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The map label for this gene is lip-1 [H]

Identifier: 157368314

GI number: 157368314

Start: 64387

End: 66375

Strand: Direct

Name: lip-1 [H]

Synonym: Spro_0065

Alternate gene names: 157368314

Gene position: 64387-66375 (Clockwise)

Preceding gene: 157368305

Following gene: 157368315

Centisome position: 1.18

GC content: 59.98

Gene sequence:

>1989_bases
ATGCCTCTAAAAATAACTCGTATGCCCCGCCCGGCGGTGCTTGCAGTGGCAATATTATGCAGTATGACGACCTCAGCGCT
GGCCTACGACCAACTCTACGTCTTCGGCGACAGTCTGAGCGACACCGGCAACAATGGCCGCTTTACCTACGACAGCAATA
AACATCTGTTATACGACGAAGTGCTGGCGCAACGTATTGGTGCCGCGCTGGTGGCATCGGATAACGGCGGTGACAACTAT
GCCGCGGGTGGTGGCGTGGCGGTACCGGCGCTTAACCCGGCGGATAACACTCAGGATCAGGTGCAGAGCTACCTCAACCG
GGTCAATGGCCGGGCCGATGGTGATGGGCTGTATATTCACTGGATTGGTGGCAACGACCTGGCGGCGGCGGCGTTAAATC
CGACGACTGCGCCGGGTGTGGCCTACAACAGTGCGGCCGCCGCTGCAGCGCAGGTTCACTCGTTGTTAAATGCCGGTGCC
GGAACGGTGATTGTCCCGACGGTGCCGAATATTGGCTCTACGCCGCAGCTGATGGAGCTGATTATCCAACAGGCGCTGAC
GCCGGTGCAAAACGCGGCAGTGCAGGCGGCCTACGCCACCCTGAATTCGCTGGCGACCCCGGACAATGACTCGCGAACTC
AGGCCATCCACCAGGCGCTGACGGCCGCTGCGGCGCAGGGCAGTACCATCCCGCAGGTGCAGCAGGCGATTGCCGCACAG
CTGATTGCTGCCTTTGACAGCCTGAGTGCTCAGGCCGGGCAACTGACCGATTTTTATAACCAGAACGAAGACCGCCTGCT
GGCACTGGGCAGCGGCAATATCGTTCGGGTTGATGTCAACAAACTGTTTAGCGAGGCGATTGCCAATCCGGCGCAGTTTG
GCTTTACCAATACCGCCGGTATGGCCTGCCCGCCGGGCGTTTCTTCAGCTGTGTGCAGCTCCGCCATGCCGGGTTTTGAC
AGCAGCCAATCCTATCTGTTTGCCGATCATTTCCACCCCAGCCCGCAGGCACATCAACTGATCGCCGATTACATTCAGGC
GGTGCTGGACGGCCCGGCGCAGGTGGTGGCGCTGAATCAGGCGACGGCGGCCATGGCGCGTGACAGCCGCGCTACCCTCG
ACAGCCGTTTCCAACAGTTGCGCAATGGCGGCAATCCGCAAGGGGCGCTGGGCGTGTTCGGCGGTTATGCCGGACAACAC
TATGACTATTCAGCCAATCTGGCGGCAGGTGACGGCAACGCCACCACCCATAATCTGACGGTCGGGGTGGATTACCAGTT
GACCGACGGCTGGTTAATTGGGGCGCTGATTTCCGGTTCCAATGACGATCAGCAGCCTTCCAGCCGCTACGACTATAAGG
CGCGTGGCCTGCTGTTCTCGGCCTTTACCGCCCTGGACGTGTTTGAGCACGGTTGGGTGAACGCCGATCTGCATTACGCG
ACAATGGATTACGATGATATTCGCCGCAGCATGCAGCTAGGGTCGTTAACCCGCACCGAAACCGGCAGCACCGACGGTAA
ACAGTGGGGCGCAAGGGTCACCGCCGGTTATGACTTCCCCGTGACCTCCTACCTGACCACCGGGCCGATGGCGCAGTTCG
CCTGGGATTACAGTAACGTCTCCGGTTACAGCGAGGACGGCAACGACAGCACCGCCATGAGGTTTAACGACCAGACCTAC
CATTCGCAGATTGGTGCGCTGGGCTGGCGGTTAGACAGCAATTTCGGCCTGTTTAACCTGTACGCCGAGGTGAGTTATCA
GCATCAGTTTGGCGATGATGTCTATCGGGCCGGCGGCGGCCTGAAGTCCACCCAGACCTCTTTTACCCGCGACAGCGCCA
ATCAGGATAAAAACTGGCTGGATGTGACGCTGGGGGCGAACATGCCGCTGACCGATCAGGTGGCCGCGTTCGCCACCGTT
TCGCAGACCGGCGGCCTGAGCAGCGGCGAACAGTTTATGTATAACGTCGGCGTCAGTGCGCGGTTTTGA

Upstream 100 bases:

>100_bases
GGCGAAAAAGCCAGCAATATTTACTAGATGGCCGGTAGCCAAAAAGGCCAATGATAAAAATGTATTTTCCTTCATTTGCT
TGGCTCTCAGGAGTCTGTTC

Downstream 100 bases:

>100_bases
GTGGTTGATATATCAGTAAGGGGCCCGGACATCTGGCCCATAATCAATACCGGTTGATGTGGCGGATCGCAGATATAACG
GTATGTTGATGCTGGCCAAT

Product: outer membrane autotransporter

Products: NA

Alternate protein names: Triacylglycerol lipase [H]

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MPLKITRMPRPAVLAVAILCSMTTSALAYDQLYVFGDSLSDTGNNGRFTYDSNKHLLYDEVLAQRIGAALVASDNGGDNY
AAGGGVAVPALNPADNTQDQVQSYLNRVNGRADGDGLYIHWIGGNDLAAAALNPTTAPGVAYNSAAAAAAQVHSLLNAGA
GTVIVPTVPNIGSTPQLMELIIQQALTPVQNAAVQAAYATLNSLATPDNDSRTQAIHQALTAAAAQGSTIPQVQQAIAAQ
LIAAFDSLSAQAGQLTDFYNQNEDRLLALGSGNIVRVDVNKLFSEAIANPAQFGFTNTAGMACPPGVSSAVCSSAMPGFD
SSQSYLFADHFHPSPQAHQLIADYIQAVLDGPAQVVALNQATAAMARDSRATLDSRFQQLRNGGNPQGALGVFGGYAGQH
YDYSANLAAGDGNATTHNLTVGVDYQLTDGWLIGALISGSNDDQQPSSRYDYKARGLLFSAFTALDVFEHGWVNADLHYA
TMDYDDIRRSMQLGSLTRTETGSTDGKQWGARVTAGYDFPVTSYLTTGPMAQFAWDYSNVSGYSEDGNDSTAMRFNDQTY
HSQIGALGWRLDSNFGLFNLYAEVSYQHQFGDDVYRAGGGLKSTQTSFTRDSANQDKNWLDVTLGANMPLTDQVAAFATV
SQTGGLSSGEQFMYNVGVSARF

Sequences:

>Translated_662_residues
MPLKITRMPRPAVLAVAILCSMTTSALAYDQLYVFGDSLSDTGNNGRFTYDSNKHLLYDEVLAQRIGAALVASDNGGDNY
AAGGGVAVPALNPADNTQDQVQSYLNRVNGRADGDGLYIHWIGGNDLAAAALNPTTAPGVAYNSAAAAAAQVHSLLNAGA
GTVIVPTVPNIGSTPQLMELIIQQALTPVQNAAVQAAYATLNSLATPDNDSRTQAIHQALTAAAAQGSTIPQVQQAIAAQ
LIAAFDSLSAQAGQLTDFYNQNEDRLLALGSGNIVRVDVNKLFSEAIANPAQFGFTNTAGMACPPGVSSAVCSSAMPGFD
SSQSYLFADHFHPSPQAHQLIADYIQAVLDGPAQVVALNQATAAMARDSRATLDSRFQQLRNGGNPQGALGVFGGYAGQH
YDYSANLAAGDGNATTHNLTVGVDYQLTDGWLIGALISGSNDDQQPSSRYDYKARGLLFSAFTALDVFEHGWVNADLHYA
TMDYDDIRRSMQLGSLTRTETGSTDGKQWGARVTAGYDFPVTSYLTTGPMAQFAWDYSNVSGYSEDGNDSTAMRFNDQTY
HSQIGALGWRLDSNFGLFNLYAEVSYQHQFGDDVYRAGGGLKSTQTSFTRDSANQDKNWLDVTLGANMPLTDQVAAFATV
SQTGGLSSGEQFMYNVGVSARF
>Mature_661_residues
PLKITRMPRPAVLAVAILCSMTTSALAYDQLYVFGDSLSDTGNNGRFTYDSNKHLLYDEVLAQRIGAALVASDNGGDNYA
AGGGVAVPALNPADNTQDQVQSYLNRVNGRADGDGLYIHWIGGNDLAAAALNPTTAPGVAYNSAAAAAAQVHSLLNAGAG
TVIVPTVPNIGSTPQLMELIIQQALTPVQNAAVQAAYATLNSLATPDNDSRTQAIHQALTAAAAQGSTIPQVQQAIAAQL
IAAFDSLSAQAGQLTDFYNQNEDRLLALGSGNIVRVDVNKLFSEAIANPAQFGFTNTAGMACPPGVSSAVCSSAMPGFDS
SQSYLFADHFHPSPQAHQLIADYIQAVLDGPAQVVALNQATAAMARDSRATLDSRFQQLRNGGNPQGALGVFGGYAGQHY
DYSANLAAGDGNATTHNLTVGVDYQLTDGWLIGALISGSNDDQQPSSRYDYKARGLLFSAFTALDVFEHGWVNADLHYAT
MDYDDIRRSMQLGSLTRTETGSTDGKQWGARVTAGYDFPVTSYLTTGPMAQFAWDYSNVSGYSEDGNDSTAMRFNDQTYH
SQIGALGWRLDSNFGLFNLYAEVSYQHQFGDDVYRAGGGLKSTQTSFTRDSANQDKNWLDVTLGANMPLTDQVAAFATVS
QTGGLSSGEQFMYNVGVSARF

Specific function: Unknown

COG id: COG3240

COG function: function code IR; Phospholipase/lecithinase/hemolysin

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI87082287, Length=150, Percent_Identity=36.6666666666667, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR013830
- InterPro:   IPR017186
- InterPro:   IPR001087
- InterPro:   IPR008265
- InterPro:   IPR006315 [H]

Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]

EC number: =3.1.1.3 [H]

Molecular weight: Translated: 70107; Mature: 69976

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS01098 LIPASE_GDSL_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLKITRMPRPAVLAVAILCSMTTSALAYDQLYVFGDSLSDTGNNGRFTYDSNKHLLYDE
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEECCCCCCHHHH
VLAQRIGAALVASDNGGDNYAAGGGVAVPALNPADNTQDQVQSYLNRVNGRADGDGLYIH
HHHHHHCEEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
WIGGNDLAAAALNPTTAPGVAYNSAAAAAAQVHSLLNAGAGTVIVPTVPNIGSTPQLMEL
EECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHH
IIQQALTPVQNAAVQAAYATLNSLATPDNDSRTQAIHQALTAAAAQGSTIPQVQQAIAAQ
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LIAAFDSLSAQAGQLTDFYNQNEDRLLALGSGNIVRVDVNKLFSEAIANPAQFGFTNTAG
HHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCEEEEEHHHHHHHHHCCCHHCCCCCCCC
MACPPGVSSAVCSSAMPGFDSSQSYLFADHFHPSPQAHQLIADYIQAVLDGPAQVVALNQ
CCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECH
ATAAMARDSRATLDSRFQQLRNGGNPQGALGVFGGYAGQHYDYSANLAAGDGNATTHNLT
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEEEEE
VGVDYQLTDGWLIGALISGSNDDQQPSSRYDYKARGLLFSAFTALDVFEHGWVNADLHYA
EEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE
TMDYDDIRRSMQLGSLTRTETGSTDGKQWGARVTAGYDFPVTSYLTTGPMAQFAWDYSNV
ECCHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEECCCCCHHHHHCCCCHHHHEECCCCC
SGYSEDGNDSTAMRFNDQTYHSQIGALGWRLDSNFGLFNLYAEVSYQHQFGDDVYRAGGG
CCCCCCCCCCCEEEECCHHHHHHHHHHEEEECCCCCEEEEEEEEEECHHCCCHHHHCCCC
LKSTQTSFTRDSANQDKNWLDVTLGANMPLTDQVAAFATVSQTGGLSSGEQFMYNVGVSA
CCCCCCHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
RF
CC
>Mature Secondary Structure 
PLKITRMPRPAVLAVAILCSMTTSALAYDQLYVFGDSLSDTGNNGRFTYDSNKHLLYDE
CEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEECCCCCCHHHH
VLAQRIGAALVASDNGGDNYAAGGGVAVPALNPADNTQDQVQSYLNRVNGRADGDGLYIH
HHHHHHCEEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
WIGGNDLAAAALNPTTAPGVAYNSAAAAAAQVHSLLNAGAGTVIVPTVPNIGSTPQLMEL
EECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHH
IIQQALTPVQNAAVQAAYATLNSLATPDNDSRTQAIHQALTAAAAQGSTIPQVQQAIAAQ
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LIAAFDSLSAQAGQLTDFYNQNEDRLLALGSGNIVRVDVNKLFSEAIANPAQFGFTNTAG
HHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCEEEEEHHHHHHHHHCCCHHCCCCCCCC
MACPPGVSSAVCSSAMPGFDSSQSYLFADHFHPSPQAHQLIADYIQAVLDGPAQVVALNQ
CCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECH
ATAAMARDSRATLDSRFQQLRNGGNPQGALGVFGGYAGQHYDYSANLAAGDGNATTHNLT
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEEEEE
VGVDYQLTDGWLIGALISGSNDDQQPSSRYDYKARGLLFSAFTALDVFEHGWVNADLHYA
EEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE
TMDYDDIRRSMQLGSLTRTETGSTDGKQWGARVTAGYDFPVTSYLTTGPMAQFAWDYSNV
ECCHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEECCCCCHHHHHCCCCHHHHEECCCCC
SGYSEDGNDSTAMRFNDQTYHSQIGALGWRLDSNFGLFNLYAEVSYQHQFGDDVYRAGGG
CCCCCCCCCCCEEEECCHHHHHHHHHHEEEECCCCCEEEEEEEEEECHHCCCHHHHCCCC
LKSTQTSFTRDSANQDKNWLDVTLGANMPLTDQVAAFATVSQTGGLSSGEQFMYNVGVSA
CCCCCCHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
RF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8449874 [H]