATGGCCGTTTTTGGCCTTCTCCCTTGCAGAATAACGGCTCAGTATGGCGTTATACC TAATTGGCGGAGGGCCGAAA
Downstream 100 bases:
>100_bases CCATGCCGCAGGCCGTCTACTTTCTGATGTTGCCCCAGGTGCTGTCGCTGGACGTTAGCGGCCCGGCCGAAACCCTGCGC CTGGCCGGGCAGTTCGGCCT
Product: isochorismatase hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSHSALLIIDVQQSFQHRPFWQEQDLPAFQQALTRLIEGCRQQGVALVDVFHVSPEGPFSLASGWVKRLPFLDHQADVTV HKQVHNALTESGLDAWLLERHIKHLIICGIRTEQCCETTTRVAADLGYQVTFVTEATLTFPMQHPDGEVFTTEQLKRHTE TVLVDRFARIASVDEALAQLSQE
Sequences:
>Translated_183_residues MSHSALLIIDVQQSFQHRPFWQEQDLPAFQQALTRLIEGCRQQGVALVDVFHVSPEGPFSLASGWVKRLPFLDHQADVTV HKQVHNALTESGLDAWLLERHIKHLIICGIRTEQCCETTTRVAADLGYQVTFVTEATLTFPMQHPDGEVFTTEQLKRHTE TVLVDRFARIASVDEALAQLSQE >Mature_182_residues SHSALLIIDVQQSFQHRPFWQEQDLPAFQQALTRLIEGCRQQGVALVDVFHVSPEGPFSLASGWVKRLPFLDHQADVTVH KQVHNALTESGLDAWLLERHIKHLIICGIRTEQCCETTTRVAADLGYQVTFVTEATLTFPMQHPDGEVFTTEQLKRHTET VLVDRFARIASVDEALAQLSQE
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000868 [H]
Pfam domain/function: PF00857 Isochorismatase [H]
EC number: NA
Molecular weight: Translated: 20712; Mature: 20581
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSALLIIDVQQSFQHRPFWQEQDLPAFQQALTRLIEGCRQQGVALVDVFHVSPEGPFS CCCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHH LASGWVKRLPFLDHQADVTVHKQVHNALTESGLDAWLLERHIKHLIICGIRTEQCCETTT HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH RVAADLGYQVTFVTEATLTFPMQHPDGEVFTTEQLKRHTETVLVDRFARIASVDEALAQL HHHHHCCCEEEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQE HCC >Mature Secondary Structure SHSALLIIDVQQSFQHRPFWQEQDLPAFQQALTRLIEGCRQQGVALVDVFHVSPEGPFS CCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHH LASGWVKRLPFLDHQADVTVHKQVHNALTESGLDAWLLERHIKHLIICGIRTEQCCETTT HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH RVAADLGYQVTFVTEATLTFPMQHPDGEVFTTEQLKRHTETVLVDRFARIASVDEALAQL HHHHHCCCEEEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQE HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA